MC09g1871 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1871
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	MC09: 23612786 .. 23614925 (+)
RNA-Seq Expression	MC09g1871
Synteny	MC09g1871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGTTACACTAAATGGTATGCTCTTTAAAAAGAATTACATCGCCATCTTTAAAAATTAAGGTGCGATTCGTTAAGATAAAATAATAAATTATTCTAATTAGATATTAACGATGTGAACTCACTAGTTTAGAATCTAGAATTATAGTGGGTTTTATAATACCGTACTCCCCAAAATTTGACAGATTATTGAAGAAACCATAGAGAGAGAGCCACGTGGCGGAAAATCTGAATCTGGATACTGGTTGGAGACGATATTTAGGGATATGACTGGCACGGACTTTAAACGAGAGCCACAGCTTGAGATTATTCCAGGTAAGCAGAGACGAGTCAAGGTGGACGTGGCGGATATCAGATTCTCTAGGCCACGTGGCAGTGAAGCAGCCAATTGCATATTCCCTCTCCTATCCATTCAGATAAGCCCCTGCGTACATTAACAAACACAGATTCATTCTTCAATCCAAATCCACACCAATTTTACCATTTGGCAGAGGCAAGTGATCAGAGATCTCACCCAAAATGGCTTCGGCTTGTGCTTCCTCCGCCATTGCCGCCGTCGCAATCTCTTCATCCAGGCAAGTTTTATTTATCTTAATTTCCCATATTACTAATTAACGGTTCAACCTTAATTACGAGCATAATTTTGTTGCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTGTAATTTCGTAACGGGGAAGAAGCTGAGGCTGAGAAAGTACACGGCAGCTGCCGTTGCTCCTCGGTCGGCTACGGTGTGCGCCGCTGCCGACCCCAACAGACCTCTCTGGTTCCCCGGCAGCACCCCTCCTCCATGGCTCGATGGCAGCCTCCCCGGTGACTTTGGCTTCGATCCTCTTGGTCTTTGTAAGTATTCTTTAGATATCTAATATATATATATATATGAATTAAATTTATCAAGTTATCTATTTAAGTTTATAGGTTGAGGGTGGTTTATACATTTACTGGAATTTAGTTATAATGGATTACAATTGAATATAAATATGAGATAAAAGGATAAAATTAAATTACAATTTGAACCCATTTCGTATTCGATATTTTGCTACATCACTGACTTAGCATCGAATAATGGGTCAAGAAATACTTAAATCTAAGTTTAGAAATTAGCACAAAATATACAAAAGGGTAAGTTTAGGATTTTGTTTAGAAAAGTGATAAGTTCTCACGGAGGTAAAAATGAAAATGTACTGCCAGCTTCTGATCCGGAGAGCCTGAGATGGAACCAGCAGGCGGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTCTTGACGAAGATCGGAATTTTGAACACTCCGTCGTGGTACTCGGCCGGAGAATTGGAATACTTCACCGACACCACCACGCTCTTCGTGGTGGAACTCATTTTCATCGGTTGGGCCGAGGGCAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTGACCGGAACCGACGTCGGGTACCCGGGCGGACTCTGGTTCGACCCGCTCGGATGGGGCAGCGGTTCCCCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGGTTGGCGATGTTGGCGGTCATGGGCGCGTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTTTTTGCCCACCTCGCCGACCCCGGCCACGCCACCGTCTTCGCCGTGAGTTCAAAATTCACATCTTATAAATATTTTTAAATTAAAAACAGGTGGTCCATTATTAATTTGTTCTTTTTTGTTACAGGCTTTCACACCCAAGTGAAGATGGTGAAGGAGGAGAAATTGAGGAGCATAGGAGACGTAGCGGTGTGTTTGTGACTGAGGGAAAAAAAAAGTCTGTATTAATCAGAACTTGAAATCTTAGTGTTTATGTCTTCTGTGTATGATGCAAATTATCAATTTAATGTACAAAATGAGAACATAAATCAAGGAAGTTTAGATATGCCTTTGCATTCTACAAGGGAAACTTCAAAATGCCCATTTACTCTCGAAAATTGAAATGGTTAAAAATAATGTTTCGCCCACTAAAAATTATTAGGAACAGCGCCATAATACGACTACGTTTTATAAAT

mRNA sequence

AAAAAGTTACACTAAATGGTATGCTCTTTAAAAAGAATTACATCGCCATCTTTAAAAATTAAGGTGCGATTCGTTAAGATAAAATAATAAATTATTCTAATTAGATATTAACGATGTGAACTCACTAGTTTAGAATCTAGAATTATAGTGGGTTTTATAATACCGTACTCCCCAAAATTTGACAGATTATTGAAGAAACCATAGAGAGAGAGCCACGTGGCGGAAAATCTGAATCTGGATACTGGTTGGAGACGATATTTAGGGATATGACTGGCACGGACTTTAAACGAGAGCCACAGCTTGAGATTATTCCAGGTAAGCAGAGACGAGTCAAGGTGGACGTGGCGGATATCAGATTCTCTAGGCCACGTGGCAGTGAAGCAGCCAATTGCATATTCCCTCTCCTATCCATTCAGATAAGCCCCTGCGTACATTAACAAACACAGATTCATTCTTCAATCCAAATCCACACCAATTTTACCATTTGGCAGAGGCAAGTGATCAGAGATCTCACCCAAAATGGCTTCGGCTTGTGCTTCCTCCGCCATTGCCGCCGTCGCAATCTCTTCATCCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTGTAATTTCGTAACGGGGAAGAAGCTGAGGCTGAGAAAGTACACGGCAGCTGCCGTTGCTCCTCGGTCGGCTACGGTGTGCGCCGCTGCCGACCCCAACAGACCTCTCTGGTTCCCCGGCAGCACCCCTCCTCCATGGCTCGATGGCAGCCTCCCCGGTGACTTTGGCTTCGATCCTCTTGGTCTTTCTTCTGATCCGGAGAGCCTGAGATGGAACCAGCAGGCGGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTCTTGACGAAGATCGGAATTTTGAACACTCCGTCGTGGTACTCGGCCGGAGAATTGGAATACTTCACCGACACCACCACGCTCTTCGTGGTGGAACTCATTTTCATCGGTTGGGCCGAGGGCAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTGACCGGAACCGACGTCGGGTACCCGGGCGGACTCTGGTTCGACCCGCTCGGATGGGGCAGCGGTTCCCCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGGTTGGCGATGTTGGCGGTCATGGGCGCGTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTTTTTGCCCACCTCGCCGACCCCGGCCACGCCACCGTCTTCGCCGCTTTCACACCCAAGTGAAGATGGTGAAGGAGGAGAAATTGAGGAGCATAGGAGACGTAGCGGTGTGTTTGTGACTGAGGGAAAAAAAAAGTCTGTATTAATCAGAACTTGAAATCTTAGTGTTTATGTCTTCTGTGTATGATGCAAATTATCAATTTAATGTACAAAATGAGAACATAAATCAAGGAAGTTTAGATATGCCTTTGCATTCTACAAGGGAAACTTCAAAATGCCCATTTACTCTCGAAAATTGAAATGGTTAAAAATAATGTTTCGCCCACTAAAAATTATTAGGAACAGCGCCATAATACGACTACGTTTTATAAAT

Coding sequence (CDS)

ATGGCTTCGGCTTGTGCTTCCTCCGCCATTGCCGCCGTCGCAATCTCTTCATCCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTGTAATTTCGTAACGGGGAAGAAGCTGAGGCTGAGAAAGTACACGGCAGCTGCCGTTGCTCCTCGGTCGGCTACGGTGTGCGCCGCTGCCGACCCCAACAGACCTCTCTGGTTCCCCGGCAGCACCCCTCCTCCATGGCTCGATGGCAGCCTCCCCGGTGACTTTGGCTTCGATCCTCTTGGTCTTTCTTCTGATCCGGAGAGCCTGAGATGGAACCAGCAGGCGGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTCTTGACGAAGATCGGAATTTTGAACACTCCGTCGTGGTACTCGGCCGGAGAATTGGAATACTTCACCGACACCACCACGCTCTTCGTGGTGGAACTCATTTTCATCGGTTGGGCCGAGGGCAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTGACCGGAACCGACGTCGGGTACCCGGGCGGACTCTGGTTCGACCCGCTCGGATGGGGCAGCGGTTCCCCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGGTTGGCGATGTTGGCGGTCATGGGCGCGTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTTTTTGCCCACCTCGCCGACCCCGGCCACGCCACCGTCTTCGCCGCTTTCACACCCAAGTGA

Protein sequence

MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

Homology

[Close]

BLAST of MC09g1871 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.1e-136
Identity = 228/270 (84.44%), Postives = 245/270 (90.74%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGC---PKACNFVTGKKLRLRKYTAAAVAPRSATVCAA 60
           MASACASS IAAVA SS SS++NG        +F+ G++LR+ KY+    A  + TVC A
Sbjct: 1   MASACASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVA 60

Query: 61  ADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAG 120
           ADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRWNQQAELVHCRWAMLGAAG
Sbjct: 61  ADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 120

Query: 121 IFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNT 180
           IFIPE LTKIGILNTPSWY+AGE EYFTDTTTLF+VEL+ IGWAEGRRWADI+KPGCVNT
Sbjct: 121 IFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNT 180

Query: 181 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH 240
           DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQH
Sbjct: 181 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH 240

Query: 241 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 268
           IYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Sbjct: 241 IYTGTGPIDNLFAHLADPGHATIFAAFSPK 270

[Close]

BLAST of MC09g1871 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 4.9e-132
Identity = 224/270 (82.96%), Postives = 239/270 (88.52%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGC---PKACNFVTGKKLRLRKYTAAAVAPRSATVCAA 60
           MASACASS IAAVA SS SSQKNG        +F+ GK+LR+ K+ A   +   A    A
Sbjct: 1   MASACASSTIAAVAFSSPSSQKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVA 60

Query: 61  ADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAG 120
           ADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPESL+WN QAELVH RWAMLGAAG
Sbjct: 61  ADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120

Query: 121 IFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNT 180
           IFIPEFLTKIG+LNTPSWY+AGE EYFTDTTTLFV+EL+ IGWAEGRRWADI+KPGCVNT
Sbjct: 121 IFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNT 180

Query: 181 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH 240
           DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQH
Sbjct: 181 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH 240

Query: 241 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 268
           IYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Sbjct: 241 IYTGTGPIDNLFAHLADPGHATIFAAFSPK 270

[Close]

BLAST of MC09g1871 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.2e-125
Identity = 218/268 (81.34%), Postives = 235/268 (87.69%), Query Frame = 0


Query: 2   ASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRL-RKYTAAAVAPRSATVCA-AAD 61
           +S CASSAIAA++  S             F+ GKKLRL +K T  AV+   A+V A AAD
Sbjct: 3   SSLCASSAIAAISSPS-------------FLGGKKLRLKKKLTVPAVSRPDASVRAVAAD 62

Query: 62  PNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIF 121
           P+RP+WFPGSTPP WLDGSLPGDFGFDPLGLSSDP+SL+WN QAE+VHCRWAMLGAAGIF
Sbjct: 63  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 122

Query: 122 IPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDP 181
           IPEFLTKIGILNTPSWY+AGE EYFTD TTLFVVELI IGWAEGRRWADI+KPG VNTDP
Sbjct: 123 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 182

Query: 182 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIY 241
           +FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIY
Sbjct: 183 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 242

Query: 242 TGTGPIDNLFAHLADPGHATVFAAFTPK 268
           TGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAFTPK 257

[Close]

BLAST of MC09g1871 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.5e-83
Identity = 148/268 (55.22%), Postives = 183/268 (68.28%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPK---ACNFVTGKKLRLRKYTAAAVAPRSATVCAA 60
           MA A AS+  + + +S+S  Q     +   A    TG +L   +          ++VC  
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEP 60

Query: 61  ADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAG 120
             P+RPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++L+W  QAEL+H RWAML   G
Sbjct: 61  LPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 120

Query: 121 IFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNT 180
           I IPE L ++G +   SWY AG  EYF D+TTLFV +++ +GWAEGRRWAD++KPG V+ 
Sbjct: 121 IIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDI 180

Query: 181 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH 240
           +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAMLA +G  FQ 
Sbjct: 181 EPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQA 240

Query: 241 IYTGTGPIDNLFAHLADPGHATVFAAFT 266
            YT   PI+NL AHLADPGH  VF+AFT
Sbjct: 241 TYTSQDPIENLMAHLADPGHCNVFSAFT 268

[Close]

BLAST of MC09g1871 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-59
Identity = 119/256 (46.48%), Postives = 154/256 (60.16%), Query Frame = 0


Query: 10  IAAVAISSSSSQKNGCPKACNFVTGKKLRL-RKYTAAAVAPRSATVCAAADPNRPLWFPG 69
           +A V   +S+S    C     F+TG   RL R  +  ++   + T     +  +  W PG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 70  STPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIG 129
              P +L GSL GD GFDPLGL+ DPE+L+W  QAELV+ RWAMLG AG+ +PE  TKIG
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 130 ILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTG 189
           I+N P WY AG+ +YF  ++TLFV+E I   + E RRW DI  PG VN DPIF    L  
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 190 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 249
            +VGYPGG+ F+PL +        +E + KE+ NGRLAMLA +G   QH  TG GP +NL
Sbjct: 181 GEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENL 240

Query: 250 FAHLADPGHATVFAAF 265
             HL+DP H T+   F
Sbjct: 241 LQHLSDPWHNTIVQTF 250

[Close]

BLAST of MC09g1871 vs. NCBI nr
Match: XP_022151778.1 (chlorophyll a-b binding protein 7, chloroplastic [Momordica charantia])

HSP 1 Score: 559 bits (1440), Expect = 3.42e-201
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. NCBI nr
Match: XP_023541134.1 (chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548 bits (1413), Expect = 4.48e-197
Identity = 262/267 (98.13%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAIA VAISSSSSQKNGCPKA NFVTGKKLRLRKYT AAVAPRSA VCAAADP
Sbjct: 1   MASACASSAIATVAISSSSSQKNGCPKASNFVTGKKLRLRKYTTAAVAPRSAPVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. NCBI nr
Match: XP_022966812.1 (chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 547 bits (1409), Expect = 1.83e-196
Identity = 261/267 (97.75%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAIA VAISSSSSQKNGCPKA NFVTGKKLRLRKYT  AVAPRSA VCAAADP
Sbjct: 1   MASACASSAIATVAISSSSSQKNGCPKASNFVTGKKLRLRKYTTVAVAPRSAPVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. NCBI nr
Match: XP_022945038.1 (chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita moschata] >KAG6573588.1 Chlorophyll a-b binding protein 7, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 545 bits (1405), Expect = 7.44e-196
Identity = 260/267 (97.38%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAI AVAISSSSSQKNGCPKA NFVTGKKLRLRKYT   VAPRSA VCAAADP
Sbjct: 1   MASACASSAITAVAISSSSSQKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. NCBI nr
Match: XP_022957420.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata] >XP_022998486.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita maxima] >XP_023515906.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 545 bits (1405), Expect = 7.44e-196
Identity = 259/267 (97.00%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAIAAVAISSSSSQKNGCPK  NF+TGK+LRLRKYTAAAVAPRSA VCAAADP
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKVSNFLTGKRLRLRKYTAAAVAPRSAPVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           +RPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWY+AGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. ExPASy TrEMBL
Match: A0A6J1DD44 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019680 PE=3 SV=1)

HSP 1 Score: 559 bits (1440), Expect = 1.66e-201
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. ExPASy TrEMBL
Match: A0A6J1HNZ1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466406 PE=3 SV=1)

HSP 1 Score: 547 bits (1409), Expect = 8.84e-197
Identity = 261/267 (97.75%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAIA VAISSSSSQKNGCPKA NFVTGKKLRLRKYT  AVAPRSA VCAAADP
Sbjct: 1   MASACASSAIATVAISSSSSQKNGCPKASNFVTGKKLRLRKYTTVAVAPRSAPVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. ExPASy TrEMBL
Match: A0A6J1KAB5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493102 PE=3 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 3.60e-196
Identity = 259/267 (97.00%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAIAAVAISSSSSQKNGCPK  NF+TGK+LRLRKYTAAAVAPRSA VCAAADP
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKVSNFLTGKRLRLRKYTAAAVAPRSAPVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           +RPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWY+AGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. ExPASy TrEMBL
Match: A0A6J1H0H5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458830 PE=3 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 3.60e-196
Identity = 259/267 (97.00%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAIAAVAISSSSSQKNGCPK  NF+TGK+LRLRKYTAAAVAPRSA VCAAADP
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKVSNFLTGKRLRLRKYTAAAVAPRSAPVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           +RPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWY+AGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. ExPASy TrEMBL
Match: A0A6J1FZP5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449400 PE=3 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 3.60e-196
Identity = 260/267 (97.38%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADP 60
           MASACASSAI AVAISSSSSQKNGCPKA NFVTGKKLRLRKYT   VAPRSA VCAAADP
Sbjct: 1   MASACASSAITAVAISSSSSQKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADP 60

Query: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120
           NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI
Sbjct: 61  NRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFI 120

Query: 121 PEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180
           PEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI
Sbjct: 121 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPI 180

Query: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240
           FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT
Sbjct: 181 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 240

Query: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267
           GTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 GTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]

BLAST of MC09g1871 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 450.7 bits (1158), Expect = 8.4e-127
Identity = 218/268 (81.34%), Postives = 235/268 (87.69%), Query Frame = 0


Query: 2   ASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRL-RKYTAAAVAPRSATVCA-AAD 61
           +S CASSAIAA++  S             F+ GKKLRL +K T  AV+   A+V A AAD
Sbjct: 3   SSLCASSAIAAISSPS-------------FLGGKKLRLKKKLTVPAVSRPDASVRAVAAD 62

Query: 62  PNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIF 121
           P+RP+WFPGSTPP WLDGSLPGDFGFDPLGLSSDP+SL+WN QAE+VHCRWAMLGAAGIF
Sbjct: 63  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 122

Query: 122 IPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDP 181
           IPEFLTKIGILNTPSWY+AGE EYFTD TTLFVVELI IGWAEGRRWADI+KPG VNTDP
Sbjct: 123 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 182

Query: 182 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIY 241
           +FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIY
Sbjct: 183 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 242

Query: 242 TGTGPIDNLFAHLADPGHATVFAAFTPK 268
           TGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAFTPK 257

[Close]

BLAST of MC09g1871 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 310.1 bits (793), Expect = 1.8e-84
Identity = 148/268 (55.22%), Postives = 183/268 (68.28%), Query Frame = 0


Query: 1   MASACASSAIAAVAISSSSSQKNGCPK---ACNFVTGKKLRLRKYTAAAVAPRSATVCAA 60
           MA A AS+  + + +S+S  Q     +   A    TG +L   +          ++VC  
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEP 60

Query: 61  ADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAG 120
             P+RPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++L+W  QAEL+H RWAML   G
Sbjct: 61  LPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 120

Query: 121 IFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNT 180
           I IPE L ++G +   SWY AG  EYF D+TTLFV +++ +GWAEGRRWAD++KPG V+ 
Sbjct: 121 IIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDI 180

Query: 181 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH 240
           +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAMLA +G  FQ 
Sbjct: 181 EPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQA 240

Query: 241 IYTGTGPIDNLFAHLADPGHATVFAAFT 266
            YT   PI+NL AHLADPGH  VF+AFT
Sbjct: 241 TYTSQDPIENLMAHLADPGHCNVFSAFT 268

[Close]

BLAST of MC09g1871 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 230.3 bits (586), Expect = 1.8e-60
Identity = 119/256 (46.48%), Postives = 154/256 (60.16%), Query Frame = 0


Query: 10  IAAVAISSSSSQKNGCPKACNFVTGKKLRL-RKYTAAAVAPRSATVCAAADPNRPLWFPG 69
           +A V   +S+S    C     F+TG   RL R  +  ++   + T     +  +  W PG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 70  STPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIG 129
              P +L GSL GD GFDPLGL+ DPE+L+W  QAELV+ RWAMLG AG+ +PE  TKIG
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 130 ILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTG 189
           I+N P WY AG+ +YF  ++TLFV+E I   + E RRW DI  PG VN DPIF    L  
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 190 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 249
            +VGYPGG+ F+PL +        +E + KE+ NGRLAMLA +G   QH  TG GP +NL
Sbjct: 181 GEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENL 240

Query: 250 FAHLADPGHATVFAAF 265
             HL+DP H T+   F
Sbjct: 241 LQHLSDPWHNTIVQTF 250

[Close]

BLAST of MC09g1871 vs. TAIR 10
Match: AT5G28450.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 214.9 bits (546), Expect = 7.7e-56
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 165 RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGR 224
           R  DI+KPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGR
Sbjct: 71  RAPDIIKPGSVNTDPVFPNNKLTGTDIGYPGGLWFDPLGWGSGSPTKIKELRTKEIKNGR 130

Query: 225 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 268
           LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 131 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 173

[Close]

BLAST of MC09g1871 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-52
Identity = 107/240 (44.58%), Postives = 143/240 (59.58%), Query Frame = 0


Query: 32  VTGKKLRLRKYTAAAVAPRSATVCAAAD-------PNRPLWFPGSTPPPWLDGSLPGDFG 91
           +TG  L  R+  ++ +  R ++V AA           R  W PG  PPP+LDG+L GD+G
Sbjct: 9   ITGGFLHHRRDASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYG 68

Query: 92  FDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEY- 151
           FDPLGL  DPESL+W  QAELVH R+AMLG AGI   + L   GI N P WY AG +++ 
Sbjct: 69  FDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFD 128

Query: 152 FTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFD 211
           F  T TL VV+ + +G+AE +R+ D + PG    +  F       L G + GYPGG   +
Sbjct: 129 FASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLN 188

Query: 212 PLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV 261
           PLG      +   + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL++P H T+
Sbjct: 189 PLGLAK-DVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTI 247

The following BLAST results are available for this feature:

BLAST of MC09g1871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10708	1.1e-136	84.44	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
P13869	4.9e-132	82.96	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
Q9SYW8	1.2e-125	81.34	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]
Q8LCQ4	2.5e-83	55.22	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th...	[more]
P27521	2.5e-59	46.48	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of MC09g1871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151778.1	3.42e-201	100.00	chlorophyll a-b binding protein 7, chloroplastic [Momordica charantia]	[more]
XP_023541134.1	4.48e-197	98.13	chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita pepo subsp. pep...	[more]
XP_022966812.1	1.83e-196	97.75	chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita maxima]	[more]
XP_022945038.1	7.44e-196	97.38	chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita moschata] >KAG6...	[more]
XP_022957420.1	7.44e-196	97.00	chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata] >XP_022998...	[more]

BLAST of MC09g1871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD44	1.66e-201	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1HNZ1	8.84e-197	97.75	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1KAB5	3.60e-196	97.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1H0H5	3.60e-196	97.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1FZP5	3.60e-196	97.38	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of MC09g1871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61470.1	8.4e-127	81.34	photosystem I light harvesting complex gene 2	[more]
AT1G19150.1	1.8e-84	55.22	photosystem I light harvesting complex gene 6	[more]
AT3G47470.1	1.8e-60	46.48	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT5G28450.1	7.7e-56	92.23	Chlorophyll A-B binding family protein	[more]
AT1G45474.1	2.3e-52	44.58	photosystem I light harvesting complex gene 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 72..257 e-value: 2.1E-77 score: 261.3
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 71..237 e-value: 6.6E-54 score: 182.8
None	No IPR available	PANTHER	PTHR21649:SF116	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 1..267
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 58..265
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1871.1	MC09g1871.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding