MC10g_new0140 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGATGATATTATCTTGACTGGGCCTTCTCCACAAGAACTTGACTCTGTTAAGGTCATTCTACGATCTTCTTTTCAACTTAAAGATTTGGGGTCTGTTAAGTATTTTTTGGGGTTTGGAGATTTCTCGTTCCCAACATGGTATTTCTCTTTCTCAATGAAAGTATTGCCTTCAAATACTTGAAGATACCGGCTTTCTCGGGGCTCGTCCTGCTTCTTTTCCCATGGACCCGAATCTTAAGCTTGCTAAGTCTGCTGGCACTCTTCTTTCTGACACATAGGCTACTTCTTATCGTCGTTTACTTGGTCGTTTGCTTTATTTACAGATTTCTTGGCCTGATATATCTTTTTGTGTCCACAAACTTAGTCGCAACATCCATGTTCTGGTCATTTGGCAGCACTTTATCACTTGTTACGTTATCTGAAAGGCTTTCCAGGTCAAGAGATCTTGCTGCAAAAGTCCTCTGTTTTCAATCTCTGTGCTTTTGTTGATGCAAATTAGGGTTCTTGTTTGGATACTCGTCGATCGGTCATCGATTTTTGTGTTTTTCTTGGAGACTCTTTGGTTTTCTTGGCGGTCTAAGAAACAGGCTACTGTTTCTCGTTCTTCTGCTGAAGCAGAATATCGTGCCCTTGCTGCTGTCACTAGCGAGTTGGTGTGGATTCGTCAGTTACTTTATGATTTGTTTATCCCTTTTTCTCCTCCAGTTGTGGTTTATTGTGATAATCAAGTTGCTGTAGCCATTGCATCAAATCCCACATTTCATGAGCGCACGAAGCACATTGCCACTTTGTACGAGACAAGATCGCTAATGGTTTCTTGAAGTTATTACCTATCCGATCTAGTTCACAATTGGCCGATATGTTTACTAAAGCCTTGGGATCCTCTGCTTTACGTTCTTTGCTATCCAGGATGAGTGTTTATGATCTTTACATTCCATCTTGAGGGGGAGTATTAGTGTTAGTCATAGTTTAATTAATACTATGGTAGTTAGATAGTTTGTTATGATATAAGCTTACAGATTGAATTGTATTTATACTGACCAAAT ATGCAAATTAGGGTTCTTGTTTGGATACTCGTCGATCGGTCATCGATTTTTGTGTTTTTCTTGGAGACTCTTTGGTTTTCTTGGCGGTCTAAGAAACAGGCTACTGTTTCTCGTTCTTCTGCTGAAGCAGAATATCGTGCCCTTGCTGCTGTCACTAGCGAGTTGGTGTGGATTCGTCAGTTACTTTATGATTTGTTTATCCCTTTTTCTCCTCCAGTTGTGGTTTATTGTGATAATCAAGTTGCTGTAGCCATTGCATCAAATCCCACATTTCATGAGCGCACGAAGCACATTGCCACTTTGTACGAGACAAGATCGCTAATGGTTTCTTGA ATGCAAATTAGGGTTCTTGTTTGGATACTCGTCGATCGGTCATCGATTTTTGTGTTTTTCTTGGAGACTCTTTGGTTTTCTTGGCGGTCTAAGAAACAGGCTACTGTTTCTCGTTCTTCTGCTGAAGCAGAATATCGTGCCCTTGCTGCTGTCACTAGCGAGTTGGTGTGGATTCGTCAGTTACTTTATGATTTGTTTATCCCTTTTTCTCCTCCAGTTGTGGTTTATTGTGATAATCAAGTTGCTGTAGCCATTGCATCAAATCCCACATTTCATGAGCGCACGAAGCACATTGCCACTTTGTACGAGACAAGATCGCTAATGGTTTCTTGA MQIRVLVWILVDRSSIFVFFLETLWFSWRSKKQATVSRSSAEAEYRALAAVTSELVWIRQLLYDLFIPFSPPVVVYCDNQVAVAIASNPTFHERTKHIATLYETRSLMVS Homology
BLAST of MC10g_new0140 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-14 Identity = 44/86 (51.16%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of MC10g_new0140 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 6.5e-14 Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of MC10g_new0140 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of MC10g_new0140 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.7e-09 Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of MC10g_new0140 vs. NCBI nr
Match: KAA0065481.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08722.1 putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 5.87e-28 Identity = 56/88 (63.64%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of MC10g_new0140 vs. NCBI nr
Match: XP_022141777.1 (uncharacterized protein LOC111012058 [Momordica charantia]) HSP 1 Score: 112 bits (280), Expect = 2.05e-27 Identity = 59/85 (69.41%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of MC10g_new0140 vs. NCBI nr
Match: XP_024024810.1 (uncharacterized protein LOC112092560 [Morus notabilis]) HSP 1 Score: 111 bits (277), Expect = 1.01e-26 Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 0
BLAST of MC10g_new0140 vs. NCBI nr
Match: XP_038896371.1 (uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]) HSP 1 Score: 111 bits (278), Expect = 1.60e-26 Identity = 56/86 (65.12%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of MC10g_new0140 vs. NCBI nr
Match: XP_016196099.1 (uncharacterized protein LOC107637174 [Arachis ipaensis]) HSP 1 Score: 109 bits (272), Expect = 1.71e-26 Identity = 55/82 (67.07%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of MC10g_new0140 vs. ExPASy TrEMBL
Match: A0A5D3CBP3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00270 PE=4 SV=1) HSP 1 Score: 112 bits (280), Expect = 2.84e-28 Identity = 56/88 (63.64%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of MC10g_new0140 vs. ExPASy TrEMBL
Match: A0A6J1CKT9 (uncharacterized protein LOC111012058 OS=Momordica charantia OX=3673 GN=LOC111012058 PE=4 SV=1) HSP 1 Score: 112 bits (280), Expect = 9.91e-28 Identity = 59/85 (69.41%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of MC10g_new0140 vs. ExPASy TrEMBL
Match: A0A5D3BYJ4 (Reverse transcriptase, RNA-dependent DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00740 PE=4 SV=1) HSP 1 Score: 108 bits (271), Expect = 1.31e-26 Identity = 62/106 (58.49%), Postives = 73/106 (68.87%), Query Frame = 0
BLAST of MC10g_new0140 vs. ExPASy TrEMBL
Match: A0A2K3JYT3 (Copia protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g059548 PE=4 SV=1) HSP 1 Score: 104 bits (260), Expect = 3.66e-26 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of MC10g_new0140 vs. ExPASy TrEMBL
Match: A0A7C8YUP8 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 104 bits (260), Expect = 6.03e-26 Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of MC10g_new0140 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of MC10g_new0140 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 43.9 bits (102), Expect = 9.7e-05 Identity = 23/41 (56.10%), Postives = 26/41 (63.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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