MC10g1032 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1032
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptioncilia- and flagella-associated protein 251-like
LocationMC10: 10025071 .. 10025304 (-)
RNA-Seq ExpressionMC10g1032
SyntenyMC10g1032
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGTTCAATTATAGAAGTAATCAACGAAAGACTTCCACCAAAGAGAAACATTGAAAAACAATCCGAAGAATCTCTTTTTCAAAAGAACAAACCTCCAACAGTAAGTCTCAATCTTCTTGATAATCATGTAAACATTGATAGGGTTGTTGAAAATGCAACCATGTATGACAATCAAAACGAGAAGGATGATGAGAATGAGAAAGAGGATAAAGATGAGAAAGAAAATGAG

mRNA sequence

ATGTTGGGTTCAATTATAGAAGTAATCAACGAAAGACTTCCACCAAAGAGAAACATTGAAAAACAATCCGAAGAATCTCTTTTTCAAAAGAACAAACCTCCAACAGTAAGTCTCAATCTTCTTGATAATCATGTAAACATTGATAGGGTTGTTGAAAATGCAACCATGTATGACAATCAAAACGAGAAGGATGATGAGAATGAGAAAGAGGATAAAGATGAGAAAGAAAATGAG

Coding sequence (CDS)

ATGTTGGGTTCAATTATAGAAGTAATCAACGAAAGACTTCCACCAAAGAGAAACATTGAAAAACAATCCGAAGAATCTCTTTTTCAAAAGAACAAACCTCCAACAGTAAGTCTCAATCTTCTTGATAATCATGTAAACATTGATAGGGTTGTTGAAAATGCAACCATGTATGACAATCAAAACGAGAAGGATGATGAGAATGAGAAAGAGGATAAAGATGAGAAAGAAAATGAG

Protein sequence

MLGSIIEVINERLPPKRNIEKQSEESLFQKNKPPTVSLNLLDNHVNIDRVVENATMYDNQNEKDDENEKEDKDEKENE
Homology
BLAST of MC10g1032 vs. NCBI nr
Match: XP_022156699.1 (cilia- and flagella-associated protein 251-like [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 7.11e-12
Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 0

Query: 1   MLGSIIEVINERLPPKRNIEKQSEESLFQKNKPPTVSLNLLDNHVNIDRVVENATMYDNQ 60
           ML SI+EVIN+R PPK NIEKQS+ESL QKN PP+ SL LLD  V+ID++V+ A  ++ +
Sbjct: 57  MLTSILEVINDRFPPKSNIEKQSQESL-QKNVPPSRSLKLLDKEVDIDKIVKYAINHEKE 116

Query: 61  ---------------NEKDDENEKEDKDEKE 76
                          NE+DDENE+++  E+E
Sbjct: 117 DADQDGKGKEKEKEKNEQDDENEEKESSEEE 146

BLAST of MC10g1032 vs. NCBI nr
Match: KAE8650946.1 (hypothetical protein Csa_001290 [Cucumis sativus])

HSP 1 Score: 50.4 bits (119), Expect = 6.30e-05
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 0

Query: 1   MLGSIIEVINERLPPKRNIEKQSEESLFQKNKPPTVSLNLLDNHV--NIDRVVENAT 55
           +L S+ EV+N+RLP K   EKQSEESL +KN PP++SL ++D  +  NID+ V  AT
Sbjct: 180 LLLSLTEVVNQRLPHKCESEKQSEESL-EKNHPPSMSLEMIDADIDSNIDQAVAYAT 235

BLAST of MC10g1032 vs. NCBI nr
Match: KAE8651836.1 (hypothetical protein Csa_006724 [Cucumis sativus])

HSP 1 Score: 48.5 bits (114), Expect = 3.08e-04
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 1   MLGSIIEVINERLPPKRNIEKQSEESLFQKNKPPTVSLNLLDNHV--NIDRVVENAT 55
           +L S+ EV+N++LP K   EKQSEESL +KN PP+ SL ++D  +  NID+ V  AT
Sbjct: 180 LLLSLTEVVNKKLPHKCESEKQSEESL-EKNHPPSTSLEMIDADIDTNIDQAVAYAT 235

BLAST of MC10g1032 vs. NCBI nr
Match: KAE8653073.1 (hypothetical protein Csa_019650, partial [Cucumis sativus])

HSP 1 Score: 46.2 bits (108), Expect = 7.35e-04
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 1   MLGSIIEVINERLPPKRNIEKQSEESLFQKNKPPTVSLNLLDNHVNIDRVVENATMY 57
           +L S+ +V+N+ LP K   EKQSEESL +KN PP++SL ++D  V+ID  ++ A  Y
Sbjct: 70  LLLSLTKVVNQILPHKCESEKQSEESL-KKNHPPSMSLEMID--VDIDTNIDQAVAY 123

BLAST of MC10g1032 vs. ExPASy TrEMBL
Match: A0A6J1DUB5 (cilia- and flagella-associated protein 251-like OS=Momordica charantia OX=3673 GN=LOC111023544 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.44e-12
Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 0

Query: 1   MLGSIIEVINERLPPKRNIEKQSEESLFQKNKPPTVSLNLLDNHVNIDRVVENATMYDNQ 60
           ML SI+EVIN+R PPK NIEKQS+ESL QKN PP+ SL LLD  V+ID++V+ A  ++ +
Sbjct: 57  MLTSILEVINDRFPPKSNIEKQSQESL-QKNVPPSRSLKLLDKEVDIDKIVKYAINHEKE 116

Query: 61  ---------------NEKDDENEKEDKDEKE 76
                          NE+DDENE+++  E+E
Sbjct: 117 DADQDGKGKEKEKEKNEQDDENEEKESSEEE 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022156699.17.11e-1249.45cilia- and flagella-associated protein 251-like [Momordica charantia][more]
KAE8650946.16.30e-0552.63hypothetical protein Csa_001290 [Cucumis sativus][more]
KAE8651836.13.08e-0450.88hypothetical protein Csa_006724 [Cucumis sativus][more]
KAE8653073.17.35e-0447.37hypothetical protein Csa_019650, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1DUB53.44e-1249.45cilia- and flagella-associated protein 251-like OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1032.1MC10g1032.1mRNA