MC10g0383 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0383
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCaspase-6 protein
LocationMC10: 3051284 .. 3051436 (-)
RNA-Seq ExpressionMC10g0383
SyntenyMC10g0383
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCAGGAATTTGGGAGAACTGGGATGTACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACCTGCCTGACATCCCACCTCTGTGTTAGCGCACGGGCCTTTTGCGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGC

mRNA sequence

TCCAGGAATTTGGGAGAACTGGGATGTACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACCTGCCTGACATCCCACCTCTGTGTTAGCGCACGGGCCTTTTGCGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGC

Coding sequence (CDS)

TCCAGGAATTTGGGAGAACTGGGATGTACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACCTGCCTGACATCCCACCTCTGTGTTAGCGCACGGGCCTTTTGCGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGC

Protein sequence

SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Homology
BLAST of MC10g0383 vs. NCBI nr
Match: XP_022149347.1 (uncharacterized protein LOC111017781 isoform X1 [Momordica charantia] >XP_022149348.1 uncharacterized protein LOC111017781 isoform X1 [Momordica charantia])

HSP 1 Score: 114 bits (284), Expect = 2.77e-31
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Sbjct: 51  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 101

BLAST of MC10g0383 vs. NCBI nr
Match: XP_038882967.1 (uncharacterized protein LOC120074027 isoform X1 [Benincasa hispida])

HSP 1 Score: 111 bits (278), Expect = 2.34e-30
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SRNLGELGCTQSLLPMH IMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Sbjct: 52  SRNLGELGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 102

BLAST of MC10g0383 vs. NCBI nr
Match: XP_022922830.1 (uncharacterized protein LOC111430696 isoform X1 [Cucurbita moschata])

HSP 1 Score: 111 bits (278), Expect = 4.69e-30
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SRNLGELGCTQSLLPMH IMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Sbjct: 76  SRNLGELGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 126

BLAST of MC10g0383 vs. NCBI nr
Match: XP_022984255.1 (uncharacterized protein LOC111482625 isoform X1 [Cucurbita maxima])

HSP 1 Score: 110 bits (274), Expect = 9.52e-30
Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SRNLGELGCTQSLLPMH IMGATCLTSHLCV ARAFCELSHGTFCRTCQDR
Sbjct: 52  SRNLGELGCTQSLLPMHSIMGATCLTSHLCVGARAFCELSHGTFCRTCQDR 102

BLAST of MC10g0383 vs. NCBI nr
Match: XP_023551739.1 (uncharacterized protein LOC111809622 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104 bits (260), Expect = 1.30e-27
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SR LGELGCTQSLLPMH IMGATC TSHLCVSARAFCELSHGTFC TCQDR
Sbjct: 52  SRKLGELGCTQSLLPMHSIMGATCPTSHLCVSARAFCELSHGTFCHTCQDR 102

BLAST of MC10g0383 vs. ExPASy TrEMBL
Match: A0A6J1D7P5 (uncharacterized protein LOC111017781 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017781 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 1.34e-31
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Sbjct: 51  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 101

BLAST of MC10g0383 vs. ExPASy TrEMBL
Match: A0A6J1E9X4 (uncharacterized protein LOC111430696 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430696 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 2.27e-30
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SRNLGELGCTQSLLPMH IMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Sbjct: 76  SRNLGELGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 126

BLAST of MC10g0383 vs. ExPASy TrEMBL
Match: A0A6J1J861 (uncharacterized protein LOC111482625 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482625 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 4.61e-30
Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SRNLGELGCTQSLLPMH IMGATCLTSHLCV ARAFCELSHGTFCRTCQDR
Sbjct: 52  SRNLGELGCTQSLLPMHSIMGATCLTSHLCVGARAFCELSHGTFCRTCQDR 102

BLAST of MC10g0383 vs. ExPASy TrEMBL
Match: A0A6J1FMT0 (uncharacterized protein LOC111446884 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446884 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 2.04e-26
Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 51
           SRNLGELGCTQSLL MH I+GATCLTSHLCVS RAFCELSHGTFCRTCQDR
Sbjct: 52  SRNLGELGCTQSLLSMH-IVGATCLTSHLCVSVRAFCELSHGTFCRTCQDR 101

BLAST of MC10g0383 vs. ExPASy TrEMBL
Match: A0A6J1D5H0 (uncharacterized protein LOC111017781 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111017781 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.46e-24
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0

Query: 1  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT 43
          SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT
Sbjct: 51 SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT 93

BLAST of MC10g0383 vs. TAIR 10
Match: AT2G15000.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 8.2e-15
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 52
           SRNLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+GTF RTCQDR
Sbjct: 51  SRNLGALGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGTFQRTCQDR 101

BLAST of MC10g0383 vs. TAIR 10
Match: AT2G15000.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 8.2e-15
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0

Query: 1   SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 52
           SRNLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+GTF RTCQDR
Sbjct: 51  SRNLGALGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGTFQRTCQDR 101

BLAST of MC10g0383 vs. TAIR 10
Match: AT4G34265.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 9.4e-11
Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 0

Query: 2  RNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT 44
          RNLGELGCT+S LP++ ++ A  LTSHL V+ RAFCELS+GT
Sbjct: 49 RNLGELGCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNGT 90

BLAST of MC10g0383 vs. TAIR 10
Match: AT2G15000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 1.6e-10
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 1  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT 44
          SRNLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+GT
Sbjct: 51 SRNLGALGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93

BLAST of MC10g0383 vs. TAIR 10
Match: AT4G34265.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 3.6e-10
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0

Query: 2  RNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHG 43
          RNLGELGCT+S LP++ ++ A  LTSHL V+ RAFCELS+G
Sbjct: 49 RNLGELGCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNG 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022149347.12.77e-31100.00uncharacterized protein LOC111017781 isoform X1 [Momordica charantia] >XP_022149... [more]
XP_038882967.12.34e-3098.04uncharacterized protein LOC120074027 isoform X1 [Benincasa hispida][more]
XP_022922830.14.69e-3098.04uncharacterized protein LOC111430696 isoform X1 [Cucurbita moschata][more]
XP_022984255.19.52e-3096.08uncharacterized protein LOC111482625 isoform X1 [Cucurbita maxima][more]
XP_023551739.11.30e-2792.16uncharacterized protein LOC111809622 isoform X2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1D7P51.34e-31100.00uncharacterized protein LOC111017781 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1E9X42.27e-3098.04uncharacterized protein LOC111430696 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J8614.61e-3096.08uncharacterized protein LOC111482625 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FMT02.04e-2692.16uncharacterized protein LOC111446884 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1D5H04.46e-24100.00uncharacterized protein LOC111017781 isoform X3 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
AT2G15000.48.2e-1568.63unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.58.2e-1568.63unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G34265.29.4e-1166.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.11.6e-1065.12unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G34265.13.6e-1065.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 2..50
NoneNo IPR availablePANTHERPTHR33156:SF26OS12G0592200 PROTEINcoord: 2..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0383.1MC10g0383.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane