MC10g_new0255 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g_new0255
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC10: 11662144 .. 11662698 (-)
RNA-Seq Expression	MC10g_new0255
Synteny	MC10g_new0255

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGACAGAAGCAGTTTCCCGCGATAGCAAGATCTCCAAACTGGAGCCGCGCCTCTCGGAAGCTGAGAATGAGCTTCTCAAAGCCAAGGAGGGGCGGGTCATGGCTGAATCCGACCTGTCAAGGTATAGGGAGGCTGAAAACATCTCTTTGGATTCTCTAGGGTGGGAGTCCGTTTGGGCTGCCAACTTTGAGGTTGCCTAGCTGATACGAAGTGCTCCCTTCCCCAATCCCAGGAAGGATTGCAGTCGGCCAAGACGATCTTGGACAAGCCAGAGCTCTTGAAGTCCCACTTCGCGGCTCTGCCTGCTTCAGTCAATTGGAAGAGAACTTCAGCAGGCAGGAATGGACTTTCTGAGAGTTCGCTTGCAAGGCAGGTGCCCAGATGAAGACCTCTGACATGCCCTTGATGCTTTCTAGCATTTTTGGTATACTCCCAGCAGCTGTGATTCCGAGGTACACCTTCAGCGCCTTATCTCCGAAGGCTACAACTACCACGATGCACTTGATGAGACAACTGCTCACTTTGCTCCTCCTCCCCCTCAGACTTAG

mRNA sequence

ATGGCTCTGACAGAAGCAGTTTCCCGCGATAGCAAGATCTCCAAACTGGAGCCGCGCCTCTCGGAAGCTGAGAATGAGCTTCTCAAAGCCAAGGAGGGGCGGGTCATGGCTGAATCCGACCTGTCAAGGTATAGGGAGGCTGAAAACATCTCTTTGGATTCTCTAGGGTGGGAGTCCGTTTGGGCTGCCAACTTTGAGGAAGGATTGCAGTCGGCCAAGACGATCTTGGACAAGCCAGAGCTCTTGAAGTCCCACTTCGCGGCTCTGCCTGCTTCAGTCAATTGGAAGAGAACTTCAGCAGGCAGGAATGGACTTTCTGAGAGTTCGCTTGCAAGGCAGCATTTTTGGTATACTCCCAGCAGCTGTGATTCCGAGGTACACCTTCAGCGCCTTATCTCCGAAGGCTACAACTACCACGATGCACTTGATGAGACAACTGCTCACTTTGCTCCTCCTCCCCCTCAGACTTAG

Coding sequence (CDS)

ATGGCTCTGACAGAAGCAGTTTCCCGCGATAGCAAGATCTCCAAACTGGAGCCGCGCCTCTCGGAAGCTGAGAATGAGCTTCTCAAAGCCAAGGAGGGGCGGGTCATGGCTGAATCCGACCTGTCAAGGTATAGGGAGGCTGAAAACATCTCTTTGGATTCTCTAGGGTGGGAGTCCGTTTGGGCTGCCAACTTTGAGGAAGGATTGCAGTCGGCCAAGACGATCTTGGACAAGCCAGAGCTCTTGAAGTCCCACTTCGCGGCTCTGCCTGCTTCAGTCAATTGGAAGAGAACTTCAGCAGGCAGGAATGGACTTTCTGAGAGTTCGCTTGCAAGGCAGCATTTTTGGTATACTCCCAGCAGCTGTGATTCCGAGGTACACCTTCAGCGCCTTATCTCCGAAGGCTACAACTACCACGATGCACTTGATGAGACAACTGCTCACTTTGCTCCTCCTCCCCCTCAGACTTAG

Protein sequence

MALTEAVSRDSKISKLEPRLSEAENELLKAKEGRVMAESDLSRYREAENISLDSLGWESVWAANFEEGLQSAKTILDKPELLKSHFAALPASVNWKRTSAGRNGLSESSLARQHFWYTPSSCDSEVHLQRLISEGYNYHDALDETTAHFAPPPPQT

Homology

[Close]

BLAST of MC10g_new0255 vs. NCBI nr
Match: XP_022149800.1 (uncharacterized protein LOC111018146 [Momordica charantia])

HSP 1 Score: 58.2 bits (139), Expect = 5.03e-07
Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 1   MALTEAVSRDSKISKLEPRLSEAENELLKAKEGRVMAESDLSRYREAENISLDSLGWESV 60
           MA  EA   D++I++LE RL +AE+ L KA+EG  +AESDL + +EAE  +LDSLG ES 
Sbjct: 65  MAKAEAFVCDARIAELESRLLDAEDRLFKAEEGDPLAESDLVKSKEAEGTTLDSLGRESA 124

Query: 61  WAANFEEGLQSAKT 74
            A + +  L+  ++
Sbjct: 125 SATSLKIALEKLRS 138

[Close]

BLAST of MC10g_new0255 vs. ExPASy TrEMBL
Match: A0A6J1D6R6 (uncharacterized protein LOC111018146 OS=Momordica charantia OX=3673 GN=LOC111018146 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.43e-07
Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 1   MALTEAVSRDSKISKLEPRLSEAENELLKAKEGRVMAESDLSRYREAENISLDSLGWESV 60
           MA  EA   D++I++LE RL +AE+ L KA+EG  +AESDL + +EAE  +LDSLG ES 
Sbjct: 65  MAKAEAFVCDARIAELESRLLDAEDRLFKAEEGDPLAESDLVKSKEAEGTTLDSLGRESA 124

Query: 61  WAANFEEGLQSAKT 74
            A + +  L+  ++
Sbjct: 125 SATSLKIALEKLRS 138

The following BLAST results are available for this feature:

BLAST of MC10g_new0255 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g_new0255 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149800.1	5.03e-07	45.95	uncharacterized protein LOC111018146 [Momordica charantia]	[more]

BLAST of MC10g_new0255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6R6	2.43e-07	45.95	uncharacterized protein LOC111018146 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of MC10g_new0255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g_new0255.1	MC10g_new0255.1	mRNA