MC10g0992 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0992
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 9065449 .. 9065607 (-)
RNA-Seq ExpressionMC10g0992
SyntenyMC10g0992
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTACATTACAAGCCTATCATGCTTCTTACGGACCACCACAAACGGACCAAGAAATTATGACGATGGTGCTTGGAAAAAGATCAAATTACTTAATAGGAATGGGATATGGACCAAAACCTCCCAAAAGTCAAGCATCATCGCAATACTCAGAGGAC

mRNA sequence

ATGATTACATTACAAGCCTATCATGCTTCTTACGGACCACCACAAACGGACCAAGAAATTATGACGATGGTGCTTGGAAAAAGATCAAATTACTTAATAGGAATGGGATATGGACCAAAACCTCCCAAAAGTCAAGCATCATCGCAATACTCAGAGGAC

Coding sequence (CDS)

ATGATTACATTACAAGCCTATCATGCTTCTTACGGACCACCACAAACGGACCAAGAAATTATGACGATGGTGCTTGGAAAAAGATCAAATTACTTAATAGGAATGGGATATGGACCAAAACCTCCCAAAAGTCAAGCATCATCGCAATACTCAGAGGAC

Protein sequence

MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQASSQYSED
Homology
BLAST of MC10g0992 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 3.36e-15
Identity = 35/54 (64.81%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 1   MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQ-ASSQYSED 53
           MITL+AYHAS G  +T++EIM  VLGKRSNY+IGMGYGPKP +++ +SS+YS++
Sbjct: 107 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDE 160

BLAST of MC10g0992 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 6.06e-15
Identity = 35/54 (64.81%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 1   MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQ-ASSQYSED 53
           MITL+AYHAS G  +T++EIM  VLGKRSNY+IGMGYGPKP +++ +SS+YS++
Sbjct: 112 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDE 165

BLAST of MC10g0992 vs. NCBI nr
Match: XP_022153681.1 (uncharacterized protein LOC111021138 [Momordica charantia])

HSP 1 Score: 65.9 bits (159), Expect = 1.06e-11
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 0

Query: 1   MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKP 41
           MITL+A HAS G  +T++EIM  VLG+RSNY+IGMGYGPKP
Sbjct: 107 MITLKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP 147

BLAST of MC10g0992 vs. NCBI nr
Match: XP_028107648.1 (uncharacterized protein LOC114306575 [Camellia sinensis])

HSP 1 Score: 50.8 bits (120), Expect = 3.54e-06
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 0

Query: 1  MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQASSQYSED 53
          M+ +QA     G P T +EI   VLG++  YL+G G GP+PP   AS  + +D
Sbjct: 41 MVNVQAAAIESGTPLTQEEISRQVLGQKKRYLLGFGSGPQPPTKAASRAHDKD 93

BLAST of MC10g0992 vs. NCBI nr
Match: XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida])

HSP 1 Score: 52.8 bits (125), Expect = 3.91e-06
Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 15  QTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQASS 48
           +TD+EI+ MVLGKRS+Y+ G GYGPKPP+ + +S
Sbjct: 358 KTDEEIIVMVLGKRSSYMNGFGYGPKPPRRKEAS 391

BLAST of MC10g0992 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.62e-15
Identity = 35/54 (64.81%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 1   MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQ-ASSQYSED 53
           MITL+AYHAS G  +T++EIM  VLGKRSNY+IGMGYGPKP +++ +SS+YS++
Sbjct: 107 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDE 160

BLAST of MC10g0992 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.93e-15
Identity = 35/54 (64.81%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 1   MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQ-ASSQYSED 53
           MITL+AYHAS G  +T++EIM  VLGKRSNY+IGMGYGPKP +++ +SS+YS++
Sbjct: 112 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDE 165

BLAST of MC10g0992 vs. ExPASy TrEMBL
Match: A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.13e-12
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 0

Query: 1   MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKP 41
           MITL+A HAS G  +T++EIM  VLG+RSNY+IGMGYGPKP
Sbjct: 107 MITLKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP 147

BLAST of MC10g0992 vs. ExPASy TrEMBL
Match: A0A2G2X5C7 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_07150 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 9.00e-05
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0

Query: 1  MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQASSQ 49
          MI L+A + S     T  EI+ +VLG +S Y+ G+GYGPKP  ++A+ +
Sbjct: 17 MIDLKALYTSGESSMTIDEIVDVVLGTKSGYIKGLGYGPKPNTTRATQR 65

BLAST of MC10g0992 vs. ExPASy TrEMBL
Match: M1DNT9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.90e-04
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0

Query: 1   MITLQAYHASYGPPQTDQEIMTMVLGKRSNYLIGMGYGPKPPKSQASSQ 49
           MI L+A + S     T  EI+  +LGK+S Y+ G+GYGPKP  ++A+ +
Sbjct: 122 MIDLKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQR 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022143616.13.36e-1564.81uncharacterized protein LOC111013476 [Momordica charantia][more]
XP_022148911.16.06e-1564.81uncharacterized protein LOC111017461 [Momordica charantia][more]
XP_022153681.11.06e-1170.73uncharacterized protein LOC111021138 [Momordica charantia][more]
XP_028107648.13.54e-0641.51uncharacterized protein LOC114306575 [Camellia sinensis][more]
XP_038895319.13.91e-0661.76uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1CQT51.62e-1564.81uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1D6S92.93e-1564.81uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DLF15.13e-1270.73uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A2G2X5C79.00e-0542.86Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_07150 PE=4 SV=1[more]
M1DNT91.90e-0442.86Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0992.1MC10g0992.1mRNA