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MC10g1087 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGAGGGATCATACTCAAGCTTCGGATCAATGTCCCCAGAAGCAAGGAGTACGCCCGCTTGAGCACCAAAAAAATCTAATTCAGCTCCACGTAAGATAGCCAAAGTACGGTTGAGCAATCGACATGATATATTTGCTCACATTTCGGGCGAAGGT AGGAGGGATCATACTCAAGCTTCGGATCAATGTCCCCAGAAGCAAGGAGTACGCCCGCTTGAGCCAAAAAAATCTAATTCAGCTCCACGTAAGATAGCCAAAGTACGGTTGAGCAATCGACATGATATATTTGCTCACATTTCGGGCGAAGGT AGGAGGGATCATACTCAAGCTTCGGATCAATGTCCCCAGAAGCAAGGAGTACGCCCGCTTGAGCCAAAAAAATCTAATTCAGCTCCACGTAAGATAGCCAAAGTACGGTTGAGCAATCGACATGATATATTTGCTCACATTTCGGGCGAAGGT RRDHTQASDQCPQKQGVRPLEPKKSNSAPRKIAKVRLSNRHDIFAHISGEG Homology
BLAST of MC10g1087 vs. ExPASy Swiss-Prot
Match: P60096 (Ribosomal protein S12, mitochondrial OS=Magnolia grandiflora OX=3406 GN=RPS12 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 4.2e-16 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy Swiss-Prot
Match: P60097 (Ribosomal protein S12, mitochondrial OS=Magnolia soulangeana OX=3407 GN=RPS12 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 4.2e-16 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy Swiss-Prot
Match: P27070 (Ribosomal protein S12, mitochondrial OS=Panax ginseng OX=4054 GN=RPS12 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 3.6e-15 Identity = 42/55 (76.36%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy Swiss-Prot
Match: Q95869 (Ribosomal protein S12, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPS12 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.8e-14 Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy Swiss-Prot
Match: P68535 (Ribosomal protein S12, mitochondrial OS=Petunia hybrida OX=4102 GN=RPS12 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.8e-14 Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of MC10g1087 vs. NCBI nr
Match: YP_009565395.1 (ribosomal protein S12 [Morus notabilis] >QBB08752.1 ribosomal protein S12 [Morus notabilis]) HSP 1 Score: 86.3 bits (212), Expect = 4.91e-20 Identity = 45/55 (81.82%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of MC10g1087 vs. NCBI nr
Match: XP_042751547.1 (ribosomal protein S12, mitochondrial-like [Lactuca sativa]) HSP 1 Score: 84.3 bits (207), Expect = 2.67e-19 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. NCBI nr
Match: YP_006280933.1 (ribosomal protein S12 [Spirodela polyrhiza] >AFI54942.1 ribosomal protein S12 [Spirodela polyrhiza]) HSP 1 Score: 84.3 bits (207), Expect = 2.82e-19 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. NCBI nr
Match: XP_042753278.1 (ribosomal protein S12, mitochondrial-like [Lactuca sativa]) HSP 1 Score: 84.0 bits (206), Expect = 3.07e-19 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. NCBI nr
Match: YP_009640769.1 (ribosomal protein S12 [Lactuca serriola] >YP_009642399.1 ribosomal protein S12 [Lactuca saligna] >YP_009652412.1 ribosomal protein S12 [Lactuca sativa] >XP_042755634.1 ribosomal protein S12, mitochondrial [Lactuca sativa] >XP_042757916.1 ribosomal protein S12, mitochondrial [Lactuca sativa] >QHI41695.1 ribosomal protein S12 [Paraprenanthes diversifolia] >QXI86716.1 ribosomal protein S12 [Lactuca sativa var. capitata] >QXI86930.1 ribosomal protein S12 [Lactuca virosa] >QCF38037.1 ribosomal protein S12 [Lactuca sativa] >QCF38074.1 ribosomal protein S12 [Lactuca saligna]) HSP 1 Score: 84.0 bits (206), Expect = 3.79e-19 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy TrEMBL
Match: A0A411GRT7 (Ribosomal protein S12 OS=Morus notabilis OX=981085 GN=rps12 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.38e-20 Identity = 45/55 (81.82%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy TrEMBL
Match: I1VWK1 (Ribosomal protein S12 OS=Spirodela polyrhiza OX=29656 GN=rps12 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.36e-19 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy TrEMBL
Match: A0A6B9SBX3 (Ribosomal protein S12 OS=Paraprenanthes diversifolia OX=1400673 GN=rps12 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.83e-19 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy TrEMBL
Match: A0A4D6PZ31 (Ribosomal protein S12 OS=Lactuca saligna OX=75948 GN=rps12 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.83e-19 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. ExPASy TrEMBL
Match: A0A4D6PU26 (Ribosomal protein S12 OS=Lactuca serriola OX=75943 GN=rps12 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.83e-19 Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of MC10g1087 vs. TAIR 10
Match: AT2G07675.1 (Ribosomal protein S12/S23 family protein ) HSP 1 Score: 75.1 bits (183), Expect = 1.8e-14 Identity = 40/55 (72.73%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of MC10g1087 vs. TAIR 10
Match: ATMG00980.1 (Ribosomal protein S12/S23 family protein ) HSP 1 Score: 75.1 bits (183), Expect = 1.8e-14 Identity = 40/55 (72.73%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of MC10g1087 vs. TAIR 10
Match: ATCG00065.1 (ribosomal protein S12A ) HSP 1 Score: 40.4 bits (93), Expect = 5.0e-04 Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of MC10g1087 vs. TAIR 10
Match: ATCG01230.1 (ribosomal protein S12B ) HSP 1 Score: 40.4 bits (93), Expect = 5.0e-04 Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of MC10g1087 vs. TAIR 10
Match: ATCG00905.1 (ribosomal protein S12C ) HSP 1 Score: 40.4 bits (93), Expect = 5.0e-04 Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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