MC10g0993 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0993
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DUF4218 domain-containing protein
Location	MC10: 9077034 .. 9077621 (-)
RNA-Seq Expression	MC10g0993
Synteny	MC10g0993

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTTGCATAATCATTTTAATATTGATATATCTCAGCACCATGTTTATCAATATATCGTGTATGAGATTGGAACTCGATTTAAAGATTATCGAGCGAGGTTACATCAGTACTATATGAAATTTAGGGATCCAGCACGTGCTCGCCAGAAATCCTATCGAGACATTAAACCCGAGGACTGGAATGTTTTATGCGATAGATGGGAATCTCCAGCATGGAAGGTAATTACAATATGATGTTGATTCAAAGTTACCATTTTTATAAATAAAATCTTGAAACTATATATTTATTTTTTAGGAGAAATCTGCAAAAAATAAATTAGCACGTAGGAAATTGAGATTCAACCATCGAGGTGGACCGAAGCCATTTCAGTGTCATCGAGAAGATAAGGTGTGAACATATCATTTATTTGAATTATCCTGGTTCTATATTTCAAGTTCTTATTTTTCTTACTATGATTTAATAATCTCTTGGAATAGAAAAAAGAAGATGGGACATATTTAAGTCCCATTCAAATATTTTACGAGACACATTATTCCGTGGAAAAAGATTGGATTAACCTAGAAGCCAAAGCTGCTTATGTAAGTGTA

mRNA sequence

CGTTTGCATAATCATTTTAATATTGATATATCTCAGCACCATGTTTATCAATATATCGTGTATGAGATTGGAACTCGATTTAAAGATTATCGAGCGAGGTTACATCAGTACTATATGAAATTTAGGGATCCAGCACGTGCTCGCCAGAAATCCTATCGAGACATTAAACCCGAGGACTGGAATGTTTTATGCGATAGATGGGAATCTCCAGCATGGAAGGAGAAATCTGCAAAAAATAAATTAGCACGTAGGAAATTGAGATTCAACCATCGAGGTGGACCGAAGCCATTTCAGTGTCATCGAGAAGATAAGAAAAAAGAAGATGGGACATATTTAAGTCCCATTCAAATATTTTACGAGACACATTATTCCGTGGAAAAAGATTGGATTAACCTAGAAGCCAAAGCTGCTTATGTAAGTGTA

Coding sequence (CDS)

CGTTTGCATAATCATTTTAATATTGATATATCTCAGCACCATGTTTATCAATATATCGTGTATGAGATTGGAACTCGATTTAAAGATTATCGAGCGAGGTTACATCAGTACTATATGAAATTTAGGGATCCAGCACGTGCTCGCCAGAAATCCTATCGAGACATTAAACCCGAGGACTGGAATGTTTTATGCGATAGATGGGAATCTCCAGCATGGAAGGAGAAATCTGCAAAAAATAAATTAGCACGTAGGAAATTGAGATTCAACCATCGAGGTGGACCGAAGCCATTTCAGTGTCATCGAGAAGATAAGAAAAAAGAAGATGGGACATATTTAAGTCCCATTCAAATATTTTACGAGACACATTATTCCGTGGAAAAAGATTGGATTAACCTAGAAGCCAAAGCTGCTTATGTAAGTGTA

Protein sequence

RLHNHFNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVLCDRWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKKEDGTYLSPIQIFYETHYSVEKDWINLEAKAAYVSV

Homology

[Close]

BLAST of MC10g0993 vs. NCBI nr
Match: XP_038895320.1 (uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida])

HSP 1 Score: 173 bits (438), Expect = 6.13e-50
Identity = 78/136 (57.35%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 4   NHFNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVL 63
           N F++DISQ H+ +YI YEIG RFKDYR  L+++Y K+ DP  AR+  Y+    +DWN+L
Sbjct: 211 NQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEARRNPYKYTTTDDWNIL 270

Query: 64  CDRWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKKEDGTYLSPIQIFYETHY 123
           CDRWES +WKEKSA+NK++R K+RFNH GG K F   R DK KEDGTY+S I++FYETH 
Sbjct: 271 CDRWESSSWKEKSARNKVSRSKIRFNHCGGSKSFLSRRVDKGKEDGTYISLIEVFYETHC 330

Query: 124 SVEKDWINLEAKAAYV 139
           S  K W++  AK AY+
Sbjct: 331 SASKGWVDQAAKEAYL 346

[Close]

BLAST of MC10g0993 vs. NCBI nr
Match: XP_038895321.1 (uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida])

HSP 1 Score: 172 bits (437), Expect = 6.75e-50
Identity = 78/135 (57.78%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 4   NHFNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVL 63
           N F++DISQ H+ +YI YEIG RFKDYR  L+++Y K+ DP  AR+  Y+    +DWN+L
Sbjct: 211 NQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEARRNPYKYTTTDDWNIL 270

Query: 64  CDRWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKKEDGTYLSPIQIFYETHY 123
           CDRWES +WKEKSA+NK++R K+RFNH GG K F   R DK KEDGTY+S I++FYETH 
Sbjct: 271 CDRWESSSWKEKSARNKVSRSKIRFNHCGGSKSFLSRRVDKGKEDGTYISLIEVFYETHC 330

Query: 124 SVEKDWINLEAKAAY 138
           S  K W++  AK AY
Sbjct: 331 SASKGWVDQAAKEAY 345

[Close]

BLAST of MC10g0993 vs. NCBI nr
Match: XP_022159083.1 (uncharacterized protein LOC111025525 [Momordica charantia])

HSP 1 Score: 167 bits (422), Expect = 1.48e-49
Identity = 75/95 (78.95%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 6   FNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVLCD 65
           F +DISQ HV++YI+YEIGTRFKDYRA+LH++Y K RDPARARQK Y+DIK E WN+LCD
Sbjct: 93  FAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEXWNILCD 152

Query: 66  RWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCH 100
           RWESPAWKEKSA+NK+AR KLRFNHRGGPKPF CH
Sbjct: 153 RWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 187

[Close]

BLAST of MC10g0993 vs. NCBI nr
Match: XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida])

HSP 1 Score: 172 bits (437), Expect = 2.08e-49
Identity = 78/135 (57.78%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 4   NHFNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVL 63
           N F++DISQ H+ +YI YEIG RFKDYR  L+++Y K+ DP  AR+  Y+    +DWN+L
Sbjct: 211 NQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEARRNPYKYTTTDDWNIL 270

Query: 64  CDRWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKKEDGTYLSPIQIFYETHY 123
           CDRWES +WKEKSA+NK++R K+RFNH GG K F   R DK KEDGTY+S I++FYETH 
Sbjct: 271 CDRWESSSWKEKSARNKVSRSKIRFNHCGGSKSFLSRRVDKGKEDGTYISLIEVFYETHC 330

Query: 124 SVEKDWINLEAKAAY 138
           S  K W++  AK AY
Sbjct: 331 SASKGWVDQAAKEAY 345

[Close]

BLAST of MC10g0993 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 163 bits (413), Expect = 8.70e-48
Identity = 76/101 (75.25%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 6   FNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVLCD 65
           F +DISQ HV++YI+YEIGTRFKDYRA+L+++Y K RD ARARQK Y+DIK EDWN+LCD
Sbjct: 6   FVVDISQPHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWNILCD 65

Query: 66  RWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKK 106
           + ES AWKEKSAKNK+AR KLRFNHRGGPKPFQCHRED ++
Sbjct: 66  KLESLAWKEKSAKNKVARSKLRFNHRGGPKPFQCHREDSEE 106

[Close]

BLAST of MC10g0993 vs. ExPASy TrEMBL
Match: A0A6J1DXU5 (uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025525 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 7.15e-50
Identity = 75/95 (78.95%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 6   FNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVLCD 65
           F +DISQ HV++YI+YEIGTRFKDYRA+LH++Y K RDPARARQK Y+DIK E WN+LCD
Sbjct: 93  FAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEXWNILCD 152

Query: 66  RWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCH 100
           RWESPAWKEKSA+NK+AR KLRFNHRGGPKPF CH
Sbjct: 153 RWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 187

[Close]

BLAST of MC10g0993 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 4.21e-48
Identity = 76/101 (75.25%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 6   FNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVLCD 65
           F +DISQ HV++YI+YEIGTRFKDYRA+L+++Y K RD ARARQK Y+DIK EDWN+LCD
Sbjct: 6   FVVDISQPHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWNILCD 65

Query: 66  RWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKK 106
           + ES AWKEKSAKNK+AR KLRFNHRGGPKPFQCHRED ++
Sbjct: 66  KLESLAWKEKSAKNKVARSKLRFNHRGGPKPFQCHREDSEE 106

[Close]

BLAST of MC10g0993 vs. ExPASy TrEMBL
Match: A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 5.65e-47
Identity = 74/101 (73.27%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 6   FNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVLCD 65
           F + ISQ HV++YI+YEIGTRFKDYRA+LH++Y K RD A ARQK Y+DIK EDWN+LCD
Sbjct: 6   FVVVISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDQAHARQKPYKDIKQEDWNILCD 65

Query: 66  RWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKK 106
           R E PAWKEKSAKNK+A  KLRFNHRG PKPFQCHRED ++
Sbjct: 66  RLEFPAWKEKSAKNKMASSKLRFNHRGEPKPFQCHREDSEE 106

[Close]

BLAST of MC10g0993 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 160 bits (406), Expect = 1.47e-46
Identity = 75/98 (76.53%), Postives = 88/98 (89.80%), Query Frame = 0


Query: 9   DISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKSYRDIKPEDWNVLCDRWE 68
           DISQ HV++YI+YEIGTRFKDYRA+L+++Y K RD ARARQK Y+DIK EDWN+LCD+ E
Sbjct: 14  DISQLHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWNILCDKLE 73

Query: 69  SPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKK 106
           S AWKEKSAKNK+AR KLRFNHRGGPKPFQCHRED ++
Sbjct: 74  SLAWKEKSAKNKVARSKLRFNHRGGPKPFQCHREDSEE 111

[Close]

BLAST of MC10g0993 vs. ExPASy TrEMBL
Match: A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1)

HSP 1 Score: 119 bits (299), Expect = 2.27e-30
Identity = 60/135 (44.44%), Postives = 84/135 (62.22%), Query Frame = 0


Query: 5   HFNIDISQHHVYQYIVYEIGTRFKDYRARLHQYYMKFRDPARARQKS-YRDIKPEDWNVL 64
           HF +D+S+  V ++I  ++   FK YR+ LHQYY +F DP  AR     R   PEDWN L
Sbjct: 20  HFRVDLSKRVVNKFIEQQMQISFKQYRSDLHQYYCEFEDPVEARANPPERLTNPEDWNHL 79

Query: 65  CDRWESPAWKEKSAKNKLARRKLRFNHRGGPKPFQCHREDKKKEDGTYLSPIQIFYETHY 124
           CDRWE+P WKE + KNK  R KL FNHR G K F   + + K ++G+ + P+ +F E+HY
Sbjct: 80  CDRWETPEWKEITKKNKKNRAKLPFNHRAGSKSFLQLQHELKIKEGSDIGPVDLFGESHY 139

Query: 125 SVEKDWINLEAKAAY 138
           + +   +N  A+ AY
Sbjct: 140 NEKDGLVNDNAEDAY 154

The following BLAST results are available for this feature:

BLAST of MC10g0993 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g0993 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895320.1	6.13e-50	57.35	uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida]	[more]
XP_038895321.1	6.75e-50	57.78	uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]	[more]
XP_022159083.1	1.48e-49	78.95	uncharacterized protein LOC111025525 [Momordica charantia]	[more]
XP_038895319.1	2.08e-49	57.78	uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida]	[more]
XP_022143616.1	8.70e-48	75.25	uncharacterized protein LOC111013476 [Momordica charantia]	[more]

BLAST of MC10g0993 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXU5	7.15e-50	78.95	uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CQT5	4.21e-48	75.25	uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DLF1	5.65e-47	73.27	uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1D6S9	1.47e-46	76.53	uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DUH3	2.27e-30	44.44	uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of MC10g0993 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 57..139 e-value: 3.8E-13 score: 49.8
None	No IPR available	PANTHER	PTHR33499	FAMILY NOT NAMED	coord: 5..138
None	No IPR available	PANTHER	PTHR33499:SF17	OS12G0231700 PROTEIN	coord: 5..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0993.1	MC10g0993.1	mRNA