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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TGGACAATGAAAATGAGGTTGGGATTAAGAGAGCTGTATGGAACATTGCGATTGAAAGAGGAGGAATCAGAGGTTAGAAAGAACTTAATTGAAAGGTTACCACCCAGCCAAGTTAAGAAGGCGATGACTGACATAGAGAATGGAGTGAAAATCACTCTATTCGATGTAAGCATGAACAAAAAAATGGAAAGAATCATGAGGAGAGTTGCCCCGGAAGAATATCATATCGAATGGGACACCGAAGACAAAGGGTATGTGCTCGGAGATCAGATTTTGATGTGTTGGGACTCAAACAATGAACAATTATGTTACAAGGTCCTTGACGTTTCTATTCTTAGAATTAATCCGCAAATGTACTCTGATACTTTAGCAAGTAGTTCTTCTTCCCTTAAGAAA mRNA sequence TGGACAATGAAAATGAGGTTGGGATTAAGAGAGCTGTATGGAACATTGCGATTGAAAGAGGAGGAATCAGAGGTTAGAAAGAACTTAATTGAAAGGTTACCACCCAGCCAAGTTAAGAAGGCGATGACTGACATAGAGAATGGAGTGAAAATCACTCTATTCGATGTAAGCATGAACAAAAAAATGGAAAGAATCATGAGGAGAGTTGCCCCGGAAGAATATCATATCGAATGGGACACCGAAGACAAAGGGTATGTGCTCGGAGATCAGATTTTGATGTGTTGGGACTCAAACAATGAACAATTATGTTACAAGGTCCTTGACGTTTCTATTCTTAGAATTAATCCGCAAATGTACTCTGATACTTTAGCAAGTAGTTCTTCTTCCCTTAAGAAA Coding sequence (CDS) TGGACAATGAAAATGAGGTTGGGATTAAGAGAGCTGTATGGAACATTGCGATTGAAAGAGGAGGAATCAGAGGTTAGAAAGAACTTAATTGAAAGGTTACCACCCAGCCAAGTTAAGAAGGCGATGACTGACATAGAGAATGGAGTGAAAATCACTCTATTCGATGTAAGCATGAACAAAAAAATGGAAAGAATCATGAGGAGAGTTGCCCCGGAAGAATATCATATCGAATGGGACACCGAAGACAAAGGGTATGTGCTCGGAGATCAGATTTTGATGTGTTGGGACTCAAACAATGAACAATTATGTTACAAGGTCCTTGACGTTTCTATTCTTAGAATTAATCCGCAAATGTACTCTGATACTTTAGCAAGTAGTTCTTCTTCCCTTAAGAAA Protein sequence WTMKMRLGLRELYGTLRLKEEESEVRKNLIERLPPSQVKKAMTDIENGVKITLFDVSMNKKMERIMRRVAPEEYHIEWDTEDKGYVLGDQILMCWDSNNEQLCYKVLDVSILRINPQMYSDTLASSSSSLKK
Homology
BLAST of MC10g1407 vs. NCBI nr
Match: KAG6575830.1 (hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 80.5 bits (197), Expect = 2.13e-16 Identity = 40/109 (36.70%), Postives = 67/109 (61.47%), Query Frame = 0
Query: 1 WTMKMRLGLRELYGTLRLKE--EESEVRKNLIERLPPSQVKKAMTDIENGVKITLFDVSM 60
WTM +L ++ G L+L+E E++++R NL P S+V+ + + V+I L+DV+M
Sbjct: 5 WTMIKKLEDADMNGLLQLREDDEDADIRANLFNWWPRSKVRDLKRVVGSEVRIILYDVNM 64
Query: 61 NKKMERIMRRVAPEEYHIEWDTEDKGYVLGDQILMCWDSNNEQLCYKVL 107
++ ++ MR + YHIEWD ++K Y GD +LM WD +L YK++
Sbjct: 65 DQAIQTTMRWLGMARYHIEWDIQNKPYSSGDDMLMFWDLRYNRLAYKII 113
BLAST of MC10g1407 vs. NCBI nr
Match: KAG6575832.1 (hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 78.2 bits (191), Expect = 1.69e-15 Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 0
Query: 1 WTMKMRLGLRELYGTLRLKEEE--SEVRKNLIERLPPSQVKKAMTDIENGVKITLFDVSM 60
WTM +L ++ G L+L+E++ +++ NL S+V+ I N KITLFD +
Sbjct: 5 WTMIKKLQEADMNGLLQLREDDVDTDINTNLFRWWSRSKVRDLKKQIGNEAKITLFDENT 64
Query: 61 NKKMERIMRRVAPEEYHIEWDTEDKGYVLGDQILMCWDSNNEQLCYKVLDV 109
N+ M +R + YHIEWD ++K Y G +LM WD +L YKVL +
Sbjct: 65 NEVMHTTIRWLGTPRYHIEWDVKNKPYASGQDMLMGWDLKYNRLAYKVLQI 115
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6575830.1 | 2.13e-16 | 36.70 | hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6575832.1 | 1.69e-15 | 36.94 | hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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