MC09g1461 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1461
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA repair REX1-B protein
Location	MC09: 20569317 .. 20572810 (+)
RNA-Seq Expression	MC09g1461
Synteny	MC09g1461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAAAGCTTCCTTAGTAGTGTTCGCTTCGCCTCGACATAGAGTTAGAAGCTTCAGGTTGAAGACTGAAGTCGAAGCGAAAAAAAAAATCATTACGAGAATGGAAGATTTTGACAATAAGCTCTCTCTGGCTGAACCCATGGAGATGGAGGAAGATCAAGAATTCGGGGCCACCGATCCCTCCAACACTCTTGGTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAGAGGTAACATTCATTTGATTTTCGTTTCAATTCTTTTTCAATGTTCTCGAAAATCAATGAAGAATTCCATAGCTTGAGTGATAAGTATGGCGTATTTCTGTCGTAGTTCTTTCATACCGCAAGATTTTGTCCTAAAGCATGTTTAAGATACATTTTCTTTCATAGTTATTCCATGAAGTTTCGAGAATTTGTGTTAGACCTAAATGAATTCAGCGGCAAAACTTCTAGGTATGGAATTCTTGGAAGTCTTTACCATTCTTTTTGATTCGCAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAAGTATCTTACCAACAACTTTGCAGTGAGATCACGACGGAGTTCAATTATTGCTCTAAACAAGTTTGTTTTACAATTTCATACCATTTCGTTGGGTCCTAGTCTTCGTTGAGCCTGTTTCCTTATGAGTTTTTCCCTTTCTGGACTCTCTTTTGTTGTAGGTCATTGACATTGAGTCAGATTTCCGGAATCCTGATCACAGCAGGCTCGAGTTAGCTGACCTGCTTAGATCTGTTCAATTACAGGAGAAGCAGAAATTGCACCTGGTATGCTACGTCCAGAAAGTCTTTAAAATGTCTTGAAATTTGTTTTTAAGCATCCTATCCTCTGCAAAGAATAAGCTTGACGAGTAAGATTCTTTTAAACTATAAACAAATGACGTGATTTCTCAGAATCCTAATTGGTCAGTTAAACTTGTGATTATAAAATTTGGTAGCATTGGTCCGTATATGCTCTGGAAAATCGTTTTGAAACCTTATTTAGTACGGATAATTTAAGTAAGATGACCATTTGGTTTACATTATGATTCAAGGACTGTTGCTGGCTACTTTTTTATAGCCAGTGGATTTTAGATTTTGTTCCAAGAATTATTTCGGTTCTGGTAGGCTGATAGAAAAGGGTTTTTTTTCCCCTCCTCCTGCAGTGATAAAGTATGTTTTTTAGTGATGATGAGCCTTCCATGGTTATTACATGTAAAATCATAAGAGTCCTATAGATTTGATCTAGACTCCTTTACTGTTTCTTATTTCTTTTAAAAATTTTGTTTTGGACTCTCTTAAATGTTTATGTACCATCGTAGTTGTTTTCATACTGCTGATTCCTTTAGCTGTGGTCCACTTTGTCTTAACAAGAACTAGATTTGTCATTTGACAGGTCATTATTTAAGATCTTTTAATTACATACCAGTTTTCCTTTAACTCTATCTTATTAGACAAACATGTTTAGGGCATAAGCAAAAACAATCTTCTATTATCCTGTTTGTCATAAGAAGAATTCAAGCCAAAATAATGTAAGTTGTAGGAGTCTTTTTGTATTTTATGAAAGCTTGATACATTTTTCAAAAAAAAAAAAAAAAAGAAGGAGAAAAAAAAGAGAAAAAAAAAGGGCAATGATGGTGAATTTTGACAATCTGAACTGCATACATGATACAACTGACTTCGTTTTATTTTGATGAATTGCACTTCTAAAAGTTAGCCCAAGAAAGGAAAATGATTCAACTACAATGTTGTCTATTACTCATCCGATGGTTATTCAGTTTATAAGAAAATACGAGAAGGAATATCATAGCTGGGGTAGCACATACATTTTCCCCTTTTTTTCTCTCCCCCTTTTTGCCTCTAAACTACTGAACTCGATGTCCTATGTTTTCAGTTACCTACACAAGGTCTTCATTAGTGATATGTAGCTTATCCTTCAATGCATGCACAGTAGTCTAATTGTAATTTTAAATGCAAAAACTCAGTACTGGAAGTCTTCTGGTCATCTTTGATTTATTTGAAGGTTGAAACTTGAGAATGCATATGAATAAGCAGACGAGGAGATAAGGCACATTACCCAGTATTTGTGTTGTGGGTGGGTTTTCTTGGACACGAATGTACTTTTCCCGGTCCGAGACCTCATTATATAAAGTTCAATAGTCGAGATCTTATCATTATCTTTCCCTAACAAGTATTCCTTTAAAGACAGCTCAAATTCAGTTACTGAAGAAGGCTGGCCGTCCATCAGAGCGTTTGGTGAGCCACGAGAATTGCAGATTCAAGACGCCTCGAGAGCACGAGTGCGTGCATGTCCATGAGATAACCGAAGCTTCTGGTACTGAGGAAGCAGAAGCAGATGCCGAATACGACAATTCTCTCAAGGAAGCAATCAAAGGCGTCCAAGATGCTGTGACCACCATAAACGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATGAGTAATCTTGTGACATATAAGATGATATCTTGCTCGCAATTCAATTGATAACAGGAACATACCTGTACAGATATACAGAATCGGTTTCGAAAAATTTTCTTCTGCGCGTTTTGCTTGATCTTTCACCTTCTTTGATGAGATTTATCAACTGAATTCTTAATTTTTAGCCTCGATTTTTGTGTGTCTACTCTAGATTGGGAAATAAAGCAGGGAGAGTGATTAGGAGAAGGTCAAGGATACTGTTTCAAGAGTGTGGTTGGAGCCTTCCAGCCTTTTTTACCTCTGCCATTTGCTCCAAACGGTAATTGGCCTATCTCTTTTATTATACCAAAATATCCTATATGGGAATTATCTCTCCTCTAATATAGGTACTAGATTATGGCATATCGTACCTCTAACATATGGACTAAATTATATAAAATCGTGCTAATCAGTTCAACTGGTCAAGATATATGTTTCCGGTTAAAAGGTTGGAAGTTCGAATTCTCTACCCCACGTATGGTTGACTAAAATTATCGTTATATACTGCTTCAATATTGAACTTTTTCATTAACTCGAATCACTGTCAGAGACTGAGGAACTGAAGTCAATGTTTCAAATTTCCTTTACGCTGCTGAAGTTCAGTGGTGGTTTGCAACTTGAAATTCAATCCGAGGGAAAATTTGATGAACTGAATTGATCCGATTGAAATTGAACCAATCTATTTGTATTTGGACCACGGGGCTATATTCCAGTTGGTGTAAGATGGTTCTGTTTGATTTTTCCTTGAAGCAGCAAATTGTCTGTTCAATTTCATATATGAGCAGGACAGCATTGAAAGAAGGAAAAAAACCAAACATTTTCCTATGGCGTAAATCAAATTTCGTTATATATTGCTATATACTCGGCTAGACTAGTGGTGTTTACAATTGATTTCCGCTCCCATAAACTCCACTGTCCATGAATTTTAATACCTAATAATTTAGTTCTTGTAGTTTATCCAATATAAC

mRNA sequence

TTTAAAAGCTTCCTTAGTAGTGTTCGCTTCGCCTCGACATAGAGTTAGAAGCTTCAGGTTGAAGACTGAAGTCGAAGCGAAAAAAAAAATCATTACGAGAATGGAAGATTTTGACAATAAGCTCTCTCTGGCTGAACCCATGGAGATGGAGGAAGATCAAGAATTCGGGGCCACCGATCCCTCCAACACTCTTGGTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAGAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAAGTATCTTACCAACAACTTTGCAGTGAGATCACGACGGAGTTCAATTATTGCTCTAAACAAGTCATTGACATTGAGTCAGATTTCCGGAATCCTGATCACAGCAGGCTCGAGTTAGCTGACCTGCTTAGATCTGTTCAATTACAGGAGAAGCAGAAATTGCACCTGACAGCTCAAATTCAGTTACTGAAGAAGGCTGGCCGTCCATCAGAGCGTTTGGTGAGCCACGAGAATTGCAGATTCAAGACGCCTCGAGAGCACGAGTGCGTGCATGTCCATGAGATAACCGAAGCTTCTGGTACTGAGGAAGCAGAAGCAGATGCCGAATACGACAATTCTCTCAAGGAAGCAATCAAAGGCGTCCAAGATGCTGTGACCACCATAAACGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATGAGTAATCTTGTGACATATAAGATGATATCTTGCTCGCAATTCAATTGATAACAGGAACATACCTGTACAGATATACAGAATCGGTTTCGAAAAATTTTCTTCTGCGCGTTTTGCTTGATCTTTCACCTTCTTTGATGAGATTTATCAACTGAATTCTTAATTTTTAGCCTCGATTTTTGTGTGTCTACTCTAGATTGGGAAATAAAGCAGGGAGAGTGATTAGGAGAAGGTCAAGGATACTGTTTCAAGAGTGTGGTTGGAGCCTTCCAGCCTTTTTTACCTCTGCCATTTGCTCCAAACGAGACTGAGGAACTGAAGTCAATGTTTCAAATTTCCTTTACGCTGCTGAAGTTCAGTGGTGGTTTGCAACTTGAAATTCAATCCGAGGGAAAATTTGATGAACTGAATTGATCCGATTGAAATTGAACCAATCTATTTGTATTTGGACCACGGGGCTATATTCCAGTTGGTGTAAGATGGTTCTGTTTGATTTTTCCTTGAAGCAGCAAATTGTCTGTTCAATTTCATATATGAGCAGGACAGCATTGAAAGAAGGAAAAAAACCAAACATTTTCCTATGGCGTAAATCAAATTTCGTTATATATTGCTATATACTCGGCTAGACTAGTGGTGTTTACAATTGATTTCCGCTCCCATAAACTCCACTGTCCATGAATTTTAATACCTAATAATTTAGTTCTTGTAGTTTATCCAATATAAC

Coding sequence (CDS)

TTAAAAGCTTCCTTAGTAGTGTTCGCTTCGCCTCGACATAGAGTTAGAAGCTTCAGGTTGAAGACTGAAGTCGAAGCGAAAAAAAAAATCATTACGAGAATGGAAGATTTTGACAATAAGCTCTCTCTGGCTGAACCCATGGAGATGGAGGAAGATCAAGAATTCGGGGCCACCGATCCCTCCAACACTCTTGGTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAGAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAAGTATCTTACCAACAACTTTGCAGTGAGATCACGACGGAGTTCAATTATTGCTCTAAACAAGTCATTGACATTGAGTCAGATTTCCGGAATCCTGATCACAGCAGGCTCGAGTTAGCTGACCTGCTTAGATCTGTTCAATTACAGGAGAAGCAGAAATTGCACCTGACAGCTCAAATTCAGTTACTGAAGAAGGCTGGCCGTCCATCAGAGCGTTTGGTGAGCCACGAGAATTGCAGATTCAAGACGCCTCGAGAGCACGAGTGCGTGCATGTCCATGAGATAACCGAAGCTTCTGGTACTGAGGAAGCAGAAGCAGATGCCGAATACGACAATTCTCTCAAGGAAGCAATCAAAGGCGTCCAAGATGCTGTGACCACCATAAACGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATGAGTAA

Protein sequence

LKASLVVFASPRHRVRSFRLKTEVEAKKKIITRMEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMTSGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEAIKGVQDAVTTINEHMEEVRYEIAALEDE

Homology

[Close]

BLAST of MC09g1461 vs. ExPASy Swiss-Prot
Match: Q17Q97 (Required for excision 1-B domain-containing protein OS=Bos taurus OX=9913 GN=REX1BD PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.0e-04
Identity = 29/97 (29.90%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 66  LLRKFLEIQQRRAEAYAKLKRGFDEYMTSGREVS---YQQLCSEITTEFNYCSKQVIDIE 125
           L+++  ++Q  RA+A+ +L+ G  +Y++SG       Y+    E+T  F   S++V+ +E
Sbjct: 42  LVQRIHQLQAERAQAFRRLEEGHRQYLSSGPPYDFPRYRSTVHEVTQVFAAASREVLAVE 101

Query: 126 SDFRNPDHSRLELADLLRSVQLQEKQKLHLTAQIQLL 160
           ++   P    L LA  +RS+Q  E+ +L   A +QL+
Sbjct: 102 AELAGPRAQPL-LASHVRSLQQLEETRLTTVALLQLM 137

[Close]

BLAST of MC09g1461 vs. NCBI nr
Match: XP_022150684.1 (uncharacterized protein LOC111018757 [Momordica charantia])

HSP 1 Score: 400 bits (1029), Expect = 6.34e-140
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT
Sbjct: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT
Sbjct: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALEDE 241
           IKGVQDAVTTINEHMEEVRYEIAALEDE
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 208

[Close]

BLAST of MC09g1461 vs. NCBI nr
Match: XP_023541138.1 (uncharacterized protein C19orf60 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335 bits (859), Expect = 5.01e-114
Identity = 177/207 (85.51%), Postives = 188/207 (90.82%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCRFKTPREHEC+HVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECLHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALED 240
           IKGVQDAVTTINEHMEEVRYEIAALED
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALED 207

[Close]

BLAST of MC09g1461 vs. NCBI nr
Match: XP_022945518.1 (uncharacterized protein C19orf60 homolog [Cucurbita moschata] >XP_022968603.1 uncharacterized protein C19orf60 homolog [Cucurbita maxima] >KAG6573912.1 Required for excision 1-B domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335 bits (858), Expect = 7.11e-114
Identity = 177/207 (85.51%), Postives = 188/207 (90.82%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALED 240
           IKGVQ+AVTTINEHMEEVRYEIAALED
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALED 207

[Close]

BLAST of MC09g1461 vs. NCBI nr
Match: KAG7012978.1 (hypothetical protein SDJN02_25732 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (854), Expect = 2.89e-113
Identity = 176/207 (85.02%), Postives = 188/207 (90.82%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCRFKTP+EHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPQEHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALED 240
           IKGVQ+AVTTINEHMEEVRYEIAALED
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALED 207

[Close]

BLAST of MC09g1461 vs. NCBI nr
Match: XP_008446706.1 (PREDICTED: uncharacterized protein LOC103489347 [Cucumis melo] >KAA0034618.1 uncharacterized protein E6C27_scaffold65G006350 [Cucumis melo var. makuwa] >TYK09169.1 uncharacterized protein E5676_scaffold475G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (852), Expect = 4.89e-113
Identity = 178/207 (85.99%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDF+ KLSL E  +MEED+    TD SNTL LLR+FLEIQQRRAEAY+KLKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDE--QMEEDR---GTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGRE+SYQQLCSEITTEF+ CSKQVIDIES+FRN DH+RLELA+LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCR   PREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALED 240
           IKGVQDAVTTIN+HMEEVRYEI ALED
Sbjct: 181 IKGVQDAVTTINDHMEEVRYEIEALED 202

[Close]

BLAST of MC09g1461 vs. ExPASy TrEMBL
Match: A0A6J1DAT6 (uncharacterized protein LOC111018757 OS=Momordica charantia OX=3673 GN=LOC111018757 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 3.07e-140
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT
Sbjct: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT
Sbjct: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALEDE 241
           IKGVQDAVTTINEHMEEVRYEIAALEDE
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 208

[Close]

BLAST of MC09g1461 vs. ExPASy TrEMBL
Match: A0A6J1HYI6 (uncharacterized protein C19orf60 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467775 PE=4 SV=1)

HSP 1 Score: 335 bits (858), Expect = 3.44e-114
Identity = 177/207 (85.51%), Postives = 188/207 (90.82%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALED 240
           IKGVQ+AVTTINEHMEEVRYEIAALED
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALED 207

[Close]

BLAST of MC09g1461 vs. ExPASy TrEMBL
Match: A0A6J1G147 (uncharacterized protein C19orf60 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449729 PE=4 SV=1)

HSP 1 Score: 335 bits (858), Expect = 3.44e-114
Identity = 177/207 (85.51%), Postives = 188/207 (90.82%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALED 240
           IKGVQ+AVTTINEHMEEVRYEIAALED
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALED 207

[Close]

BLAST of MC09g1461 vs. ExPASy TrEMBL
Match: A0A5D3CFT2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001610 PE=4 SV=1)

HSP 1 Score: 332 bits (852), Expect = 2.37e-113
Identity = 178/207 (85.99%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDF+ KLSL E  +MEED+    TD SNTL LLR+FLEIQQRRAEAY+KLKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDE--QMEEDR---GTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGRE+SYQQLCSEITTEF+ CSKQVIDIES+FRN DH+RLELA+LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCR   PREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALED 240
           IKGVQDAVTTIN+HMEEVRYEI ALED
Sbjct: 181 IKGVQDAVTTINDHMEEVRYEIEALED 202

[Close]

BLAST of MC09g1461 vs. ExPASy TrEMBL
Match: A0A1S3BGI9 (uncharacterized protein LOC103489347 OS=Cucumis melo OX=3656 GN=LOC103489347 PE=4 SV=1)

HSP 1 Score: 332 bits (852), Expect = 2.37e-113
Identity = 178/207 (85.99%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 34  MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 93
           MEDF+ KLSL E  +MEED+    TD SNTL LLR+FLEIQQRRAEAY+KLKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDE--QMEEDR---GTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 94  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 153
           SGRE+SYQQLCSEITTEF+ CSKQVIDIES+FRN DH+RLELA+LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLT 120

Query: 154 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 213
           AQIQLLKKAGRPSERLVSHENCR   PREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 214 IKGVQDAVTTINEHMEEVRYEIAALED 240
           IKGVQDAVTTIN+HMEEVRYEI ALED
Sbjct: 181 IKGVQDAVTTINDHMEEVRYEIEALED 202

[Close]

BLAST of MC09g1461 vs. TAIR 10
Match: AT5G04910.1 (unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). )

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 135/217 (62.21%), Postives = 166/217 (76.50%), Query Frame = 0


Query: 35  EDFDNKLSLAEPMEMEEDQEFGATD------------PSNTLGLLRKFLEIQQRRAEAYA 94
           EDF  K+SL + +  + + E G +              S TL LLR  LEIQQRRA+AYA
Sbjct: 4   EDFQKKVSLRDSLSGDIENECGGSGVGSTSSTVGSGVASQTLVLLRSLLEIQQRRAQAYA 63

Query: 95  KLKRGFDEYMTSGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSV 154
            LK GF EY+ SG E  YQ+LCSEITTEF+ CSKQV ++ES F NP+  R +LA LL  +
Sbjct: 64  NLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLLSDI 123

Query: 155 QLQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEA 214
           Q QEKQKLHLT  IQ+LKKAGRPSER+++HENC+FK P +HECVH+HEITEA+GTEEAEA
Sbjct: 124 QTQEKQKLHLTVTIQVLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEEAEA 183

Query: 215 DAEYDNSLKEAIKGVQDAVTTINEHMEEVRYEIAALE 240
           DAE+DN+LKEAI+GVQDAVT+INE++E++RYEI ALE
Sbjct: 184 DAEFDNALKEAIRGVQDAVTSINEYLEDIRYEIEALE 220

The following BLAST results are available for this feature:

BLAST of MC09g1461 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q17Q97	6.0e-04	29.90	Required for excision 1-B domain-containing protein OS=Bos taurus OX=9913 GN=REX...	[more]

BLAST of MC09g1461 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150684.1	6.34e-140	100.00	uncharacterized protein LOC111018757 [Momordica charantia]	[more]
XP_023541138.1	5.01e-114	85.51	uncharacterized protein C19orf60 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022945518.1	7.11e-114	85.51	uncharacterized protein C19orf60 homolog [Cucurbita moschata] >XP_022968603.1 un...	[more]
KAG7012978.1	2.89e-113	85.02	hypothetical protein SDJN02_25732 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008446706.1	4.89e-113	85.99	PREDICTED: uncharacterized protein LOC103489347 [Cucumis melo] >KAA0034618.1 unc...	[more]

BLAST of MC09g1461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAT6	3.07e-140	100.00	uncharacterized protein LOC111018757 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1HYI6	3.44e-114	85.51	uncharacterized protein C19orf60 homolog OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1G147	3.44e-114	85.51	uncharacterized protein C19orf60 homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3CFT2	2.37e-113	85.99	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BGI9	2.37e-113	85.99	uncharacterized protein LOC103489347 OS=Cucumis melo OX=3656 GN=LOC103489347 PE=...	[more]

BLAST of MC09g1461 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04910.1	1.6e-68	62.21	unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 221..241
IPR039491	Required for excision 1-B domain-containing protein	PFAM	PF14966	DNA_repr_REX1B	coord: 66..160 e-value: 5.3E-33 score: 113.5
IPR039491	Required for excision 1-B domain-containing protein	PANTHER	PTHR28309	REQUIRED FOR EXCISION 1-B DOMAIN-CONTAINING PROTEIN	coord: 60..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1461.1	MC09g1461.1	mRNA