MC10g_new0347 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g_new0347
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 17094247 .. 17094649 (-)
RNA-Seq ExpressionMC10g_new0347
SyntenyMC10g_new0347
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATGGTGGCCGGGTGTTGGGGATGTACCCCTTGGATGTTGATAGTGTCGTTGCGCTTAACAAAATCAAAGGCAATATTGTTATGTATGATTTGCGATTTTGTCATTGTTTTGAAGAGTTATTAAACATAGAATTTGAGAGGGCATCCGCCTGCGATCTCTTAGGATGACTTTTCATTTTCGTTACATCTTGGTTCAAATAACTTCGATGGTCCAGGGGCAAGGAAGACCGAGCAAAAGGTGGGCGACGACGATAATCGGCTCAAACACCATTTGGAATATGGGGATGCGATTAGTCTTAATTATATTAAAATTCGTGACCAGTGTGATTTGGAGAATTTGTCTAATCCTTCCTTACATGTCATGACGAAGAATAAGACAACCTTGGAGGCGATTTGA

mRNA sequence

ATGGCGGATGGTGGCCGGGTGTTGGGGATGTACCCCTTGGATGTTGATAGTGTCGTTGCGCTTAACAAAATCAAAGGCAATATTGTTATGTATGATTTGCGATTTTGGGCAAGGAAGACCGAGCAAAAGGTGGGCGACGACGATAATCGGCTCAAACACCATTTGGAATATGGGGATGCGATTAGTCTTAATTATATTAAAATTCGTGACCAGTGTGATTTGGAGAATTTGTCTAATCCTTCCTTACATGTCATGACGAAGAATAAGACAACCTTGGAGGCGATTTGA

Coding sequence (CDS)

ATGGCGGATGGTGGCCGGGTGTTGGGGATGTACCCCTTGGATGTTGATAGTGTCGTTGCGCTTAACAAAATCAAAGGCAATATTGTTATGTATGATTTGCGATTTTGGGCAAGGAAGACCGAGCAAAAGGTGGGCGACGACGATAATCGGCTCAAACACCATTTGGAATATGGGGATGCGATTAGTCTTAATTATATTAAAATTCGTGACCAGTGTGATTTGGAGAATTTGTCTAATCCTTCCTTACATGTCATGACGAAGAATAAGACAACCTTGGAGGCGATTTGA

Protein sequence

MADGGRVLGMYPLDVDSVVALNKIKGNIVMYDLRFWARKTEQKVGDDDNRLKHHLEYGDAISLNYIKIRDQCDLENLSNPSLHVMTKNKTTLEAI
Homology
[Close]
BLAST of MC10g_new0347 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 2.16e-12
Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = 0 

Query: 1   MADGGRVLGMYPLDVDSVVALNKIKGNIVMYD-------------LRFWARKTEQKVGDD 60
           MAD   +  + PLD +S V ++KIK NIVMY               + W R  EQKVGDD
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 61  DNR--LKHHLEYG--DAISLNYIKIRDQCDLENLSNPSLHVMTKNKTTLEAI 95
                +K +   G  + I+LN ++I  Q D  NLSNPSL V  ++KTT + I
Sbjct: 61  GGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTI 112

[Close]
BLAST of MC10g_new0347 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.05e-12
Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = 0 

Query: 1   MADGGRVLGMYPLDVDSVVALNKIKGNIVMYD-------------LRFWARKTEQKVGDD 60
           MAD   +  + PLD +S V ++KIK NIVMY               + W R  EQKVGDD
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 61  DNR--LKHHLEYG--DAISLNYIKIRDQCDLENLSNPSLHVMTKNKTTLEAI 95
                +K +   G  + I+LN ++I  Q D  NLSNPSL V  ++KTT + I
Sbjct: 61  GGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTI 112

The following BLAST results are available for this feature:
BLAST of MC10g_new0347 vs.
Match NameE-valueIdentityDescription
BLAST of MC10g_new0347 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.12.16e-1240.18uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of MC10g_new0347 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ21.05e-1240.18uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of MC10g_new0347 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g_new0347.1MC10g_new0347.1mRNA