MC10g1031 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1031
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 9989828 .. 9989995 (-)
RNA-Seq ExpressionMC10g1031
SyntenyMC10g1031
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGGTGATATTTTCCCTATCTGGCCGGGTCGCAAATAAAGTTTTTGAGGATGCAGTGCCACGTATCCTCCGATGGAGGTGTGGCCATTCGACTGCATGGCATGTGCTCGATCGGGAGATTTTTCGGTCTACAACGGTAAGTTTGAGTTGGTTGTTTGTTGCATTGCAA

mRNA sequence

GAGGTGATATTTTCCCTATCTGGCCGGGTCGCAAATAAAGTTTTTGAGGATGCAGTGCCACGTATCCTCCGATGGAGGTGTGGCCATTCGACTGCATGGCATGTGCTCGATCGGGAGATTTTTCGGTCTACAACGGTAAGTTTGAGTTGGTTGTTTGTTGCATTGCAA

Coding sequence (CDS)

GAGGTGATATTTTCCCTATCTGGCCGGGTCGCAAATAAAGTTTTTGAGGATGCAGTGCCACGTATCCTCCGATGGAGGTGTGGCCATTCGACTGCATGGCATGTGCTCGATCGGGAGATTTTTCGGTCTACAACGGTAAGTTTGAGTTGGTTGTTTGTTGCATTGCAA

Protein sequence

EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRSTTVSLSWLFVALQ
Homology
BLAST of MC10g1031 vs. NCBI nr
Match: XP_022158744.1 (uncharacterized protein LOC111025209 [Momordica charantia])

HSP 1 Score: 65.1 bits (157), Expect = 1.04e-10
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 1   EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRSTTVS 47
           E+I SLSG +   V +D VPRIL+WR  HSTA+H+L REIFRS+TVS
Sbjct: 208 EIISSLSGHIVTIVSQDVVPRILQWRYEHSTAYHMLAREIFRSSTVS 254

BLAST of MC10g1031 vs. NCBI nr
Match: XP_022154561.1 (uncharacterized protein LOC111021802 [Momordica charantia])

HSP 1 Score: 65.1 bits (157), Expect = 1.81e-10
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 1   EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRST 44
           + I SLS RVANKV  D VP I +WR  HSTAWHVLDR+IF ST
Sbjct: 192 DTISSLSMRVANKVLYDTVPHIFKWRYDHSTAWHVLDRDIFCST 235

BLAST of MC10g1031 vs. NCBI nr
Match: XP_022158673.1 (uncharacterized protein LOC111025136 [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 5.11e-07
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 0

Query: 1   EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIF 41
           E I  L+ RVA+ +  D VPRIL+W+CG+S AW V+++EIF
Sbjct: 168 ETISCLTSRVAHPIKPDGVPRILKWKCGYSPAWVVMEKEIF 208

BLAST of MC10g1031 vs. NCBI nr
Match: XP_038893529.1 (uncharacterized protein LOC120082434 [Benincasa hispida])

HSP 1 Score: 53.1 bits (126), Expect = 7.78e-07
Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0

Query: 1   EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRSTTVSL 48
           E++ S++G VA +  + A+PRILRW C HS ++  L+R+IF S  VS+
Sbjct: 82  EILSSIAGNVAIRKSKVAIPRILRWSCSHSVSFKTLERDIFESENVSV 129

BLAST of MC10g1031 vs. NCBI nr
Match: XP_022136676.1 (uncharacterized protein LOC111008328 [Momordica charantia])

HSP 1 Score: 52.8 bits (125), Expect = 1.77e-06
Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 1  EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRS 43
          E I +LS RVA ++ +DA+PR+LRW C +S A++VL+RE+F +
Sbjct: 24 ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFEN 66

BLAST of MC10g1031 vs. ExPASy TrEMBL
Match: A0A6J1E0A9 (uncharacterized protein LOC111025209 OS=Momordica charantia OX=3673 GN=LOC111025209 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.05e-11
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 1   EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRSTTVS 47
           E+I SLSG +   V +D VPRIL+WR  HSTA+H+L REIFRS+TVS
Sbjct: 208 EIISSLSGHIVTIVSQDVVPRILQWRYEHSTAYHMLAREIFRSSTVS 254

BLAST of MC10g1031 vs. ExPASy TrEMBL
Match: A0A6J1DP34 (uncharacterized protein LOC111021802 OS=Momordica charantia OX=3673 GN=LOC111021802 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.75e-11
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 1   EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRST 44
           + I SLS RVANKV  D VP I +WR  HSTAWHVLDR+IF ST
Sbjct: 192 DTISSLSMRVANKVLYDTVPHIFKWRYDHSTAWHVLDRDIFCST 235

BLAST of MC10g1031 vs. ExPASy TrEMBL
Match: A0A6J1DWS4 (uncharacterized protein LOC111025136 OS=Momordica charantia OX=3673 GN=LOC111025136 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.47e-07
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 0

Query: 1   EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIF 41
           E I  L+ RVA+ +  D VPRIL+W+CG+S AW V+++EIF
Sbjct: 168 ETISCLTSRVAHPIKPDGVPRILKWKCGYSPAWVVMEKEIF 208

BLAST of MC10g1031 vs. ExPASy TrEMBL
Match: A0A6J1C463 (uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008328 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.56e-07
Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 1  EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRS 43
          E I +LS RVA ++ +DA+PR+LRW C +S A++VL+RE+F +
Sbjct: 24 ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFEN 66

BLAST of MC10g1031 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.01e-06
Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 1   EVIFSLSGRVANKVFEDAVPRILRWRCGHSTAWHVLDREIFRS 43
           E I +LS RVA ++ +DA+PR+LRW C +S A++VL+RE+F +
Sbjct: 240 ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFEN 282

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022158744.11.04e-1063.83uncharacterized protein LOC111025209 [Momordica charantia][more]
XP_022154561.11.81e-1068.18uncharacterized protein LOC111021802 [Momordica charantia][more]
XP_022158673.15.11e-0753.66uncharacterized protein LOC111025136 [Momordica charantia][more]
XP_038893529.17.78e-0745.83uncharacterized protein LOC120082434 [Benincasa hispida][more]
XP_022136676.11.77e-0651.16uncharacterized protein LOC111008328 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1E0A95.05e-1163.83uncharacterized protein LOC111025209 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DP348.75e-1168.18uncharacterized protein LOC111021802 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1DWS42.47e-0753.66uncharacterized protein LOC111025136 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1C4638.56e-0751.16uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1DRZ72.01e-0651.16uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1031.1MC10g1031.1mRNA