MC10g1045 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1045
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAcyl carrier protein
LocationMC10: 10374416 .. 10374599 (-)
RNA-Seq ExpressionMC10g1045
SyntenyMC10g1045
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCCAGTCCAATTCCTTGTCTTAGCTCATCAGGAATGCCAACCACAGCCATGTTCAGATGGATTGCTCCGGCTATTTTCATCACATGATGATCACCTTACCAAGGAGGAGGTCATTGAGAGAGTCCTCGGTTATCAAGTGTCATCCCAAAGTGAATCCGTCGAAGGTGATTCGACCTTATCAC

mRNA sequence

GTTCCAGTCCAATTCCTTGTCTTAGCTCATCAGGAATGCCAACCACAGCCATGTTCAGATGGATTGCTCCGGCTATTTTCATCACATGATGATCACCTTACCAAGGAGGAGGTCATTGAGAGAGTCCTCGTTATCAAGTGTCATCCCAAAGTGAATCCGTCGAAGGTGATTCGACCTTATCAC

Coding sequence (CDS)

GTTCCAGTCCAATTCCTTGTCTTAGCTCATCAGGAATGCCAACCACAGCCATGTTCAGATGGATTGCTCCGGCTATTTTCATCACATGATGATCACCTTACCAAGGAGGAGGTCATTGAGAGAGTCCTCGTTATCAAGTGTCATCCCAAAGTGAATCCGTCGAAGGTGATTCGACCTTATCAC

Protein sequence

VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVLVIKCHPKVNPSKVIRPYH
Homology
[Close]
BLAST of MC10g1045 vs. ExPASy Swiss-Prot
Match: P53665 (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.8e-06
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 21 GLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRPYH 62
          G +R FSSHDDHL++E V++RVL V+K  PKV+PSKV    H
Sbjct: 29 GTIRSFSSHDDHLSREAVVDRVLDVVKSFPKVDPSKVTPEVH 70

[Close]
BLAST of MC10g1045 vs. NCBI nr
Match: XP_008438272.1 (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo] >KAA0049107.1 acyl carrier protein 1 [Cucumis melo var. makuwa] >TYK17456.1 acyl carrier protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 4.32e-24
Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRP 60
          VPVQF  LA +ECQP PCS G LRLFSSHDDH+TK+EVIERVL VIKCHPKV+PSKV   
Sbjct: 13 VPVQFYALARRECQPTPCSGGSLRLFSSHDDHMTKDEVIERVLSVIKCHPKVDPSKVSPD 72

[Close]
BLAST of MC10g1045 vs. NCBI nr
Match: XP_022146921.1 (acyl carrier protein 1, mitochondrial [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 4.32e-24
Identity = 49/62 (79.03%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRP 60
          VPV+ L LAH+ECQPQP S  LLRLFSSHDDHLTKEEVIERVL VIKCHPKV+PSKV   
Sbjct: 13 VPVRLLALAHRECQPQPFSGVLLRLFSSHDDHLTKEEVIERVLAVIKCHPKVDPSKVSPD 72

[Close]
BLAST of MC10g1045 vs. NCBI nr
Match: XP_011650836.1 (acyl carrier protein 1, mitochondrial [Cucumis sativus] >KGN56676.1 hypothetical protein Csa_009680 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 7.09e-23
Identity = 47/62 (75.81%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRP 60
          VPVQF  LA +ECQP  CS G LRLFSSHDDHLTK+EVIERVL VIKCHPKV+PSKV   
Sbjct: 13 VPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKCHPKVDPSKVSPD 72

[Close]
BLAST of MC10g1045 vs. NCBI nr
Match: KAG7028717.1 (Acyl carrier protein 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 90.5 bits (223), Expect = 1.65e-21
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKV 56
          VPV+   LAH+ECQP  CS   LRLFSSHDDHLTKEEVIERVL V+KCHPKV+PSKV
Sbjct: 13 VPVRVFALAHRECQPVSCSVASLRLFSSHDDHLTKEEVIERVLSVVKCHPKVDPSKV 69

[Close]
BLAST of MC10g1045 vs. NCBI nr
Match: XP_023540926.1 (acyl carrier protein 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.5 bits (223), Expect = 1.65e-21
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKV 56
          VPV+F  LA +ECQP  CS   LRLFSSHDDHLTKEEVIERVL V+KCHPKV+PSKV
Sbjct: 13 VPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKCHPKVDPSKV 69

[Close]
BLAST of MC10g1045 vs. ExPASy TrEMBL
Match: A0A5D3D398 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003200 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.09e-24
Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRP 60
          VPVQF  LA +ECQP PCS G LRLFSSHDDH+TK+EVIERVL VIKCHPKV+PSKV   
Sbjct: 13 VPVQFYALARRECQPTPCSGGSLRLFSSHDDHMTKDEVIERVLSVIKCHPKVDPSKVSPD 72

[Close]
BLAST of MC10g1045 vs. ExPASy TrEMBL
Match: A0A6J1D0T9 (Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111016005 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.09e-24
Identity = 49/62 (79.03%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRP 60
          VPV+ L LAH+ECQPQP S  LLRLFSSHDDHLTKEEVIERVL VIKCHPKV+PSKV   
Sbjct: 13 VPVRLLALAHRECQPQPFSGVLLRLFSSHDDHLTKEEVIERVLAVIKCHPKVDPSKVSPD 72

[Close]
BLAST of MC10g1045 vs. ExPASy TrEMBL
Match: A0A1S3AW34 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103483433 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.09e-24
Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRP 60
          VPVQF  LA +ECQP PCS G LRLFSSHDDH+TK+EVIERVL VIKCHPKV+PSKV   
Sbjct: 13 VPVQFYALARRECQPTPCSGGSLRLFSSHDDHMTKDEVIERVLSVIKCHPKVDPSKVSPD 72

[Close]
BLAST of MC10g1045 vs. ExPASy TrEMBL
Match: A0A0A0L986 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_3G128860 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.43e-23
Identity = 47/62 (75.81%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRP 60
          VPVQF  LA +ECQP  CS G LRLFSSHDDHLTK+EVIERVL VIKCHPKV+PSKV   
Sbjct: 13 VPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKCHPKVDPSKVSPD 72

[Close]
BLAST of MC10g1045 vs. ExPASy TrEMBL
Match: A0A6J1IHA9 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111473491 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.28e-21
Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  VPVQFLVLAHQECQPQPCSDGLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKV 56
          VPV+F  LA +ECQP  CS   LRLFSSHDDHL+KEEVIERVL V+KCHPKV+PSKV
Sbjct: 13 VPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKCHPKVDPSKV 69

[Close]
BLAST of MC10g1045 vs. TAIR 10
Match: AT2G44620.1 (mitochondrial acyl carrier protein 1 )

HSP 1 Score: 52.0 bits (123), Expect = 2.0e-07
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 21 GLLRLFSSHDDHLTKEEVIERVL-VIKCHPKVNPSKVIRPYH 62
          G +R FSSHDDHL++E V++RVL V+K  PKV+PSKV    H
Sbjct: 29 GTIRSFSSHDDHLSREAVVDRVLDVVKSFPKVDPSKVTPEVH 70

The following BLAST results are available for this feature:
BLAST of MC10g1045 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P536652.8e-0659.52Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 ... [more]
BLAST of MC10g1045 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008438272.14.32e-2475.81PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo] >KAA0049107... [more]
XP_022146921.14.32e-2479.03acyl carrier protein 1, mitochondrial [Momordica charantia][more]
XP_011650836.17.09e-2375.81acyl carrier protein 1, mitochondrial [Cucumis sativus] >KGN56676.1 hypothetical... [more]
KAG7028717.11.65e-2177.19Acyl carrier protein 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_023540926.11.65e-2177.19acyl carrier protein 1, mitochondrial [Cucurbita pepo subsp. pepo][more]
BLAST of MC10g1045 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D3982.09e-2475.81Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434... [more]
A0A6J1D0T92.09e-2479.03Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111016005 PE=3 SV=1[more]
A0A1S3AW342.09e-2475.81Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103483433 PE=3 SV=1[more]
A0A0A0L9863.43e-2375.81Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_3G128860 PE=3 SV=1[more]
A0A6J1IHA92.28e-2175.44Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111473491 PE=3 SV=1[more]
BLAST of MC10g1045 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G44620.12.0e-0759.52mitochondrial acyl carrier protein 1 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1045.1MC10g1045.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0005739 mitochondrion
molecular_function GO:0000035 acyl binding
molecular_function GO:0000036 acyl carrier activity