MC10g1228 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1228
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAmino acid adenylation domain-containing protein
LocationMC10: 15531162 .. 15531371 (+)
RNA-Seq ExpressionMC10g1228
SyntenyMC10g1228
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGTCCCAAAGCTTTAGCCTTAATCGCGGTGCAGAGGCAGACAGCAGCTTCAAGATCAGCCAGGCCCTGGATCAGCGTGCAACATGGGGTTTTCGGTGGTGTGCCGATCACCACGTGCACCAAACCGTCTAGCACGTCGGCGCAAACCCCCAACTTGAGGGTGTCGGTTGGGCACCGGGGCTGTGGTGCGTGGTGCTTCGGGGGG

mRNA sequence

ATGTTGAGTCCCAAAGCTTTAGCCTTAATCGCGGTGCAGAGGCAGACAGCAGCTTCAAGATCAGCCAGGCCCTGGATCAGCGTGCAACATGGGGTTTTCGGTGGTGTGCCGATCACCACGTGCACCAAACCGTCTAGCACGTCGGCGCAAACCCCCAACTTGAGGGTGTCGGTTGGGCACCGGGGCTGTGGTGCGTGGTGCTTCGGGGGG

Coding sequence (CDS)

ATGTTGAGTCCCAAAGCTTTAGCCTTAATCGCGGTGCAGAGGCAGACAGCAGCTTCAAGATCAGCCAGGCCCTGGATCAGCGTGCAACATGGGGTTTTCGGTGGTGTGCCGATCACCACGTGCACCAAACCGTCTAGCACGTCGGCGCAAACCCCCAACTTGAGGGTGTCGGTTGGGCACCGGGGCTGTGGTGCGTGGTGCTTCGGGGGG

Protein sequence

MLSPKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGHRGCGAWCFGG
Homology
BLAST of MC10g1228 vs. NCBI nr
Match: QCD81273.1 (hypothetical protein DEO72_LG2g1598 [Vigna unguiculata])

HSP 1 Score: 80.9 bits (198), Expect = 2.53e-18
Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0

Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVG 59
          PK LAL AVQRQTAASRSARPW+S QHGVFGG P  T  KP+ TSA TPNLRVS G
Sbjct: 2  PKMLALRAVQRQTAASRSARPWMSSQHGVFGGFPSCTPIKPN-TSAHTPNLRVSAG 56

BLAST of MC10g1228 vs. NCBI nr
Match: PON92988.1 (hypothetical protein TorRG33x02_112670 [Trema orientale])

HSP 1 Score: 83.2 bits (204), Expect = 2.54e-18
Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0

Query: 2  LSPKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          L P+ LAL+AVQRQ AASRSARPWI VQ GV GGVP+ T T P S SA TPN R S+GH
Sbjct: 4  LIPRILALMAVQRQIAASRSARPWIRVQQGVTGGVPMVTLTNPPSKSAHTPNFRASLGH 62

BLAST of MC10g1228 vs. NCBI nr
Match: KAG8486674.1 (hypothetical protein CXB51_019983 [Gossypium anomalum])

HSP 1 Score: 82.4 bits (202), Expect = 4.60e-18
Identity = 44/57 (77.19%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          PK LAL AVQRQTAASRSARPW   QHG  GG P  T TKPS TSAQTPNLRVS GH
Sbjct: 2  PKTLALSAVQRQTAASRSARPWRREQHGCTGGEPTVTLTKPS-TSAQTPNLRVSCGH 57

BLAST of MC10g1228 vs. NCBI nr
Match: TYG58385.1 (hypothetical protein ES288_D08G218000v1 [Gossypium darwinii])

HSP 1 Score: 81.6 bits (200), Expect = 4.83e-18
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          PK LALIAVQRQTAASRSARPW   QHG  GG PI T TKPS T A TPNLR S+GH
Sbjct: 2  PKTLALIAVQRQTAASRSARPWRREQHGCTGGEPIVTLTKPS-TFAHTPNLRASLGH 57

BLAST of MC10g1228 vs. NCBI nr
Match: GER28035.1 (amino acid adenylation domain-containing protein [Striga asiatica])

HSP 1 Score: 80.9 bits (198), Expect = 1.14e-17
Identity = 40/56 (71.43%), Postives = 42/56 (75.00%), Query Frame = 0

Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVG 59
          PK LALIAV +QTAASRSA PWI VQHGVFGGVPI     P S SA TPN  VS+G
Sbjct: 2  PKTLALIAVHKQTAASRSASPWIRVQHGVFGGVPIVMSINPPSKSAHTPNFSVSLG 57

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A4D6KX88 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1598 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.23e-18
Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0

Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVG 59
          PK LAL AVQRQTAASRSARPW+S QHGVFGG P  T  KP+ TSA TPNLRVS G
Sbjct: 2  PKMLALRAVQRQTAASRSARPWMSSQHGVFGGFPSCTPIKPN-TSAHTPNLRVSAG 56

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A2P5F5C4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_112670 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.23e-18
Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0

Query: 2  LSPKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          L P+ LAL+AVQRQ AASRSARPWI VQ GV GGVP+ T T P S SA TPN R S+GH
Sbjct: 4  LIPRILALMAVQRQIAASRSARPWIRVQQGVTGGVPMVTLTNPPSKSAHTPNFRASLGH 62

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A5D2BQE9 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D08G218000v1 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.34e-18
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          PK LALIAVQRQTAASRSARPW   QHG  GG PI T TKPS T A TPNLR S+GH
Sbjct: 2  PKTLALIAVQRQTAASRSARPWRREQHGCTGGEPIVTLTKPS-TFAHTPNLRASLGH 57

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A5A7P547 (Amino acid adenylation domain-containing protein OS=Striga asiatica OX=4170 GN=STAS_03795 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.51e-18
Identity = 40/56 (71.43%), Postives = 42/56 (75.00%), Query Frame = 0

Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVG 59
          PK LALIAV +QTAASRSA PWI VQHGVFGGVPI     P S SA TPN  VS+G
Sbjct: 2  PKTLALIAVHKQTAASRSASPWIRVQHGVFGGVPIVMSINPPSKSAHTPNFSVSLG 57

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A4D8ZVR6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_044980 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.85e-16
Identity = 42/70 (60.00%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 1   MLSPKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
           ML PK LALI VQR TAASRSA PWI VQHGV GGVP+ T  +  S  A  PN R S+GH
Sbjct: 43  MLRPKMLALITVQRHTAASRSASPWIRVQHGVTGGVPMVTLRRFPSRLAHMPNFRASLGH 102

Query: 61  RGC-GAWCFG 69
               G W  G
Sbjct: 103 DALPGCWLGG 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
QCD81273.12.53e-1876.79hypothetical protein DEO72_LG2g1598 [Vigna unguiculata][more]
PON92988.12.54e-1869.49hypothetical protein TorRG33x02_112670 [Trema orientale][more]
KAG8486674.14.60e-1877.19hypothetical protein CXB51_019983 [Gossypium anomalum][more]
TYG58385.14.83e-1875.44hypothetical protein ES288_D08G218000v1 [Gossypium darwinii][more]
GER28035.11.14e-1771.43amino acid adenylation domain-containing protein [Striga asiatica][more]
Match NameE-valueIdentityDescription
A0A4D6KX881.23e-1876.79Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1598 PE=4 SV=1[more]
A0A2P5F5C41.23e-1869.49Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_112670 PE=4 SV... [more]
A0A5D2BQE92.34e-1875.44Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D08G218000v1 PE=... [more]
A0A5A7P5475.51e-1871.43Amino acid adenylation domain-containing protein OS=Striga asiatica OX=4170 GN=S... [more]
A0A4D8ZVR61.85e-1660.00Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_044980 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1228.1MC10g1228.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane