MC10g0995 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0995
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Calcium-binding EF-hand family protein
Location	MC10: 9145015 .. 9145137 (+)
RNA-Seq Expression	MC10g0995
Synteny	MC10g0995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGACTTCGAGGGCGATGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCACATTAAGCCCCGATTTGATGGATGTGTCTCGCTACTGGCTCCAAGAAAGCCTCCGGCGAGAATTT

mRNA sequence

GGGGACTTCGAGGGCGATGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCACATTAAGCCCCGATTTGATGGATGTGTCTCGCTACTGGCTCCAAGAAAGCCTCCGGCGAGAATTT

Coding sequence (CDS)

GGGGACTTCGAGGGCGATGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCACATTAAGCCCCGATTTGATGGATGTGTCTCGCTACTGGCTCCAAGAAAGCCTCCGGCGAGAATTT

Protein sequence

GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF

Homology

[Close]

BLAST of MC10g0995 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.1e-09
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 42
           GDF+ DGALNQMEFCVLMF LSPDLM+ SR  + E +  EF
Sbjct: 84  GDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of MC10g0995 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.0e-09
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 42
           GDF+ DGALNQMEFCVLMF LSP+LM+ SR  + E +  EF
Sbjct: 84  GDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of MC10g0995 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 9.9e-08
Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRRE 41
           GD +GDGALNQ EFCVLM  LSP++M+ +  WL+++L +E
Sbjct: 86  GDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of MC10g0995 vs. NCBI nr
Match: XP_022144078.1 (calcium-binding protein PBP1-like [Momordica charantia])

HSP 1 Score: 85.5 bits (210), Expect = 5.46e-20
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSPDLMD SRYWLQESLRREF
Sbjct: 78  GDFDGDGALNQMEFCVLMFRLSPDLMDASRYWLQESLRREF 118

[Close]

BLAST of MC10g0995 vs. NCBI nr
Match: XP_015897214.1 (calcium-binding protein KRP1-like [Ziziphus jujuba])

HSP 1 Score: 76.3 bits (186), Expect = 2.33e-16
Identity = 32/41 (78.05%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSP+LM+ SRYWL+E+L++EF
Sbjct: 74  GDFDGDGALNQMEFCVLMFRLSPELMEESRYWLEEALQQEF 114

[Close]

BLAST of MC10g0995 vs. NCBI nr
Match: XP_022985284.1 (calcium-binding protein PBP1-like [Cucurbita maxima])

HSP 1 Score: 76.3 bits (186), Expect = 2.58e-16
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSP+LMD SRY  Q+SLRREF
Sbjct: 78  GDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRREF 118

[Close]

BLAST of MC10g0995 vs. NCBI nr
Match: XP_004152909.1 (calcium-binding protein KRP1 [Cucumis sativus] >KGN56165.1 hypothetical protein Csa_010073 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 2.15e-15
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSP+LM+ SRY   ESLRREF
Sbjct: 78  GDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 118

[Close]

BLAST of MC10g0995 vs. NCBI nr
Match: XP_009350804.1 (PREDICTED: calcium-binding protein PBP1-like [Pyrus x bretschneideri])

HSP 1 Score: 73.6 bits (179), Expect = 2.76e-15
Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSP+LMD S+ WL++SL++EF
Sbjct: 75  GDFDGDGALNQMEFCVLMFRLSPELMDESKLWLEDSLQQEF 115

[Close]

BLAST of MC10g0995 vs. ExPASy TrEMBL
Match: A0A6J1CSD5 (calcium-binding protein PBP1-like OS=Momordica charantia OX=3673 GN=LOC111013856 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.64e-20
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSPDLMD SRYWLQESLRREF
Sbjct: 78  GDFDGDGALNQMEFCVLMFRLSPDLMDASRYWLQESLRREF 118

[Close]

BLAST of MC10g0995 vs. ExPASy TrEMBL
Match: A0A6P4AM56 (calcium-binding protein KRP1-like OS=Ziziphus jujuba OX=326968 GN=LOC107430853 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.13e-16
Identity = 32/41 (78.05%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSP+LM+ SRYWL+E+L++EF
Sbjct: 74  GDFDGDGALNQMEFCVLMFRLSPELMEESRYWLEEALQQEF 114

[Close]

BLAST of MC10g0995 vs. ExPASy TrEMBL
Match: A0A6J1JCW0 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111483323 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.25e-16
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSP+LMD SRY  Q+SLRREF
Sbjct: 78  GDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRREF 118

[Close]

BLAST of MC10g0995 vs. ExPASy TrEMBL
Match: A0A0A0L2H0 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G081900 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.04e-15
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSP+LM+ SRY   ESLRREF
Sbjct: 78  GDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 118

[Close]

BLAST of MC10g0995 vs. ExPASy TrEMBL
Match: A0A2P5BW49 (Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_205520 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.68e-15
Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 41
           GDF+GDGALNQMEFCVLMF LSP+LM+ SR WL+E+L++EF
Sbjct: 74  GDFDGDGALNQMEFCVLMFRLSPELMEDSRLWLEEALQQEF 114

[Close]

BLAST of MC10g0995 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 61.2 bits (147), Expect = 2.2e-10
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 42
           GDF+ DGALNQMEFCVLMF LSPDLM+ SR  + E +  EF
Sbjct: 84  GDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of MC10g0995 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 59.7 bits (143), Expect = 6.4e-10
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRREF 42
           GDF+ DGALNQMEFCVLMF LSP+LM+ SR  + E +  EF
Sbjct: 84  GDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of MC10g0995 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 56.2 bits (134), Expect = 7.1e-09
Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 1   GDFEGDGALNQMEFCVLMFTLSPDLMDVSRYWLQESLRRE 41
           GD +GDGALNQ EFCVLM  LSP++M+ +  WL+++L +E
Sbjct: 86  GDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

The following BLAST results are available for this feature:

BLAST of MC10g0995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81831	3.1e-09	68.29	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9LSQ6	9.0e-09	65.85	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
Q9ZPX9	9.9e-08	57.50	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]

BLAST of MC10g0995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144078.1	5.46e-20	92.68	calcium-binding protein PBP1-like [Momordica charantia]	[more]
XP_015897214.1	2.33e-16	78.05	calcium-binding protein KRP1-like [Ziziphus jujuba]	[more]
XP_022985284.1	2.58e-16	82.93	calcium-binding protein PBP1-like [Cucurbita maxima]	[more]
XP_004152909.1	2.15e-15	80.49	calcium-binding protein KRP1 [Cucumis sativus] >KGN56165.1 hypothetical protein ...	[more]
XP_009350804.1	2.76e-15	75.61	PREDICTED: calcium-binding protein PBP1-like [Pyrus x bretschneideri]	[more]

BLAST of MC10g0995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSD5	2.64e-20	92.68	calcium-binding protein PBP1-like OS=Momordica charantia OX=3673 GN=LOC111013856...	[more]
A0A6P4AM56	1.13e-16	78.05	calcium-binding protein KRP1-like OS=Ziziphus jujuba OX=326968 GN=LOC107430853 P...	[more]
A0A6J1JCW0	1.25e-16	82.93	calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111483323 PE...	[more]
A0A0A0L2H0	1.04e-15	80.49	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G081900 PE=...	[more]
A0A2P5BW49	2.68e-15	75.61	Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_205520 PE=4 SV=1	[more]

BLAST of MC10g0995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27280.1	2.2e-10	68.29	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	6.4e-10	65.85	pinoid-binding protein 1	[more]
AT2G46600.1	7.1e-09	57.50	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47319:SF21	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..41
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0995.1	MC10g0995.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding