Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACTCGGCCACCTCCAGAATCTGCGCCCACGATCAGGAAGCGACGTCGTTTAGTTGTAGTTGGACTTCCTCCATGGACGATCTCATCATGTTTGACACTACAGCAGCAACAACATCAGACGACTACTACAATCGCGGGATCTTTTCTTCTTCTTCTTTTTCTTCTTTGAACAATTATTGTTCTCCGGAGGCCGATGGTGATCTTGATGACACTGCAACTTCTTCTCCTCATCCTTCCATTCCCGCGGTTCGCCTTTTTTAATTTCTCTTTTCCCTCTTCTCCTGGTCCCGCCATTGTTTCTTTTGAGTTTCTTTAAAAAAGAAAAAAGAAAATTGTTTTACGAGAATTTATTTTTTATTTTAAATATACAAAATTTTTGTCTCTTATTTATTTTTTAATATTTATTATGCATTTTATAAGTCTGAGAATCATAAAATAGTACTTTTCTTTGTGTTTTGAAAAAAAAATGAGATCGGAAACAATAAATTTGATTTTGTGGATTCTAAAATTTGTATACAATTTTGAAAACGTTTCCTAAACATAAGAAACGAGAAACAAAAGTATCAGATATCAATCGTTTATATCTTTTGAAAATTGAAAAACAATAAACAAGAAGCGGTCGGGAGAAAAATGTTAATTACCAAAGGGGTTCTTTATTTTCTTTAGTTACTTTTTTTAACTTGGTAATTTCGTTTTTTCTTTTGAGTCAGATGGGTGAGCTTAATAAAAAGCAAACGAATAAGAAGATGGATCAAATGATGATCACTGAAGCAAAGAAACACAAGGAGGTTTAATTTCTAATATACATTTACAGCTTGAAAATGTATATATGTTTGATCATTTAAGACATTATTCTGAGACATAATCTAACACATTTTTCTTTTTTTTGTTTTTGTTTTTTTTTTGTTTAGGGAAAAGGAAGTGAATGTGAAGAATGTGGGGAGATTGAAGATAGAATTGAAGTGGGTTTTGTAGGGAGGGATAATAAGAACTGCAGCACAGGACTTAAGCATATAGGCCTTTGTTTAGTTCCTGTCACCATGGTTGTCAATTATTTTGGT
mRNA sequence
ATGGAAAACTCGGCCACCTCCAGAATCTGCGCCCACGATCAGGAAGCGACGTCGTTTAGTTGTAGTTGGACTTCCTCCATGGACGATCTCATCATGTTTGACACTACAGCAGCAACAACATCAGACGACTACTACAATCGCGGGATCTTTTCTTCTTCTTCTTTTTCTTCTTTGAACAATTATTGTTCTCCGGAGGCCGATGGTGATCTTGATGACACTGCAACTTCTTCTCCTCATCCTTCCATTCCCGCGGGAAAAGGAAGTGAATGTGAAGAATGTGGGGAGATTGAAGATAGAATTGAAGTGGGTTTTGTAGGGAGGGATAATAAGAACTGCAGCACAGGACTTAAGCATATAGGCCTTTGTTTAGTTCCTGTCACCATGGTTGTCAATTATTTTGGT
Coding sequence (CDS)
ATGGAAAACTCGGCCACCTCCAGAATCTGCGCCCACGATCAGGAAGCGACGTCGTTTAGTTGTAGTTGGACTTCCTCCATGGACGATCTCATCATGTTTGACACTACAGCAGCAACAACATCAGACGACTACTACAATCGCGGGATCTTTTCTTCTTCTTCTTTTTCTTCTTTGAACAATTATTGTTCTCCGGAGGCCGATGGTGATCTTGATGACACTGCAACTTCTTCTCCTCATCCTTCCATTCCCGCGGGAAAAGGAAGTGAATGTGAAGAATGTGGGGAGATTGAAGATAGAATTGAAGTGGGTTTTGTAGGGAGGGATAATAAGAACTGCAGCACAGGACTTAAGCATATAGGCCTTTGTTTAGTTCCTGTCACCATGGTTGTCAATTATTTTGGT
Protein sequence
MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNNYCSPEADGDLDDTATSSPHPSIPAGKGSECEECGEIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG
Homology
BLAST of MC10g1028 vs. NCBI nr
Match:
XP_022151000.1 (uncharacterized protein LOC111019020 [Momordica charantia])
HSP 1 Score: 257 bits (657), Expect = 7.96e-86
Identity = 134/160 (83.75%), Postives = 134/160 (83.75%), Query Frame = 0
Query: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN
Sbjct: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
Query: 61 YCSPEADGDLDDTATSSPHPSIPA--------------------------GKGSECEECG 120
YCSPEADGDLDDTATSSPHPSIPA GKGSECEECG
Sbjct: 61 YCSPEADGDLDDTATSSPHPSIPAMGELNKKQTNKKMDQMMITEAKKHKEGKGSECEECG 120
Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG
Sbjct: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 160
BLAST of MC10g1028 vs. NCBI nr
Match:
XP_022989755.1 (uncharacterized protein LOC111486825 [Cucurbita maxima])
HSP 1 Score: 126 bits (316), Expect = 3.83e-34
Identity = 81/159 (50.94%), Postives = 94/159 (59.12%), Query Frame = 0
Query: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
MENSA S+IC Q S SWTSSMDDL++FD + TTS + N +FSSS
Sbjct: 1 MENSAISKICTQKQVDQDHS-SWTSSMDDLLLFDY-SKTTSYHFQNAAVFSSS------- 60
Query: 61 YCSPEADGDLDDTATSSPHPSIPAG-------------------------KGSECEECGE 120
+ D DL DTATS PHPSI + +G E EE GE
Sbjct: 61 ----DDDDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGE 120
Query: 121 IEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 VEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of MC10g1028 vs. NCBI nr
Match:
XP_022941575.1 (uncharacterized protein LOC111446888 [Cucurbita moschata])
HSP 1 Score: 125 bits (313), Expect = 1.09e-33
Identity = 82/160 (51.25%), Postives = 92/160 (57.50%), Query Frame = 0
Query: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
MENSA SRIC Q S SWTSSMDDL++FD + T S + N +FSSS
Sbjct: 1 MENSAISRICTQKQVDQDHS-SWTSSMDDLLLFDH-SKTISYHFQNAAVFSSSD------ 60
Query: 61 YCSPEADGDLDDTATSSPHPSIPAG--------------------------KGSECEECG 120
D DL DTATS PHPSI + KG E EE G
Sbjct: 61 ------DDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFG 120
Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
E+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 EVEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of MC10g1028 vs. NCBI nr
Match:
KAG7031402.1 (hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 123 bits (309), Expect = 4.41e-33
Identity = 82/160 (51.25%), Postives = 91/160 (56.88%), Query Frame = 0
Query: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
MENSA SRIC Q S SWTSSMDDL++FD + T S N +FSSS
Sbjct: 1 MENSAISRICTQKQVDEDHS-SWTSSMDDLLLFDH-SKTISYHIQNAAVFSSSD------ 60
Query: 61 YCSPEADGDLDDTATSSPHPSIPAG--------------------------KGSECEECG 120
D DL DTATS PHPSI + KG E EE G
Sbjct: 61 ------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQQLSAMINQTKHKGKEIEEFG 120
Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
E+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 EVEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of MC10g1028 vs. NCBI nr
Match:
KAG6600765.1 (hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 122 bits (307), Expect = 9.40e-33
Identity = 82/162 (50.62%), Postives = 91/162 (56.17%), Query Frame = 0
Query: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
MENSA SRIC Q S SWTSSMDDL++FD + T S N +FSSS
Sbjct: 1 MENSAISRICTQKQVDEDHS-SWTSSMDDLLLFDH-SKTISYHIQNAAVFSSSD------ 60
Query: 61 YCSPEADGDLDDTATSSPHPSIPAG----------------------------KGSECEE 120
D DL DTATS PHPSI + KG E EE
Sbjct: 61 ------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQQQQLSAMINQTKHKGKEIEE 120
Query: 121 CGEIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
GE+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 FGEVEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 147
BLAST of MC10g1028 vs. ExPASy TrEMBL
Match:
A0A6J1DA11 (uncharacterized protein LOC111019020 OS=Momordica charantia OX=3673 GN=LOC111019020 PE=4 SV=1)
HSP 1 Score: 257 bits (657), Expect = 3.85e-86
Identity = 134/160 (83.75%), Postives = 134/160 (83.75%), Query Frame = 0
Query: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN
Sbjct: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
Query: 61 YCSPEADGDLDDTATSSPHPSIPA--------------------------GKGSECEECG 120
YCSPEADGDLDDTATSSPHPSIPA GKGSECEECG
Sbjct: 61 YCSPEADGDLDDTATSSPHPSIPAMGELNKKQTNKKMDQMMITEAKKHKEGKGSECEECG 120
Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG
Sbjct: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 160
BLAST of MC10g1028 vs. ExPASy TrEMBL
Match:
A0A6J1JN91 (uncharacterized protein LOC111486825 OS=Cucurbita maxima OX=3661 GN=LOC111486825 PE=4 SV=1)
HSP 1 Score: 126 bits (316), Expect = 1.86e-34
Identity = 81/159 (50.94%), Postives = 94/159 (59.12%), Query Frame = 0
Query: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
MENSA S+IC Q S SWTSSMDDL++FD + TTS + N +FSSS
Sbjct: 1 MENSAISKICTQKQVDQDHS-SWTSSMDDLLLFDY-SKTTSYHFQNAAVFSSS------- 60
Query: 61 YCSPEADGDLDDTATSSPHPSIPAG-------------------------KGSECEECGE 120
+ D DL DTATS PHPSI + +G E EE GE
Sbjct: 61 ----DDDDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGE 120
Query: 121 IEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 VEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of MC10g1028 vs. ExPASy TrEMBL
Match:
A0A6J1FU25 (uncharacterized protein LOC111446888 OS=Cucurbita moschata OX=3662 GN=LOC111446888 PE=4 SV=1)
HSP 1 Score: 125 bits (313), Expect = 5.29e-34
Identity = 82/160 (51.25%), Postives = 92/160 (57.50%), Query Frame = 0
Query: 1 MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
MENSA SRIC Q S SWTSSMDDL++FD + T S + N +FSSS
Sbjct: 1 MENSAISRICTQKQVDQDHS-SWTSSMDDLLLFDH-SKTISYHFQNAAVFSSSD------ 60
Query: 61 YCSPEADGDLDDTATSSPHPSIPAG--------------------------KGSECEECG 120
D DL DTATS PHPSI + KG E EE G
Sbjct: 61 ------DDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFG 120
Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
E+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 EVEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145
BLAST of MC10g1028 vs. ExPASy TrEMBL
Match:
A0A0A0L2F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1)
HSP 1 Score: 108 bits (269), Expect = 5.64e-27
Identity = 80/178 (44.94%), Postives = 98/178 (55.06%), Query Frame = 0
Query: 1 MENSATSRICAHDQEAT-------SFSCSWTSSMDDLIMFDTTAATTSDDY--YNRGIFS 60
MENSATSRIC+H +E T S S +SSMDDL+MFD T S Y + +
Sbjct: 1 MENSATSRICSHREEDTCEPMFHEDRSWSTSSSMDDLLMFDVRTTTHSSSYESFQTSLCC 60
Query: 61 SSSFSSLNNYCSPEA------------DGDLDDTATSSPHPSIPAG-------------- 120
SS+ ++ P A D DL+DTATS PHPSI +
Sbjct: 61 SSA---VDGGAQPSASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDERSSKQQKKQRA 120
Query: 121 -------KGSECEECGEIEDRI-EVGFVGRDNK--NCSTGLKHIGLCLVPVTMVVNYF 133
KG+ E+ GE+EDRI EVGFVGRDN +CSTGLK+IGLCLVPV+M +NYF
Sbjct: 121 MMNQTKHKGNGSEDYGEVEDRITEVGFVGRDNNKNHCSTGLKNIGLCLVPVSMALNYF 175
BLAST of MC10g1028 vs. ExPASy TrEMBL
Match:
A0A5D3BKS2 (Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00160 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 2.29e-23
Identity = 81/177 (45.76%), Postives = 105/177 (59.32%), Query Frame = 0
Query: 1 MENSATSRICAHDQE----ATSF---SCSWTSSMDDLIMFD--TTAATTSDDYYNRGIFS 60
MENSA SRIC+H +E AT S S +SSMDDL+MFD +T ++S +++ +
Sbjct: 1 MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCC 60
Query: 61 SSSF-----SSLNNYCSPE----ADGDLDDTATSSPHPSIPA------------------ 120
SS+ +S +++ AD DL+DTATS PHPSI +
Sbjct: 61 SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120
Query: 121 -----GKGSECEECGEIEDRI-EVGFVGRDN-KN-CSTGLKHIGLCLVPVTMVVNYF 133
GKGSE + GE+EDRI +VG VGRDN KN CSTGLK+IGLCLVPV+M +NYF
Sbjct: 121 QTKHKGKGSE--DYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYF 175
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022151000.1 | 7.96e-86 | 83.75 | uncharacterized protein LOC111019020 [Momordica charantia] | [more] |
| XP_022989755.1 | 3.83e-34 | 50.94 | uncharacterized protein LOC111486825 [Cucurbita maxima] | [more] |
| XP_022941575.1 | 1.09e-33 | 51.25 | uncharacterized protein LOC111446888 [Cucurbita moschata] | [more] |
| KAG7031402.1 | 4.41e-33 | 51.25 | hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6600765.1 | 9.40e-33 | 50.62 | hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DA11 | 3.85e-86 | 83.75 | uncharacterized protein LOC111019020 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
| A0A6J1JN91 | 1.86e-34 | 50.94 | uncharacterized protein LOC111486825 OS=Cucurbita maxima OX=3661 GN=LOC111486825... | [more] |
| A0A6J1FU25 | 5.29e-34 | 51.25 | uncharacterized protein LOC111446888 OS=Cucurbita moschata OX=3662 GN=LOC1114468... | [more] |
| A0A0A0L2F7 | 5.64e-27 | 44.94 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1 | [more] |
| A0A5D3BKS2 | 2.29e-23 | 45.76 | Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
