MC10g0973 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0973
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Histone H2A
Location	MC10: 8556051 .. 8556816 (-)
RNA-Seq Expression	MC10g0973
Synteny	MC10g0973

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCAATGGCGGGAAGAGGCAAAACTCTGGGATCTGGAGCCTCCAAGAAGGCCACCTCCAGGAGTAGCAAGGCCGGCCTGCAATTCCCCGTCGGCCGTATCGCTCGTTTCTTGAAAGCCGGTAAATACGCAGAGCGAGTCGGCGCCGGAGCTCCGGTTTACCTCGCCGCCGTCCTCGAATACCTTGCAGCGGAGGTACGTAACTTTCTCCACTTCTTTCGTCTGAGGTTTTCAACTGAACTTCTGTTGCGAGTTGCGAACCGCGTAAATCGCTGATTTCTCTGAACTTTTTGTGAAATTTTTAGGTGCTTGAATTGGCTGGAAATGCCGCAAGAGACAACAAGAAGACTAGAATCGTGCCGCGCCATATCCAGTTGGCTGTGAGGAACGATGAAGAGTTGAGCAAGCTTCTCGGAGACGTGACGATCGCGAATGGCGGTGTTATGCCGAACATTCACAATCTGCTATTGCCGAAGAAGACTGGAAGTTCCAAGGCGTCCGGTGGCGATGATGAACCCTAAATTAAAGAGAAGAAGCGCTCCAGCTGTTCCAATCTGAGAATTAGGTTTTTTCTGTTTCTTTGTTAGTTTATTAATGTATTCTTAACTTCAATCAGAGATCTGATGTGAATACGATCAATCTTCTTCACTCATTGTGGATTTCTTTTCCTTTGATTCGAATTGTTGATTCACAAATTGATTCGAAATTCTTTGGGTTTCTTGTTTCGAGTCTGCAATTAAGAAATGAATGGCTTCTCACTTTACTA

mRNA sequence

AAATCAATGGCGGGAAGAGGCAAAACTCTGGGATCTGGAGCCTCCAAGAAGGCCACCTCCAGGAGTAGCAAGGCCGGCCTGCAATTCCCCGTCGGCCGTATCGCTCGTTTCTTGAAAGCCGGTAAATACGCAGAGCGAGTCGGCGCCGGAGCTCCGGTTTACCTCGCCGCCGTCCTCGAATACCTTGCAGCGGAGGTGCTTGAATTGGCTGGAAATGCCGCAAGAGACAACAAGAAGACTAGAATCGTGCCGCGCCATATCCAGTTGGCTGTGAGGAACGATGAAGAGTTGAGCAAGCTTCTCGGAGACGTGACGATCGCGAATGGCGGTGTTATGCCGAACATTCACAATCTGCTATTGCCGAAGAAGACTGGAAGTTCCAAGGCGTCCGGTGGCGATGATGAACCCTAAATTAAAGAGAAGAAGCGCTCCAGCTGTTCCAATCTGAGAATTAGGTTTTTTCTGTTTCTTTGTTAGTTTATTAATGTATTCTTAACTTCAATCAGAGATCTGATGTGAATACGATCAATCTTCTTCACTCATTGTGGATTTCTTTTCCTTTGATTCGAATTGTTGATTCACAAATTGATTCGAAATTCTTTGGGTTTCTTGTTTCGAGTCTGCAATTAAGAAATGAATGGCTTCTCACTTTACTA

Coding sequence (CDS)

AAATCAATGGCGGGAAGAGGCAAAACTCTGGGATCTGGAGCCTCCAAGAAGGCCACCTCCAGGAGTAGCAAGGCCGGCCTGCAATTCCCCGTCGGCCGTATCGCTCGTTTCTTGAAAGCCGGTAAATACGCAGAGCGAGTCGGCGCCGGAGCTCCGGTTTACCTCGCCGCCGTCCTCGAATACCTTGCAGCGGAGGTGCTTGAATTGGCTGGAAATGCCGCAAGAGACAACAAGAAGACTAGAATCGTGCCGCGCCATATCCAGTTGGCTGTGAGGAACGATGAAGAGTTGAGCAAGCTTCTCGGAGACGTGACGATCGCGAATGGCGGTGTTATGCCGAACATTCACAATCTGCTATTGCCGAAGAAGACTGGAAGTTCCAAGGCGTCCGGTGGCGATGATGAACCCTAA

Protein sequence

KSMAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGSSKASGGDDEP

Homology

[Close]

BLAST of MC10g0973 vs. ExPASy Swiss-Prot
Match: Q9C681 (Probable histone H2A.1 OS=Arabidopsis thaliana OX=3702 GN=At1g51060 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.8e-61
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSG++KKAT+RSSKAGLQFPVGRIARFLK GKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDD 135
           KTG+SK S  DD
Sbjct: 121 KTGASKPSAEDD 132

[Close]

BLAST of MC10g0973 vs. ExPASy Swiss-Prot
Match: Q9LD28 (Histone H2A.6 OS=Arabidopsis thaliana OX=3702 GN=RAT5 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.6e-60
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSG +KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSK 129
           K G+SK
Sbjct: 121 KAGASK 126

[Close]

BLAST of MC10g0973 vs. ExPASy Swiss-Prot
Match: O81826 (Probable histone H2A.3 OS=Arabidopsis thaliana OX=3702 GN=At4g27230 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.4e-60
Identity = 123/131 (93.89%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGK LGSGA+KK+TSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGD 134
           K GSSK +  D
Sbjct: 121 KAGSSKPTEED 131

[Close]

BLAST of MC10g0973 vs. ExPASy Swiss-Prot
Match: A2YVE5 (Probable histone H2A.3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028288 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.2e-59
Identity = 123/134 (91.79%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGK +GS A+KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSS-KASGGDDE 136
           K GSS KA+  DDE
Sbjct: 121 KAGSSAKAAAADDE 134

[Close]

BLAST of MC10g0973 vs. ExPASy Swiss-Prot
Match: Q84NJ4 (Probable histone H2A.3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0427700 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.2e-59
Identity = 123/134 (91.79%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGK +GS A+KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSS-KASGGDDE 136
           K GSS KA+  DDE
Sbjct: 121 KAGSSAKAAAADDE 134

[Close]

BLAST of MC10g0973 vs. NCBI nr
Match: XP_022142823.1 (probable histone H2A.1 [Momordica charantia])

HSP 1 Score: 254 bits (648), Expect = 8.47e-85
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDEP 136
           KTGSSKASGGDDEP
Sbjct: 121 KTGSSKASGGDDEP 134

[Close]

BLAST of MC10g0973 vs. NCBI nr
Match: KAB1215310.1 (putative histone H2A.1 [Morella rubra])

HSP 1 Score: 248 bits (632), Expect = 2.33e-82
Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKA SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKAQSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDE 135
           KTGSSKASGGDD+
Sbjct: 121 KTGSSKASGGDDD 133

[Close]

BLAST of MC10g0973 vs. NCBI nr
Match: XP_022929379.1 (histone H2A.6 [Cucurbita moschata] >XP_022985282.1 histone H2A.6 [Cucurbita maxima] >XP_023552394.1 histone H2A.6 [Cucurbita pepo subsp. pepo] >KAG6577402.1 putative histone H2A.3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015480.1 putative histone H2A.3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248 bits (632), Expect = 2.33e-82
Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDE 135
           K GSSKASGG+DE
Sbjct: 121 KAGSSKASGGEDE 133

[Close]

BLAST of MC10g0973 vs. NCBI nr
Match: XP_039026996.1 (histone H2A.6 [Hibiscus syriacus] >KAE8680192.1 Protein H2A.7 [Hibiscus syriacus])

HSP 1 Score: 247 bits (630), Expect = 4.55e-82
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDE 135
           K G+SKASGGDD+
Sbjct: 121 KAGTSKASGGDDD 133

[Close]

BLAST of MC10g0973 vs. NCBI nr
Match: XP_039041255.1 (histone H2A.6-like [Hibiscus syriacus] >KAE8667030.1 Protein H2A.7 [Hibiscus syriacus])

HSP 1 Score: 246 bits (629), Expect = 6.47e-82
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDE 135
           KTG+SKA GGDD+
Sbjct: 121 KTGTSKAVGGDDD 133

[Close]

BLAST of MC10g0973 vs. ExPASy TrEMBL
Match: A0A6J1CP89 (Histone H2A OS=Momordica charantia OX=3673 GN=LOC111012850 PE=3 SV=1)

HSP 1 Score: 254 bits (648), Expect = 4.10e-85
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDEP 136
           KTGSSKASGGDDEP
Sbjct: 121 KTGSSKASGGDDEP 134

[Close]

BLAST of MC10g0973 vs. ExPASy TrEMBL
Match: A0A6A1VXK6 (Histone H2A OS=Morella rubra OX=262757 GN=CJ030_MR4G018386 PE=3 SV=1)

HSP 1 Score: 248 bits (632), Expect = 1.13e-82
Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKA SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKAQSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDE 135
           KTGSSKASGGDD+
Sbjct: 121 KTGSSKASGGDDD 133

[Close]

BLAST of MC10g0973 vs. ExPASy TrEMBL
Match: A0A6J1J4G3 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111483322 PE=3 SV=1)

HSP 1 Score: 248 bits (632), Expect = 1.13e-82
Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDE 135
           K GSSKASGG+DE
Sbjct: 121 KAGSSKASGGEDE 133

[Close]

BLAST of MC10g0973 vs. ExPASy TrEMBL
Match: A0A6J1ENK4 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111435971 PE=3 SV=1)

HSP 1 Score: 248 bits (632), Expect = 1.13e-82
Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDE 135
           K GSSKASGG+DE
Sbjct: 121 KAGSSKASGGEDE 133

[Close]

BLAST of MC10g0973 vs. ExPASy TrEMBL
Match: A0A6A2XWP3 (Histone H2A OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111392pilonHSYRG00427 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 2.20e-82
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDDE 135
           K G+SKASGGDD+
Sbjct: 121 KAGTSKASGGDDD 133

[Close]

BLAST of MC10g0973 vs. TAIR 10
Match: AT1G51060.1 (histone H2A 10 )

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSG++KKAT+RSSKAGLQFPVGRIARFLK GKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGDD 135
           KTG+SK S  DD
Sbjct: 121 KTGASKPSAEDD 132

[Close]

BLAST of MC10g0973 vs. TAIR 10
Match: AT5G54640.1 (Histone superfamily protein )

HSP 1 Score: 232.6 bits (592), Expect = 1.8e-61
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSG +KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSK 129
           K G+SK
Sbjct: 121 KAGASK 126

[Close]

BLAST of MC10g0973 vs. TAIR 10
Match: AT4G27230.1 (histone H2A 2 )

HSP 1 Score: 232.3 bits (591), Expect = 2.4e-61
Identity = 123/131 (93.89%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGK LGSGA+KK+TSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGD 134
           K GSSK +  D
Sbjct: 121 KAGSSKPTEED 131

[Close]

BLAST of MC10g0973 vs. TAIR 10
Match: AT4G27230.2 (histone H2A 2 )

HSP 1 Score: 232.3 bits (591), Expect = 2.4e-61
Identity = 123/131 (93.89%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGK LGSGA+KK+TSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 123 KTGSSKASGGD 134
           K GSSK +  D
Sbjct: 121 KAGSSKPTEED 131

[Close]

BLAST of MC10g0973 vs. TAIR 10
Match: AT3G20670.1 (histone H2A 13 )

HSP 1 Score: 228.4 bits (581), Expect = 3.4e-60
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 3   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 62
           MAGRGKTLGSG +KK+TSRSSKAGLQFPVGRIARFLK GKYA RVGAGAPVYLAAVLEYL
Sbjct: 1   MAGRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYL 60

Query: 63  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 122
           AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIH+LLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPK 120

Query: 123 KTGSSKASGGDD 135
           K G+SK S  +D
Sbjct: 121 KAGASKPSADED 132

The following BLAST results are available for this feature:

BLAST of MC10g0973 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C681	1.8e-61	93.94	Probable histone H2A.1 OS=Arabidopsis thaliana OX=3702 GN=At1g51060 PE=1 SV=1	[more]
Q9LD28	2.6e-60	96.83	Histone H2A.6 OS=Arabidopsis thaliana OX=3702 GN=RAT5 PE=1 SV=1	[more]
O81826	3.4e-60	93.89	Probable histone H2A.3 OS=Arabidopsis thaliana OX=3702 GN=At4g27230 PE=1 SV=1	[more]
A2YVE5	2.2e-59	91.79	Probable histone H2A.3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028288 PE=3...	[more]
Q84NJ4	2.2e-59	91.79	Probable histone H2A.3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0427700 ...	[more]

BLAST of MC10g0973 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142823.1	8.47e-85	100.00	probable histone H2A.1 [Momordica charantia]	[more]
KAB1215310.1	2.33e-82	98.50	putative histone H2A.1 [Morella rubra]	[more]
XP_022929379.1	2.33e-82	98.50	histone H2A.6 [Cucurbita moschata] >XP_022985282.1 histone H2A.6 [Cucurbita maxi...	[more]
XP_039026996.1	4.55e-82	97.74	histone H2A.6 [Hibiscus syriacus] >KAE8680192.1 Protein H2A.7 [Hibiscus syriacus...	[more]
XP_039041255.1	6.47e-82	97.74	histone H2A.6-like [Hibiscus syriacus] >KAE8667030.1 Protein H2A.7 [Hibiscus syr...	[more]

BLAST of MC10g0973 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CP89	4.10e-85	100.00	Histone H2A OS=Momordica charantia OX=3673 GN=LOC111012850 PE=3 SV=1	[more]
A0A6A1VXK6	1.13e-82	98.50	Histone H2A OS=Morella rubra OX=262757 GN=CJ030_MR4G018386 PE=3 SV=1	[more]
A0A6J1J4G3	1.13e-82	98.50	Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111483322 PE=3 SV=1	[more]
A0A6J1ENK4	1.13e-82	98.50	Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111435971 PE=3 SV=1	[more]
A0A6A2XWP3	2.20e-82	97.74	Histone H2A OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111392pilonHSYRG00427 P...	[more]

BLAST of MC10g0973 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51060.1	1.3e-62	93.94	histone H2A 10	[more]
AT5G54640.1	1.8e-61	96.83	Histone superfamily protein	[more]
AT4G27230.1	2.4e-61	93.89	histone H2A 2	[more]
AT4G27230.2	2.4e-61	93.89	histone H2A 2	[more]
AT3G20670.1	3.4e-60	90.91	histone H2A 13	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 103..121 score: 66.52 coord: 17..39 score: 72.51 coord: 61..74 score: 89.46 coord: 75..89 score: 78.86 coord: 46..61 score: 90.36
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 6..126 e-value: 2.8E-77 score: 272.7
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 11..123 e-value: 2.96536E-68 score: 199.484
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 15..92 e-value: 2.0E-14 score: 54.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 3..131 e-value: 4.3E-65 score: 219.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 11..130
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 95..128 e-value: 6.1E-19 score: 67.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 4..134
None	No IPR available	PANTHER	PTHR23430:SF286	HISTONE H2A.6	coord: 4..134
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 25..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0973.1	MC10g0973.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity