MC10g0964 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0964
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 8483739 .. 8483894 (-)
RNA-Seq ExpressionMC10g0964
SyntenyMC10g0964
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTTGAGGAAGGGAAGACCAATGAAGCGATCACAGAATGTTAGGAAAACGAAAGCCATGGCAAAGGCCATATGTAAGAGCGAGCAGTCAGCCGAGAAAATAATGAAAAATCAGAGCAAAACTACCAGAATACAATCTGCAAAAACGTTGTACGAA

mRNA sequence

AAGTTGAGGAAGGGAAGACCAATGAAGCGATCACAGAATGTTAGGAAAACGAAAGCCATGGCAAAGGCCATATGTAAGAGCGAGCAGTCAGCCGAGAAAATAATGAAAAATCAGAGCAAAACTACCAGAATACAATCTGCAAAAACGTTGTACGAA

Coding sequence (CDS)

AAGTTGAGGAAGGGAAGACCAATGAAGCGATCACAGAATGTTAGGAAAACGAAAGCCATGGCAAAGGCCATATGTAAGAGCGAGCAGTCAGCCGAGAAAATAATGAAAAATCAGAGCAAAACTACCAGAATACAATCTGCAAAAACGTTGTACGAA

Protein sequence

KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
Homology
BLAST of MC10g0964 vs. NCBI nr
Match: XP_022142748.1 (uncharacterized protein LOC111012789 [Momordica charantia])

HSP 1 Score: 89.4 bits (220), Expect = 3.05e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL 50
          KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL
Sbjct: 33 KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL 82

BLAST of MC10g0964 vs. NCBI nr
Match: XP_008452291.1 (PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo])

HSP 1 Score: 82.8 bits (203), Expect = 5.96e-19
Identity = 46/52 (88.46%), Postives = 50/52 (96.15%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 52
          KL+KGRPMKRS+NVRKTKA+AKAI KSEQS EKI+KNQSKTTRIQSAKTLYE
Sbjct: 48 KLKKGRPMKRSKNVRKTKAIAKAISKSEQSMEKILKNQSKTTRIQSAKTLYE 99

BLAST of MC10g0964 vs. NCBI nr
Match: XP_038903593.1 (uncharacterized protein LOC120090147 [Benincasa hispida])

HSP 1 Score: 80.9 bits (198), Expect = 3.44e-18
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 52
          KL+KGRPMKRS+NVRKTKAMAKAI KSEQS EKI+KNQSKT RIQSAK LYE
Sbjct: 48 KLKKGRPMKRSKNVRKTKAMAKAISKSEQSTEKILKNQSKTARIQSAKALYE 99

BLAST of MC10g0964 vs. NCBI nr
Match: XP_004149295.1 (uncharacterized protein LOC101207037 [Cucumis sativus] >KAE8650169.1 hypothetical protein Csa_011173 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 9.58e-18
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 52
          KL+KGRPMKR++NVRKTKA+AKAI KSEQS EKI+KN SKTTRIQSAKTLYE
Sbjct: 47 KLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE 98

BLAST of MC10g0964 vs. NCBI nr
Match: XP_022985277.1 (uncharacterized protein LOC111483316 [Cucurbita maxima])

HSP 1 Score: 78.6 bits (192), Expect = 2.74e-17
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 52
          KL+KGRPMKRS+NVRKT A AKAI K+EQSAEKI+KNQSKTTRI SAKTLYE
Sbjct: 47 KLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE 98

BLAST of MC10g0964 vs. ExPASy TrEMBL
Match: A0A6J1CP23 (uncharacterized protein LOC111012789 OS=Momordica charantia OX=3673 GN=LOC111012789 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.47e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL 50
          KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL
Sbjct: 33 KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL 82

BLAST of MC10g0964 vs. ExPASy TrEMBL
Match: A0A1S3BUB2 (uncharacterized protein LOC103493362 OS=Cucumis melo OX=3656 GN=LOC103493362 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.89e-19
Identity = 46/52 (88.46%), Postives = 50/52 (96.15%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 52
          KL+KGRPMKRS+NVRKTKA+AKAI KSEQS EKI+KNQSKTTRIQSAKTLYE
Sbjct: 48 KLKKGRPMKRSKNVRKTKAIAKAISKSEQSMEKILKNQSKTTRIQSAKTLYE 99

BLAST of MC10g0964 vs. ExPASy TrEMBL
Match: A0A0A0L355 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099690 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.20e-18
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 52
          KL+KGRPMKR++NVRKTKA+AKAI KSEQS EKI+KN SKTTRIQSAKTLYE
Sbjct: 19 KLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE 70

BLAST of MC10g0964 vs. ExPASy TrEMBL
Match: A0A6J1J4F8 (uncharacterized protein LOC111483316 OS=Cucurbita maxima OX=3661 GN=LOC111483316 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.33e-17
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 52
          KL+KGRPMKRS+NVRKT A AKAI K+EQSAEKI+KNQSKTTRI SAKTLYE
Sbjct: 47 KLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE 98

BLAST of MC10g0964 vs. ExPASy TrEMBL
Match: A0A6J1EMH0 (uncharacterized protein LOC111435867 OS=Cucurbita moschata OX=3662 GN=LOC111435867 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.36e-17
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0

Query: 1  KLRKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 52
          KL+KGRPMKRS+NVRKT A AKAI K+EQSAEKI+KNQSKTTRI SAKTLYE
Sbjct: 48 KLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE 99

BLAST of MC10g0964 vs. TAIR 10
Match: AT4G27380.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 40.8 bits (94), Expect = 3.9e-04
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0

Query: 8   MKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE 53
           MKR++N RK KA+AKAI  SE+   K  K+++KT R  SAK LYE
Sbjct: 112 MKRTKNARKMKAVAKAIALSEKYEAKATKDKTKTLRTLSAKKLYE 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022142748.13.05e-21100.00uncharacterized protein LOC111012789 [Momordica charantia][more]
XP_008452291.15.96e-1988.46PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo][more]
XP_038903593.13.44e-1886.54uncharacterized protein LOC120090147 [Benincasa hispida][more]
XP_004149295.19.58e-1884.62uncharacterized protein LOC101207037 [Cucumis sativus] >KAE8650169.1 hypothetica... [more]
XP_022985277.12.74e-1784.62uncharacterized protein LOC111483316 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1CP231.47e-21100.00uncharacterized protein LOC111012789 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A1S3BUB22.89e-1988.46uncharacterized protein LOC103493362 OS=Cucumis melo OX=3656 GN=LOC103493362 PE=... [more]
A0A0A0L3552.20e-1884.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099690 PE=4 SV=1[more]
A0A6J1J4F81.33e-1784.62uncharacterized protein LOC111483316 OS=Cucurbita maxima OX=3661 GN=LOC111483316... [more]
A0A6J1EMH01.36e-1784.62uncharacterized protein LOC111435867 OS=Cucurbita moschata OX=3662 GN=LOC1114358... [more]
Match NameE-valueIdentityDescription
AT4G27380.13.9e-0455.56unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..52
NoneNo IPR availablePANTHERPTHR36385OS07G0562900 PROTEINcoord: 2..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0964.1MC10g0964.1mRNA