MC10g_new0026 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g_new0026
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	remorin-like
Location	MC10: 967601 .. 968842 (+)
RNA-Seq Expression	MC10g_new0026
Synteny	MC10g_new0026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTCAGGGAGAATCTGAATCCTCGTCAAAGCCTCCACCGCTGCCTGCGGCGGAGCCGGTTGAGGAGCCGTCCAAAGATGTGGCGGAGGAGAAATCAATCATCCCACGAACCCCACCGGAGGAGATGGAGAATCCGGCCGATCACTCCAAAGCTCTGGCTGTCGTTGAAAGTAATTTACATATATAAAAACTCTCAACTTTTTCTGATTACTTTTTGGGTTTTTACCTTAGATTTTTGGTTGGTGGGAAAAGAAAATAAAGGTTGAAAAAAAAGGGGAATGGAATCTTATTCTTGGAATTAATCTTCCTCTGTTTTTTTTTTTTCTCTCGTGTAATTAATCTGTTTGGTTGGCTAGAAAGAAGAGAGAATGCAAAATTTAGCTTTCCTGTGAATTTGTAAAAGGAAAGCCAGAATTTTTTATTTTTTATTTTTATTTTTTGGGTGTGTCCTAAATTTCATGTTTGGCTTTATCTTCTTTTGAAATTGATAGAGACTCCAGAAAAAGCAGAGCAGAAAGAGAAAGACAATGGAGGCTCAATTAATAGAGGTAATCAGATGGTGATATGGAATGATTAATGTCAATAATCTAATTACCAAATCAGTAATTGCATTAAATTTTTTGTTTTTTCCTTTCTTTTTTGGTTTTCAGATGCTGTGCTAGCCAGAGTGGCAACAGAGAAGAGATTGTCACTCATCAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAACAGGTAACCATCATCTTTAAATTTTGATTATGATTTTAAACACACTTATTAGTCACATATGTGATTAAGCAGAGTTACTCTTGTCATCCCTTTTTGGAAATTTCCTTTTCTGATATTTTTAGTTACATATAATTGATGGGATTTGTTGAGCAGAGCACACAAAAAGCTATCAGAAATTGGGTCATGGGAGAACAGCAAGAAAGCAGCTGTGGAGGCTGAGCTGAAACAGATTGAGGTAAGCAATCTGGAAAAATGGAAGCTTTTTGTGGAAGAATCTGTTTGGATGACAGGAACATTTTGGTGGCAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATAGAGAAAATGAAGAACAAAATAGCTGAGATCCACAAATCAGCAGAGGAAAAGAAGGCCATTATTGAAGCCATACGTGGAGAAGACATGCTCAAGGCAGAGGAAACTGCAGCAAAATGGAGAGCCACTGGAACTGCTCCAAACAAGCTCCTTGGTTGTTTCTGA

mRNA sequence

ATGGCCGCTCAGGGAGAATCTGAATCCTCGTCAAAGCCTCCACCGCTGCCTGCGGCGGAGCCGGTTGAGGAGCCGTCCAAAGATGTGGCGGAGGAGAAATCAATCATCCCACGAACCCCACCGGAGGAGATGGAGAATCCGGCCGATCACTCCAAAGCTCTGGCTGTCGTTGAAAAGACTCCAGAAAAAGCAGAGCAGAAAGAGAAAGACAATGGAGGCTCAATTAATAGAGATGCTGTGCTAGCCAGAGTGGCAACAGAGAAGAGATTGTCACTCATCAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAACAGAGCACACAAAAAGCTATCAGAAATTGGGTCATGGGAGAACAGCAAGAAAGCAGCTGTGGAGGCTGAGCTGAAACAGATTGAGGTAAGCAATCTGGAAAAATGGAAGCTTTTTGTGGAAGAATCTGTTTGGATGACAGGAACATTTTGGTGGCAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATAGAGAAAATGAAGAACAAAATAGCTGAGATCCACAAATCAGCAGAGGAAAAGAAGGCCATTATTGAAGCCATACGTGGAGAAGACATGCTCAAGGCAGAGGAAACTGCAGCAAAATGGAGAGCCACTGGAACTGCTCCAAACAAGCTCCTTGGTTGTTTCTGA

Coding sequence (CDS)

ATGGCCGCTCAGGGAGAATCTGAATCCTCGTCAAAGCCTCCACCGCTGCCTGCGGCGGAGCCGGTTGAGGAGCCGTCCAAAGATGTGGCGGAGGAGAAATCAATCATCCCACGAACCCCACCGGAGGAGATGGAGAATCCGGCCGATCACTCCAAAGCTCTGGCTGTCGTTGAAAAGACTCCAGAAAAAGCAGAGCAGAAAGAGAAAGACAATGGAGGCTCAATTAATAGAGATGCTGTGCTAGCCAGAGTGGCAACAGAGAAGAGATTGTCACTCATCAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAACAGAGCACACAAAAAGCTATCAGAAATTGGGTCATGGGAGAACAGCAAGAAAGCAGCTGTGGAGGCTGAGCTGAAACAGATTGAGGTAAGCAATCTGGAAAAATGGAAGCTTTTTGTGGAAGAATCTGTTTGGATGACAGGAACATTTTGGTGGCAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATAGAGAAAATGAAGAACAAAATAGCTGAGATCCACAAATCAGCAGAGGAAAAGAAGGCCATTATTGAAGCCATACGTGGAGAAGACATGCTCAAGGCAGAGGAAACTGCAGCAAAATGGAGAGCCACTGGAACTGCTCCAAACAAGCTCCTTGGTTGTTTCTGA

Protein sequence

MAAQGESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF

Homology

[Close]

BLAST of MC10g_new0026 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-51
Identity = 133/213 (62.44%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 14  PPLPAAEPVEEPSKDVAEEKSII-PRTPP--EEMENPADHSKALAVVE-KTPEKAEQKEK 73
           P  PA  PVE P + VA+EK+I+ P  PP  EE E P D SKAL VVE K PE A++K++
Sbjct: 14  PAPPAPGPVEAPKEVVADEKAIVAPALPPPAEEKEKP-DDSKALVVVETKAPEPADEKKE 73

Query: 74  DNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVEAE 133
              GSI+RDAVLARVATEKR+SLIKAWEESEKSKAEN+A KK+S IG+WENSKKA +EAE
Sbjct: 74  ---GSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAE 133

Query: 134 LKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAI 193
           LK++E                        E+LEKKKAEY EKMKNKIA +HK AEEK+A+
Sbjct: 134 LKKME------------------------EQLEKKKAEYTEKMKNKIALLHKEAEEKRAM 193

Query: 194 IEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 223
           IEA RGED+LKAEE AAK+RATGTAP K+LG F
Sbjct: 194 IEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of MC10g_new0026 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.5e-46
Identity = 121/221 (54.75%), Postives = 154/221 (69.68%), Query Frame = 0


Query: 7   SESSSKPPPLPAAEPVEEP--SKDVAEEKSIIPRTPPEEMENPA----DHSKALAVVEKT 66
           +E+ S+P P P   PVE+P  + DVA ++   P  PP  + +PA        + A+V   
Sbjct: 10  TETVSEPTPTPEV-PVEKPAAAADVAPQEK--PVAPPPVLPSPAPAEEKQEDSKAIVPVV 69

Query: 67  PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN 126
           P++ E+++K+  GS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KKLS IGSWEN
Sbjct: 70  PKEVEEEKKE--GSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWEN 129

Query: 127 SKKAAVEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIH 186
           +KKAAVEAELK++E                        E+LEKKKAEY+E+MKNKIA+IH
Sbjct: 130 NKKAAVEAELKKME------------------------EQLEKKKAEYVEQMKNKIAQIH 189

Query: 187 KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGC 222
           K AEEK+A+IEA RGE++LKAEE AAK+RATGTAP KL GC
Sbjct: 190 KEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of MC10g_new0026 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-42
Identity = 113/210 (53.81%), Postives = 140/210 (66.67%), Query Frame = 0


Query: 13  PPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQKEKDNG 72
           P P PA  P  + +KDVAEEK  I   PPE++    D SKAL VVEK P +     K   
Sbjct: 34  PAPAPAPTPA-DVTKDVAEEK--IQNPPPEQI---FDDSKALTVVEK-PVEEPAPAKPAS 93

Query: 73  GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVEAELKQ 132
            S++RD  LA ++ EKRLS ++AWEESEKSKAEN+A KK++++ +WENSKKAAVEA+LK+
Sbjct: 94  ASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKK 153

Query: 133 IEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEA 192
           IE                        E+LEKKKAEY E+MKNK+A IHK AEE++A+IEA
Sbjct: 154 IE------------------------EQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEA 212

Query: 193 IRGEDMLKAEETAAKWRATGTAPNKLLGCF 223
            RGED+LKAEETAAK+RATG  P    GCF
Sbjct: 214 KRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of MC10g_new0026 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.8e-39
Identity = 109/206 (52.91%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 17  PAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQKEKDNGGSIN 76
           PA EP   P  +VA+EK  I   PP E       SKALAVVEK P +    +K + GS +
Sbjct: 20  PAKEPTPAP-VEVADEK--IHNPPPVE-------SKALAVVEK-PIEEHTPKKASSGSAD 79

Query: 77  RDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVEAELKQIEVS 136
           RD +LA +  EK+ S IKAWEESEKSKAENRA KK+S++ +WENSKKAAVEA+L++IE  
Sbjct: 80  RDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIE-- 139

Query: 137 NLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEAIRGE 196
                                 EKLEKKKA+Y EKMKNK+A IHK AEEK+A++EA +GE
Sbjct: 140 ----------------------EKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGE 190

Query: 197 DMLKAEETAAKWRATGTAPNKLLGCF 223
           ++LKAEE  AK+RATG  P    GCF
Sbjct: 200 ELLKAEEMGAKYRATGVVPKATCGCF 190

[Close]

BLAST of MC10g_new0026 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 0


Query: 72  GGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVEAELK 131
           GG    +  + +V  E+  S I AW+ +E +K  NR  ++   I  WE  +     A LK
Sbjct: 191 GGGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVEKANAWLK 250

Query: 132 QIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIE 191
           +                        ++ KLE+K+A+ +EK +N++A+  + AEEK+A  E
Sbjct: 251 K------------------------YERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAE 310

Query: 192 AIRGEDMLKAEETAAKWRATGTAPNK 218
           A RG  + +  E A   RA G AP+K
Sbjct: 311 AKRGTKVARVLELANFMRAVGRAPSK 312

[Close]

BLAST of MC10g_new0026 vs. NCBI nr
Match: XP_022141174.1 (remorin-like [Momordica charantia])

HSP 1 Score: 347 bits (889), Expect = 4.50e-119
Identity = 198/222 (89.19%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 1   MAAQGESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKT 60
           MAAQGESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKT
Sbjct: 1   MAAQGESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKT 60

Query: 61  PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN 120
           PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN
Sbjct: 61  PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN 120

Query: 121 SKKAAVEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIH 180
           SKKAAVEAELKQIE                        EKLEKKKAEYIEKMKNKIAEIH
Sbjct: 121 SKKAAVEAELKQIE------------------------EKLEKKKAEYIEKMKNKIAEIH 180

Query: 181 KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF
Sbjct: 181 KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 198

[Close]

BLAST of MC10g_new0026 vs. NCBI nr
Match: XP_038875881.1 (remorin-like isoform X2 [Benincasa hispida])

HSP 1 Score: 261 bits (667), Expect = 2.99e-85
Identity = 159/217 (73.27%), Postives = 172/217 (79.26%), Query Frame = 0


Query: 6   ESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAE 65
           ES+S S+ PPLPAA+ +EE +KDVAEEKSIIP TPPE    PAD SKALA +EKT EKAE
Sbjct: 10  ESQSPSERPPLPAADSMEERTKDVAEEKSIIPLTPPEV--KPADDSKALATIEKTHEKAE 69

Query: 66  QKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAA 125
           +KEKD+ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENS KAA
Sbjct: 70  EKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSNKAA 129

Query: 126 VEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEE 185
           VEAELKQIE                        EKLEKKKAEYIEKMKNKIA IHKSAEE
Sbjct: 130 VEAELKQIE------------------------EKLEKKKAEYIEKMKNKIALIHKSAEE 189

Query: 186 KKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           KKA IEA RGE+ +KAEE AAK+R+TGTAP K+LGCF
Sbjct: 190 KKADIEAKRGEEKIKAEEIAAKYRSTGTAPKKILGCF 200

[Close]

BLAST of MC10g_new0026 vs. NCBI nr
Match: XP_038875876.1 (remorin-like isoform X1 [Benincasa hispida])

HSP 1 Score: 253 bits (647), Expect = 3.88e-82
Identity = 158/222 (71.17%), Postives = 172/222 (77.48%), Query Frame = 0


Query: 6   ESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVE-----KT 65
           ES+S S+ PPLPAA+ +EE +KDVAEEKSIIP TPPE    PAD SKALA +E     +T
Sbjct: 10  ESQSPSERPPLPAADSMEERTKDVAEEKSIIPLTPPEV--KPADDSKALATIESFGMIET 69

Query: 66  PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN 125
            EKAE+KEKD+ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWEN
Sbjct: 70  HEKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 129

Query: 126 SKKAAVEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIH 185
           S KAAVEAELKQIE                        EKLEKKKAEYIEKMKNKIA IH
Sbjct: 130 SNKAAVEAELKQIE------------------------EKLEKKKAEYIEKMKNKIALIH 189

Query: 186 KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           KSAEEKKA IEA RGE+ +KAEE AAK+R+TGTAP K+LGCF
Sbjct: 190 KSAEEKKADIEAKRGEEKIKAEEIAAKYRSTGTAPKKILGCF 205

[Close]

BLAST of MC10g_new0026 vs. NCBI nr
Match: XP_008439225.1 (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 253 bits (646), Expect = 4.98e-82
Identity = 155/215 (72.09%), Postives = 168/215 (78.14%), Query Frame = 0


Query: 8   ESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQK 67
           ES S+PPP  AAEP ++   DVAEEKSIIP  PPE+ E PAD SKALA+VEK+ EKAE+K
Sbjct: 14  ESPSEPPPPAAAEPTKD---DVAEEKSIIPLPPPED-EKPADDSKALAIVEKSDEKAEEK 73

Query: 68  EKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVE 127
           EK++ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENSKKAAVE
Sbjct: 74  EKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVE 133

Query: 128 AELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKK 187
           AELKQIE                        EKLEKKK EYIEKMKNKIA IHK+AEEKK
Sbjct: 134 AELKQIE------------------------EKLEKKKGEYIEKMKNKIALIHKTAEEKK 193

Query: 188 AIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           A+IEA RGE+ LKAEE AAK RATGTAP K+ GCF
Sbjct: 194 AVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 200

[Close]

BLAST of MC10g_new0026 vs. NCBI nr
Match: KAA0033640.1 (remorin [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (640), Expect = 4.07e-81
Identity = 154/215 (71.63%), Postives = 167/215 (77.67%), Query Frame = 0


Query: 8   ESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQK 67
           ES  +PPP  AAEP ++   DVAEEKSIIP  PPE+ E PAD SKALA+VEK+ EKAE+K
Sbjct: 14  ESPLEPPPPAAAEPTKD---DVAEEKSIIPLPPPED-EKPADDSKALAIVEKSDEKAEEK 73

Query: 68  EKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVE 127
           EK++ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENSKKAAVE
Sbjct: 74  EKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVE 133

Query: 128 AELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKK 187
           AELKQIE                        EKLEKKK EYIEKMKNKIA IHK+AEEKK
Sbjct: 134 AELKQIE------------------------EKLEKKKGEYIEKMKNKIALIHKTAEEKK 193

Query: 188 AIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           A+IEA RGE+ LKAEE AAK RATGTAP K+ GCF
Sbjct: 194 AVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 200

[Close]

BLAST of MC10g_new0026 vs. ExPASy TrEMBL
Match: A0A6J1CHU8 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111011630 PE=3 SV=1)

HSP 1 Score: 347 bits (889), Expect = 2.18e-119
Identity = 198/222 (89.19%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 1   MAAQGESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKT 60
           MAAQGESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKT
Sbjct: 1   MAAQGESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKT 60

Query: 61  PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN 120
           PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN
Sbjct: 61  PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN 120

Query: 121 SKKAAVEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIH 180
           SKKAAVEAELKQIE                        EKLEKKKAEYIEKMKNKIAEIH
Sbjct: 121 SKKAAVEAELKQIE------------------------EKLEKKKAEYIEKMKNKIAEIH 180

Query: 181 KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF
Sbjct: 181 KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 198

[Close]

BLAST of MC10g_new0026 vs. ExPASy TrEMBL
Match: A0A1S3AXW2 (remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1)

HSP 1 Score: 253 bits (646), Expect = 2.41e-82
Identity = 155/215 (72.09%), Postives = 168/215 (78.14%), Query Frame = 0


Query: 8   ESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQK 67
           ES S+PPP  AAEP ++   DVAEEKSIIP  PPE+ E PAD SKALA+VEK+ EKAE+K
Sbjct: 14  ESPSEPPPPAAAEPTKD---DVAEEKSIIPLPPPED-EKPADDSKALAIVEKSDEKAEEK 73

Query: 68  EKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVE 127
           EK++ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENSKKAAVE
Sbjct: 74  EKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVE 133

Query: 128 AELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKK 187
           AELKQIE                        EKLEKKK EYIEKMKNKIA IHK+AEEKK
Sbjct: 134 AELKQIE------------------------EKLEKKKGEYIEKMKNKIALIHKTAEEKK 193

Query: 188 AIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           A+IEA RGE+ LKAEE AAK RATGTAP K+ GCF
Sbjct: 194 AVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 200

[Close]

BLAST of MC10g_new0026 vs. ExPASy TrEMBL
Match: A0A5A7SRU5 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 1.97e-81
Identity = 154/215 (71.63%), Postives = 167/215 (77.67%), Query Frame = 0


Query: 8   ESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQK 67
           ES  +PPP  AAEP ++   DVAEEKSIIP  PPE+ E PAD SKALA+VEK+ EKAE+K
Sbjct: 14  ESPLEPPPPAAAEPTKD---DVAEEKSIIPLPPPED-EKPADDSKALAIVEKSDEKAEEK 73

Query: 68  EKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVE 127
           EK++ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENSKKAAVE
Sbjct: 74  EKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVE 133

Query: 128 AELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKK 187
           AELKQIE                        EKLEKKK EYIEKMKNKIA IHK+AEEKK
Sbjct: 134 AELKQIE------------------------EKLEKKKGEYIEKMKNKIALIHKTAEEKK 193

Query: 188 AIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           A+IEA RGE+ LKAEE AAK RATGTAP K+ GCF
Sbjct: 194 AVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 200

[Close]

BLAST of MC10g_new0026 vs. ExPASy TrEMBL
Match: A0A0A0L9S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1)

HSP 1 Score: 248 bits (634), Expect = 1.66e-80
Identity = 155/218 (71.10%), Postives = 167/218 (76.61%), Query Frame = 0


Query: 6   ESESSSKPPPLPAAEPVEEPSKD-VAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKA 65
           ES S + PPP P A  V EP+KD VAEEKSIIP  PPE+ E PAD SKALA+VEK+ EKA
Sbjct: 13  ESPSEAPPPPPPPA--VAEPTKDDVAEEKSIIPLLPPED-EKPADDSKALAIVEKSDEKA 72

Query: 66  EQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKA 125
           E+KEK++ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENSKKA
Sbjct: 73  EEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKA 132

Query: 126 AVEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAE 185
           AVEAELKQIE                        EK EKKK E+IEKMKNKIA IHK AE
Sbjct: 133 AVEAELKQIE------------------------EKFEKKKGEHIEKMKNKIASIHKKAE 192

Query: 186 EKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           EKKA+IEA RGE+ LKAEE AAK RATGTAP K+ GCF
Sbjct: 193 EKKAVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 203

[Close]

BLAST of MC10g_new0026 vs. ExPASy TrEMBL
Match: A0A5N6QYA2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008315 PE=3 SV=1)

HSP 1 Score: 237 bits (604), Expect = 1.20e-75
Identity = 142/217 (65.44%), Postives = 165/217 (76.04%), Query Frame = 0


Query: 6   ESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAE 65
           E++S S+PP  PA E VE+PSKDV EEKS+IP  P E+     D SKALAVVEK PE A 
Sbjct: 36  EAQSQSEPPLAPAPEHVEQPSKDVTEEKSVIPPPPAEK----PDESKALAVVEKAPEHAV 95

Query: 66  QKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAA 125
             EK   GS+NRDAVLARVATEKR+SLI+AWEESEKSKAEN+AHKKL++IG+WEN KKA+
Sbjct: 96  --EKSTEGSVNRDAVLARVATEKRISLIRAWEESEKSKAENKAHKKLTDIGAWENCKKAS 155

Query: 126 VEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEE 185
           +EAELK+IE                        EKLEKKKAEY+EKMKNK+A IH+SAEE
Sbjct: 156 IEAELKKIE------------------------EKLEKKKAEYVEKMKNKVALIHRSAEE 215

Query: 186 KKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGCF 222
           K+A+IEA RGED+LKAEETAAK+RATGT P KLLGCF
Sbjct: 216 KRAVIEAKRGEDLLKAEETAAKYRATGTGPKKLLGCF 222

[Close]

BLAST of MC10g_new0026 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-47
Identity = 121/221 (54.75%), Postives = 154/221 (69.68%), Query Frame = 0


Query: 7   SESSSKPPPLPAAEPVEEP--SKDVAEEKSIIPRTPPEEMENPA----DHSKALAVVEKT 66
           +E+ S+P P P   PVE+P  + DVA ++   P  PP  + +PA        + A+V   
Sbjct: 10  TETVSEPTPTPEV-PVEKPAAAADVAPQEK--PVAPPPVLPSPAPAEEKQEDSKAIVPVV 69

Query: 67  PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN 126
           P++ E+++K+  GS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KKLS IGSWEN
Sbjct: 70  PKEVEEEKKE--GSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWEN 129

Query: 127 SKKAAVEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIH 186
           +KKAAVEAELK++E                        E+LEKKKAEY+E+MKNKIA+IH
Sbjct: 130 NKKAAVEAELKKME------------------------EQLEKKKAEYVEQMKNKIAQIH 189

Query: 187 KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGC 222
           K AEEK+A+IEA RGE++LKAEE AAK+RATGTAP KL GC
Sbjct: 190 KEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of MC10g_new0026 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47
Identity = 121/221 (54.75%), Postives = 152/221 (68.78%), Query Frame = 0


Query: 7   SESSSKPPPLPAAEPVEEP--SKDVAEEKSIIPRTPPEEMENPA----DHSKALAVVEKT 66
           +E+ S+P P P   PVE+P  + DVA ++   P  PP  + +PA        + A+V   
Sbjct: 10  TETVSEPTPTPEV-PVEKPAAAADVAPQEK--PVAPPPVLPSPAPAEEKQEDSKAIVPVV 69

Query: 67  PEKAEQKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWEN 126
           P+  E+K++   GS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KKLS IGSWEN
Sbjct: 70  PKVEEEKKE---GSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWEN 129

Query: 127 SKKAAVEAELKQIEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIH 186
           +KKAAVEAELK++E                        E+LEKKKAEY+E+MKNKIA+IH
Sbjct: 130 NKKAAVEAELKKME------------------------EQLEKKKAEYVEQMKNKIAQIH 189

Query: 187 KSAEEKKAIIEAIRGEDMLKAEETAAKWRATGTAPNKLLGC 222
           K AEEK+A+IEA RGE++LKAEE AAK+RATGTAP KL GC
Sbjct: 190 KEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 200

[Close]

BLAST of MC10g_new0026 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 174.5 bits (441), Expect = 9.6e-44
Identity = 113/210 (53.81%), Postives = 140/210 (66.67%), Query Frame = 0


Query: 13  PPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQKEKDNG 72
           P P PA  P  + +KDVAEEK  I   PPE++    D SKAL VVEK P +     K   
Sbjct: 34  PAPAPAPTPA-DVTKDVAEEK--IQNPPPEQI---FDDSKALTVVEK-PVEEPAPAKPAS 93

Query: 73  GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVEAELKQ 132
            S++RD  LA ++ EKRLS ++AWEESEKSKAEN+A KK++++ +WENSKKAAVEA+LK+
Sbjct: 94  ASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKK 153

Query: 133 IEVSNLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEA 192
           IE                        E+LEKKKAEY E+MKNK+A IHK AEE++A+IEA
Sbjct: 154 IE------------------------EQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEA 212

Query: 193 IRGEDMLKAEETAAKWRATGTAPNKLLGCF 223
            RGED+LKAEETAAK+RATG  P    GCF
Sbjct: 214 KRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of MC10g_new0026 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-42
Identity = 104/199 (52.26%), Postives = 130/199 (65.33%), Query Frame = 0


Query: 24  EPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQKEKDNGGSINRDAVLAR 83
           E  K V   +++     P   E  +D SKA+ +V    E  E K+    GS++RDAVL R
Sbjct: 4   EEQKKVIMPEAVASEPSPPSKEEKSDDSKAIVLVVAAKEPTEDKKV---GSVHRDAVLVR 63

Query: 84  VATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVEAELKQIEVSNLEKWKL 143
           +  +KR+SLIKAWEE+EKSK EN+A KK+S +G+WENSKKA+VEAELK+IE         
Sbjct: 64  LEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIE--------- 123

Query: 144 FVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEAIRGEDMLKAEE 203
                          E+L KKKA Y E+MKNKIA+IHK AEEK+A+ EA RGED+LKAEE
Sbjct: 124 ---------------EQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEE 175

Query: 204 TAAKWRATGTAPNKLLGCF 223
            AAK+RATGTAP KL G F
Sbjct: 184 MAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of MC10g_new0026 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-40
Identity = 109/206 (52.91%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 17  PAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAEQKEKDNGGSIN 76
           PA EP   P  +VA+EK  I   PP E       SKALAVVEK P +    +K + GS +
Sbjct: 20  PAKEPTPAP-VEVADEK--IHNPPPVE-------SKALAVVEK-PIEEHTPKKASSGSAD 79

Query: 77  RDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAAVEAELKQIEVS 136
           RD +LA +  EK+ S IKAWEESEKSKAENRA KK+S++ +WENSKKAAVEA+L++IE  
Sbjct: 80  RDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIE-- 139

Query: 137 NLEKWKLFVEESVWMTGTFWWQEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEAIRGE 196
                                 EKLEKKKA+Y EKMKNK+A IHK AEEK+A++EA +GE
Sbjct: 140 ----------------------EKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGE 190

Query: 197 DMLKAEETAAKWRATGTAPNKLLGCF 223
           ++LKAEE  AK+RATG  P    GCF
Sbjct: 200 ELLKAEEMGAKYRATGVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of MC10g_new0026 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	1.6e-51	62.44	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	1.5e-46	54.75	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	1.4e-42	53.81	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	1.8e-39	52.91	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	1.2e-06	30.14	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of MC10g_new0026 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141174.1	4.50e-119	89.19	remorin-like [Momordica charantia]	[more]
XP_038875881.1	2.99e-85	73.27	remorin-like isoform X2 [Benincasa hispida]	[more]
XP_038875876.1	3.88e-82	71.17	remorin-like isoform X1 [Benincasa hispida]	[more]
XP_008439225.1	4.98e-82	72.09	PREDICTED: remorin [Cucumis melo]	[more]
KAA0033640.1	4.07e-81	71.63	remorin [Cucumis melo var. makuwa]	[more]

BLAST of MC10g_new0026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHU8	2.18e-119	89.19	remorin-like OS=Momordica charantia OX=3673 GN=LOC111011630 PE=3 SV=1	[more]
A0A1S3AXW2	2.41e-82	72.09	remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1	[more]
A0A5A7SRU5	1.97e-81	71.63	Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 S...	[more]
A0A0A0L9S3	1.66e-80	71.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1	[more]
A0A5N6QYA2	1.20e-75	65.44	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008315 PE=3 SV=1	[more]

BLAST of MC10g_new0026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	1.1e-47	54.75	Remorin family protein	[more]
AT5G23750.2	7.1e-47	54.75	Remorin family protein	[more]
AT3G61260.1	9.6e-44	53.81	Remorin family protein	[more]
AT3G48940.1	2.4e-42	52.26	Remorin family protein	[more]
AT2G45820.1	1.3e-40	52.91	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..49
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 158..222
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 6..143
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 158..222
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 6..143
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 88..217 e-value: 1.3E-26 score: 92.5
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 27..84 e-value: 9.8E-21 score: 73.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g_new0026.1	MC10g_new0026.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress