MC10g1021 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1021
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 9760579 .. 9760668 (-)
RNA-Seq ExpressionMC10g1021
SyntenyMC10g1021
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGATGAAACAAGAAACAGCTTCGAAGAATGCTATTTTGGTTCCCAATGTTTCTTCATGCCCAACGAGATGCGTCAACCTCGGGTCGCG

mRNA sequence

GGGGATGAAACAAGAAACAGCTTCGAAGAATGCTATTTTGGTTCCCAATGTTTCTTCATGCCCAACGAGATGCGTCAACCTCGGGTCGCG

Coding sequence (CDS)

GGGGATGAAACAAGAAACAGCTTCGAAGAATGCTATTTTGGTTCCCAATGTTTCTTCATGCCCAACGAGATGCGTCAACCTCGGGTCGCG

Protein sequence

GDETRNSFEECYFGSQCFFMPNEMRQPRVA
Homology
BLAST of MC10g1021 vs. NCBI nr
Match: KAG6585932.1 (hypothetical protein SDJN03_18665, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 55.5 bits (132), Expect = 1.88e-08
Identity = 24/30 (80.00%), Postives = 24/30 (80.00%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
          GD TRN  EE YFGSQCFF PNEMRQPR A
Sbjct: 67 GDGTRNGSEESYFGSQCFFTPNEMRQPRDA 96

BLAST of MC10g1021 vs. NCBI nr
Match: TYK01092.1 (hypothetical protein E5676_scaffold264G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 50.1 bits (118), Expect = 6.15e-07
Identity = 22/30 (73.33%), Postives = 22/30 (73.33%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
          GD  RN  EE YFGSQCF  PNEMRQPR A
Sbjct: 5  GDGRRNGSEESYFGSQCFSTPNEMRQPRDA 34

BLAST of MC10g1021 vs. NCBI nr
Match: TYK24171.1 (hypothetical protein E5676_scaffold75540G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 50.1 bits (118), Expect = 2.40e-06
Identity = 22/30 (73.33%), Postives = 22/30 (73.33%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
          GD  RN  EE YFGSQCF  PNEMRQPR A
Sbjct: 67 GDGRRNGSEESYFGSQCFSTPNEMRQPRDA 96

BLAST of MC10g1021 vs. NCBI nr
Match: KAA0062690.1 (hypothetical protein E6C27_scaffold47124G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 50.1 bits (118), Expect = 8.86e-06
Identity = 22/30 (73.33%), Postives = 22/30 (73.33%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
          GD  RN  EE YFGSQCF  PNEMRQPR A
Sbjct: 67 GDGRRNGSEESYFGSQCFSTPNEMRQPRDA 96

BLAST of MC10g1021 vs. NCBI nr
Match: GEZ85394.1 (putative niFe hydrogenase-like protein [Tanacetum cinerariifolium])

HSP 1 Score: 47.0 bits (110), Expect = 1.35e-04
Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
          GD  RNSFEE  +GSQCF M NEMRQPR A
Sbjct: 66 GDGKRNSFEERNWGSQCFSMLNEMRQPRDA 95

BLAST of MC10g1021 vs. ExPASy TrEMBL
Match: A0A5D3BQP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001190 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.98e-07
Identity = 22/30 (73.33%), Postives = 22/30 (73.33%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
          GD  RN  EE YFGSQCF  PNEMRQPR A
Sbjct: 5  GDGRRNGSEESYFGSQCFSTPNEMRQPRDA 34

BLAST of MC10g1021 vs. ExPASy TrEMBL
Match: A0A5D3DKM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75540G00010 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.16e-06
Identity = 22/30 (73.33%), Postives = 22/30 (73.33%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
          GD  RN  EE YFGSQCF  PNEMRQPR A
Sbjct: 67 GDGRRNGSEESYFGSQCFSTPNEMRQPRDA 96

BLAST of MC10g1021 vs. ExPASy TrEMBL
Match: A0A5A7V623 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47124G00010 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.29e-06
Identity = 22/30 (73.33%), Postives = 22/30 (73.33%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
          GD  RN  EE YFGSQCF  PNEMRQPR A
Sbjct: 67 GDGRRNGSEESYFGSQCFSTPNEMRQPRDA 96

BLAST of MC10g1021 vs. ExPASy TrEMBL
Match: B9T8J1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2119300 PE=4 SV=1)

HSP 1 Score: 42.4 bits (98), Expect = 3.35e-04
Identity = 18/27 (66.67%), Postives = 20/27 (74.07%), Query Frame = 0

Query: 1  GDETRNSFEECYFGSQCFFMPNEMRQP 27
          GD  RN  EE ++GSQCF MPNEM QP
Sbjct: 5  GDGKRNDSEERHWGSQCFSMPNEMSQP 31

BLAST of MC10g1021 vs. ExPASy TrEMBL
Match: A0A059AQQ4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01852 PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 6.38e-04
Identity = 20/30 (66.67%), Postives = 21/30 (70.00%), Query Frame = 0

Query: 1   GDETRNSFEECYFGSQCFFMPNEMRQPRVA 30
           GD  RN  EE  +GSQCF  PNEMRQPR A
Sbjct: 130 GDGKRNGSEERNWGSQCFSTPNEMRQPRDA 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6585932.11.88e-0880.00hypothetical protein SDJN03_18665, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK01092.16.15e-0773.33hypothetical protein E5676_scaffold264G001190 [Cucumis melo var. makuwa][more]
TYK24171.12.40e-0673.33hypothetical protein E5676_scaffold75540G00010 [Cucumis melo var. makuwa][more]
KAA0062690.18.86e-0673.33hypothetical protein E6C27_scaffold47124G00010 [Cucumis melo var. makuwa][more]
GEZ85394.11.35e-0473.33putative niFe hydrogenase-like protein [Tanacetum cinerariifolium][more]
Match NameE-valueIdentityDescription
A0A5D3BQP22.98e-0773.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DKM41.16e-0673.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6234.29e-0673.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
B9T8J13.35e-0466.67Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2119300 PE=4 SV=1[more]
A0A059AQQ46.38e-0466.67Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01852 PE=4 SV... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1021.1MC10g1021.1mRNA