MC09g1397 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1397
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein BTR1
Location	MC09: 20029639 .. 20035354 (-)
RNA-Seq Expression	MC09g1397
Synteny	MC09g1397

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGACAATATGGACAAGGCCACATACATTAGGTTTCTTGTATCAAATGCTGCTGCTGGTTCTGTGATTGGGAAAGGTGGCTCAACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCAAGGAATCATGAATTCTTTCCTGGAACCACTGATAGGATCATTATGGTATCTGGATCAATAAATGAAATATTGAAGGCCATGGAACTTGTTCTTGCTAAGTTGTTGAGTGAGGTAATCTCTATGCAGTTCAAGTTCACTCTAATTTTTAAATGTTGTATTATGTTTGATTGATTGACAATTTTGTTTCTGGTAGCTTCATGCTGAAGAAGGAGATGATGTTGAACCGAGAACAAAAGTGAGACTGATTGTACCCCATAGTTCTTGTGGAGCTATAATTGGGAAAGGAGGGTCCACTATAAAGTATGATGATTATTCCTCATTTCTTCTAGTACCATTTTCTTGGTTACGAATTGCTTTATAATTTACTAGCTTAAACAGTTCATTATTGTATTTAATTTTGAAGTTTTAAATTCATTTATTTATTTATGTTAGACAAGAAAAATAATAGCTAAGTGAACATTTTTTAGTGATTCCTGCAGGGTATTTTCTATCTAAATTTGTATTAAGGTGCAGTTTCGTTGCATGGGTTGTTAACAACTGCTGGCTTGTTTCTCTACGATTTTTTTCCTTCAACTATATGTGTTTATAGGGAATTGTGTAGTGTAGTTTTTTTATGGTTACAATTGCAAGTTCAGATCTAAATCCTGTTATGCTAGTTCCAGTGTACAAGTGTTTTTCTTTTTGACGGATTGTGTACAAGTTTTATTGAAAGGAAGTACTGACTCTTTTCGTAACCCATAAGTTTGACCTTCATGTCCAGGAAGAAAGTACCACTTGATATATTAGTTCTGTTTTCTATTTGAAAAGCACATAATGAATTTGTGGTTGTGATAGAATTATAATATGTTTTGTTTATTGACTACTAAATGGTGTATGTTAGAAGTCGATCATTCCTAACAGGAAGCAAGTAATGGTGTTCTAATGAAGTTGTTTAAGGATTTGGGAAATCTTGTATGTGAGTTGCATAATAAAATGGATTAGGATTACCTTGGGTAATATTGTGGTTAGGGGGTGAATGTTTAAGTAGTAGAGTCAGTATTGTGCTAGTGAGGTTTCACAATTGTATTATTAGCTAAGATTTCCCACCAAAAATGGGCAAAAAAAAAAAAAAGGAGGAAGAAAACCTTCAAGAGTGTACACAGAAATAGATGAACTCAACTTGGATGAGATTTGAGAATGGAAAAGAACTTTAGAGGATAGAAATGATTGTTGCTTCTAAGATGGTTATGAAGTGGTCTTGTCTAAGTATATATATTGATTATTGAGTGGCATTCTTTCCTTTCATAGACACATTGATTTGAAGAGTATCCATCTCCTACAAATTAAATGTGCTACAATGTTTTTCCTGCGTCACCTTCATGTCCCACAATGGTTATGGCCCTTAGCTGTGTAAAAGTCACTTTACTTCATTTTCTAGCTACAATTTAAATGACATCTTGATCAATTGGAGGGATTTTTTGTAACTCATCTTCATGGGTTCCTTCCCCATTTTGTATATATTTCATTCTACCAATGAAATATGTGTTTCTCATAAAAAAGAAAGAAAAGTCCTATGTCTGTATTTGTGTTGCTGAGGTGTTCTAGTTAGCTCTCTGGACATCATTAATATTGGTAGAGGTATGCCATGGTTAGTGCTTTAAGAGAATTTACAAAGTTTCTAAGAAAGAGTGCCATTATTTATCTAGAATACCTTCATTAATTTGGCAGTTGCTTTCGGTCCTTCCAGTGTTCTTATCAGTCTTGGACTGTTCATCTAGTCAATATCTTTTAATTTGGTATGTCTCATCAAGGCCTCTTTTCTACATTCTAGGGTAGAATTTATATTGGCGTTACCTGCTTTTCTCCATCACCTAGAGGATATGCATAAAACAATTGTAGTTCACCTCAGTCGGGAAAATGAATATGGCAGAATTGTTTGAAGAAAACTTGTCGCATCAGGTAATTGACTAAGTAGCTGAATGGGGAAAGGGGAAAGGAAGAGAAGTAAAGGACAGAGTTACCTCAGTCAGGGGGAACTATCTGAAAGTTGCATAAATCATGCTTTACTCTGTAAGCTTTGTTCTTCGGCTGGAAGATGACCTGACCCTGCAGTTTTTTTAGAGCATGGAGTGATCATTCCTTTGGGTTCAGTTTCAGTTTAAAACTGTCTGAAGTTTTGGCAACTTCATAATAGTTGGTTTGCATCTTTGTCAAGTCTAGTGACGTTTTCTTTATCATTTTGCACTCATACATAATTATGTATTTGAAATTTGAATTCCAAATTTCATCATGTTTGAGGGTTTTTTTTTTCGGCTGTTATTGGTTTGGCCAAATTCCAGTGTTTTTTTTGGTGTTCACTCTCAATTCGTTTAGTAACTTTACCTCATTTGTAATTAATGCAAGTTCAATTAGTTTTTTAGAAACTCCTAATGGAGGTGTACCTGGTTGGGTTATATCTTGAGGTAAACTTTTCATGAAATCAATGATATCAATCTCATTATACCATAAAAGTTTTTTGCCTCTACCATTATCAGGTCATTCATTGAGGACTCTCAAGCTGGCATTAAGATATCCCCCCAGGATAATAACTATATGGGATCCACTGATAGGCTGGTGACACTGTCTGGAACTATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCGAAGCTATCTGAAGATCCACATTACACCCAGTCAATGAATTATCCATTTTCGTACCCGAGTATGTCTTTGTTTAACTTTTCTATTTCATTATGGTATTATATTATTCCTAACAAAAGCTATTAAACACCCACTTGCATTTTGTGTTTTGGCACATGTACTTCATCTCATTTGGGGTACTTTTTTTATCTGCTATATTCGATGCTGCTGGATTATCTTGGTGATGACATGAATAATTTATGTTTTATACAAATCAAACAAGTAGTTGTAGTTGTAGGTCTAAATTGTAACAGATGGTATGTTGAAAAAATGTATTAATCCGCCTGAAGATAACTGACTTATCACTATTATGCAGTGGTCAGAAAACAAGAATGGTCAAATTAGATACTCCTAAATGTTAGCATTATTTTATTTTCTGCCTTCCATCTTTTCTTTTCAGACTTTTCCATTTTTCCATTTAGAAGTGTTGAGAATCTAAATTGGATTTTTCTCTAATTAAAAATGTATTACTCTTCAAGTAGTTAATTTTGGCCTTATACTTTTGAGGAACTCCGAACTTCTGAGATATGGGTCAAAAAAGAGCTGGGATGGTAGTTGAGGAAGTTTTGGATTTATTCTAGGAATCTCTAAAGTTTCTGACCTACCACATAATGTAAAGTAGTGCCAATAGTAGAGTCTAGTTTCTAGTATGTTGAGAGCCAATATAGAGAGCTTATAGTTACAAAAAGGTGAATCTAACGAAACCCAAGAGGGGGAAACAAAAGCACAATAATCCCAAACAATCAGCACATCATGCCTTTCAGGTGATATAATTGCCGAAGTTGGTGTATCAGCGCAGCTATTTTGTTAATTATTGCCATTAGCATTATTTTAGGGATCTACTTGGAGTATAAATGTTAGGAAATGGTTTTTGAACTAGGAAGGGAGCTGATTGCAGAATATTTTGCTGTTTCTGCTATTTTCCTTGCCCATTTAATCTATTGTTTTTTATACAGCATCATACAATACTATGAACTACGGATCCAATGGGGGAGCTGGAGGGAGGTTCCAGAACAATAAGGTTTGTTCTTGAACGGCAGCTTTGCTATCATTATTCTTGTCTGATTGAGAGATCTCTGGAAAATAAGTTACCGACTTTGGTGCTTTAATGCACTCTAATTGGTCTTTCACCATTAAACTGGTATATGCTTGTGATACCATAGCCATTAGTATTTAATATAGGCTTTTCCAGATAGAAAATTTGGGAAATAATCTCAATGGTTTTACGTGGATGTTAGATTATACATTATATCGTCTGAAACAACACTGCCATGCATAGGGTTAACTAATATAGTTGATATCGATGGTCAGAAAGCTTAAAACCCATAAATGTGATGCTTCTCTCATTATATGAATTTCTTGCATTTAAGAATTTCCTGATGCCAATGTCAGGCAGGAAAGGTGTTCCTTTGATACTGGATGTTCTTTATCGATAACAAGCATTCACATAGACAAGAAAGGGTAAATTGCAGGAGAATGTGGAATAGCTGTTCAACTTTTCACCCAGAAGAGAAGTTAAAAAGAAATGAGTAGAGAATAAGATAGCGAGTAAAGAAGCCAGTTATTATGGAGTAGAACGCAATCAAATTTTACTAGAGAGCAATCAATAGCCTTCCTGTTTTATAGCCTAAAAGAGAAATTTATGCACTTGCATTTTTTGTTTCCCGTTCAATCTGTCTGTGGAGCGTGGACTTAAAAAGAATCTAGAGAGTGGTTTCCTCTTTTAATGATTCCTCTTCTCCCAGGCCCCATCCTCCTAACTGCTTGAAGAAATAAAAAATGCATGCAATTGCATAAAACCGGGACTTAATGCGATTGCATAAGTTATTTGTCAATACTTTTTTTATCCTTCCCTGTGACTTTATGACATTGTTGACAGAAGATCTTCTGAAATTGTCCAGGAGGAACGGAGTAACTCCTTGACTATTGGCGTTTCGGATGGCCACATCGGGTTGGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGTTCTAACCCCTCCACCCCGACACTTTCTATTTCCTTTCTGTGCATGAGGCGTTGATATCATTCAAGTTCACGAACGTTACTGTATCATTCTTTTGCAATAAAAAGCTTTTCTTATTACAGGCTAGTGGAGCCAGAATTAAGATATCAGATAGAGGAGATTTCATGTCCGGAACCACTGACAGGTACAGAGGTTCTTTTGGTAAATCCCTTCTTACTTTGGGTACGCAAGTTCTTCATGGTAACAGTAGCATACTTGATTGGTCCATAACTTGCAGGAAAGTAACAATTACGGGGTCACAAAGGGCAATCCGCACCGCTGAATCGATGATTATGCAGAAAGTAGCATATGCTTCTGAGAGGGTAATGCCTTTCAAATTCCTTAAAGACATTCTTACCGAAAATTCTCAGTACATTTCTCTTACGCTCTGTAGAATCTTTTTCTTTTTCCGGGTCGGTTCAGGTTCTAGCACAGTGATAGAATGATTGGAAGTTCAGAATGTTTGTAGTAGAAGCAAGGCCGGGAGATTTTCATTTTTACCATTGAGGGAGAGCTTGTGAATGGCGATGGTCAGAGAAATAGAGTTTAAATTTGTCGAAGCGTTGGGAGAAGCCAGCATTTGATTGAGTCGAATAGAATGATTAGCAGTTTCAAATTGTTTATACAATTGTAGCCCCTTGAATTTATTTTTATATTTTTATGTTTGAGATTTTTATCTCTATTAAATTGTTTGAACGTGCCTTCTCTTCAGAACAGATTTTAGCTTCTTTAGGATGTTCTATTTTCATTTATGGGTGAATTCTTTAGTCTTGAGTTAATTTAATATTGGGCTTGCTGAGAATTTTGGTTATTGTATGTGCTGTTTTTAGCGGAGCGGTAATTGACATCTGTTCTTTCTCTGAA

mRNA sequence

TCAGACAATATGGACAAGGCCACATACATTAGGTTTCTTGTATCAAATGCTGCTGCTGGTTCTGTGATTGGGAAAGGTGGCTCAACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCAAGGAATCATGAATTCTTTCCTGGAACCACTGATAGGATCATTATGGTATCTGGATCAATAAATGAAATATTGAAGGCCATGGAACTTGTTCTTGCTAAGTTGTTGAGTGAGCTTCATGCTGAAGAAGGAGATGATGTTGAACCGAGAACAAAAGTGAGACTGATTGTACCCCATAGTTCTTGTGGAGCTATAATTGGGAAAGGAGGGTCCACTATAAAGTCATTCATTGAGGACTCTCAAGCTGGCATTAAGATATCCCCCCAGGATAATAACTATATGGGATCCACTGATAGGCTGGTGACACTGTCTGGAACTATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCGAAGCTATCTGAAGATCCACATTACACCCAGTCAATGAATTATCCATTTTCGTACCCGACATCATACAATACTATGAACTACGGATCCAATGGGGGAGCTGGAGGGAGGTTCCAGAACAATAAGGAGGAACGGAGTAACTCCTTGACTATTGGCGTTTCGGATGGCCACATCGGGTTGGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGAGCCAGAATTAAGATATCAGATAGAGGAGATTTCATGTCCGGAACCACTGACAGGAAAGTAACAATTACGGGGTCACAAAGGGCAATCCGCACCGCTGAATCGATGATTATGCAGAAAGTAGCATATGCTTCTGAGAGGGTTCTAGCACAGTGATAGAATGATTGGAAGTTCAGAATGTTTGTAGTAGAAGCAAGGCCGGGAGATTTTCATTTTTACCATTGAGGGAGAGCTTGTGAATGGCGATGGTCAGAGAAATAGAGTTTAAATTTGTCGAAGCGTTGGGAGAAGCCAGCATTTGATTGAGTCGAATAGAATGATTAGCAGTTTCAAATTGTTTATACAATTGTAGCCCCTTGAATTTATTTTTATATTTTTATGTTTGAGATTTTTATCTCTATTAAATTGTTTGAACGTGCCTTCTCTTCAGAACAGATTTTAGCTTCTTTAGGATGTTCTATTTTCATTTATGGGTGAATTCTTTAGTCTTGAGTTAATTTAATATTGGGCTTGCTGAGAATTTTGGTTATTGTATGTGCTGTTTTTAGCGGAGCGGTAATTGACATCTGTTCTTTCTCTGAA

Coding sequence (CDS)

TCAGACAATATGGACAAGGCCACATACATTAGGTTTCTTGTATCAAATGCTGCTGCTGGTTCTGTGATTGGGAAAGGTGGCTCAACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCAAGGAATCATGAATTCTTTCCTGGAACCACTGATAGGATCATTATGGTATCTGGATCAATAAATGAAATATTGAAGGCCATGGAACTTGTTCTTGCTAAGTTGTTGAGTGAGCTTCATGCTGAAGAAGGAGATGATGTTGAACCGAGAACAAAAGTGAGACTGATTGTACCCCATAGTTCTTGTGGAGCTATAATTGGGAAAGGAGGGTCCACTATAAAGTCATTCATTGAGGACTCTCAAGCTGGCATTAAGATATCCCCCCAGGATAATAACTATATGGGATCCACTGATAGGCTGGTGACACTGTCTGGAACTATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCGAAGCTATCTGAAGATCCACATTACACCCAGTCAATGAATTATCCATTTTCGTACCCGACATCATACAATACTATGAACTACGGATCCAATGGGGGAGCTGGAGGGAGGTTCCAGAACAATAAGGAGGAACGGAGTAACTCCTTGACTATTGGCGTTTCGGATGGCCACATCGGGTTGGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGAGCCAGAATTAAGATATCAGATAGAGGAGATTTCATGTCCGGAACCACTGACAGGAAAGTAACAATTACGGGGTCACAAAGGGCAATCCGCACCGCTGAATCGATGATTATGCAGAAAGTAGCATATGCTTCTGAGAGGGTTCTAGCACAGTGA

Protein sequence

SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ

Homology

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BLAST of MC09g1397 vs. ExPASy Swiss-Prot
Match: Q9LZ82 (Protein BTR1 OS=Arabidopsis thaliana OX=3702 GN=BTR1 PE=1 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.7e-110
Identity = 201/284 (70.77%), Postives = 250/284 (88.03%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           +D+ +K T+IRFLVSNAAAGSVIGKGGSTI +FQ++SGARIQLSRN EFFPGTTDRIIM+
Sbjct: 28  ADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMI 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSI E++  +EL+L KL SELHAE+G++VEPR ++RL+VP+SSCG IIGKGG+TIKSFI
Sbjct: 88  SGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           E+S+AGIKISP DN + G +DRLVTLSGT EEQMRA DLI++KL+ED HY+Q+++ P+SY
Sbjct: 148 EESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSY 207

Query: 181 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 240
              YN++NY  N G+GG++QN+KEE S ++TIGV+D HIGLV+GRGGRNI+EI+Q +GAR
Sbjct: 208 AAGYNSVNYAPN-GSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGAR 267

Query: 241 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASER 285
           IKISDRGDFMSGTTDRKV+ITG QRAI+ AE+MI QKV  A+ER
Sbjct: 268 IKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATER 310

[Close]

BLAST of MC09g1397 vs. ExPASy Swiss-Prot
Match: Q80WA4 (RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nova1 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-29
Identity = 107/426 (25.12%), Postives = 186/426 (43.66%), Query Frame = 0


Query: 5   DKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSI 64
           D   +++ L+ + AAGS+IGKGG TI   Q ++GA I+LS++ +F+PGTT+R+ ++ G+I
Sbjct: 46  DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI 105

Query: 65  NEILKAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGK 124
            E L A+   +A+ + E+       E    ++P+T        +V++IVP+S+ G IIGK
Sbjct: 106 -EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGK 165

Query: 125 GGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPH-- 184
           GG+T+K+ +E S A +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP   
Sbjct: 166 GGATVKAIMEQSGAWVQLS-QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSG 225

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 226 SCLNISYANVTGPVANSNPTGFPYANTAEVLPTAAAAAGLLGHANLAGVAAFPAVLSGFT 285

Query: 245 ------YTQSMNYPFSYPTSYNTMNYG--------------------------------- 281
                  T ++N   SY  + NT+  G                                 
Sbjct: 286 GNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASE 345

[Close]

BLAST of MC09g1397 vs. ExPASy Swiss-Prot
Match: Q2PFW9 (RNA-binding protein Nova-1 OS=Macaca fascicularis OX=9541 GN=NOVA1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-29
Identity = 106/426 (24.88%), Postives = 186/426 (43.66%), Query Frame = 0


Query: 5   DKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSI 64
           D   +++ L+ + AAGS+IGKGG TI   Q ++GA I+LS++ +F+PGTT+R+ ++ G++
Sbjct: 47  DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 106

Query: 65  NEILKAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGK 124
            E L A+   +A+ + E+       E    ++P+T        +V++IVP+S+ G IIGK
Sbjct: 107 -EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGK 166

Query: 125 GGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPH-- 184
           GG+T+K+ +E S A +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP   
Sbjct: 167 GGATVKAIMEQSGAWVQLS-QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSG 226

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 227 SCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAFPAVLSGFT 286

Query: 245 ------YTQSMNYPFSYPTSYNTMNYG--------------------------------- 281
                  T ++N   SY  + NT+  G                                 
Sbjct: 287 GNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASE 346

[Close]

BLAST of MC09g1397 vs. ExPASy Swiss-Prot
Match: Q9JKN6 (RNA-binding protein Nova-1 OS=Mus musculus OX=10090 GN=Nova1 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 7.9e-27
Identity = 107/450 (23.78%), Postives = 186/450 (41.33%), Query Frame = 0


Query: 5   DKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSI 64
           D   +++ L+ + AAGS+IGKGG TI   Q ++GA I+LS++ +F+PGTT+R+ ++ G+I
Sbjct: 47  DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI 106

Query: 65  NEILKAMELVLAKLLSEL-----HAEEGDDVEPRT------------------------- 124
            E L A+   +A+ + E+       E    ++P+T                         
Sbjct: 107 -EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 166

Query: 125 -------KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLS 184
                  +V++IVP+S+ G IIGKGG+T+K+ +E S A +++S Q  + +   +R+VT+S
Sbjct: 167 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS-QKPDGINLQERVVTVS 226

Query: 185 GTIEEQMRATDLIVSKLSEDPH-------------------------------------- 244
           G  E+  +A +LI+ K+ EDP                                       
Sbjct: 227 GEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAA 286

Query: 245 ------------------------------YTQSMNYPFSYPTSYNTMNYG--------- 281
                                          T ++N   SY  + NT+  G         
Sbjct: 287 AAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGA 346

[Close]

BLAST of MC09g1397 vs. ExPASy Swiss-Prot
Match: P51513 (RNA-binding protein Nova-1 OS=Homo sapiens OX=9606 GN=NOVA1 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26
Identity = 106/450 (23.56%), Postives = 186/450 (41.33%), Query Frame = 0


Query: 5   DKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSI 64
           D   +++ L+ + AAGS+IGKGG TI   Q ++GA I+LS++ +F+PGTT+R+ ++ G++
Sbjct: 47  DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 106

Query: 65  NEILKAMELVLAKLLSEL-----HAEEGDDVEPRT------------------------- 124
            E L A+   +A+ + E+       E    ++P+T                         
Sbjct: 107 -EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 166

Query: 125 -------KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLS 184
                  +V++IVP+S+ G IIGKGG+T+K+ +E S A +++S Q  + +   +R+VT+S
Sbjct: 167 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS-QKPDGINLQERVVTVS 226

Query: 185 GTIEEQMRATDLIVSKLSEDPH-------------------------------------- 244
           G  E+  +A +LI+ K+ EDP                                       
Sbjct: 227 GEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAA 286

Query: 245 ------------------------------YTQSMNYPFSYPTSYNTMNYG--------- 281
                                          T ++N   SY  + NT+  G         
Sbjct: 287 AAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGA 346

[Close]

BLAST of MC09g1397 vs. NCBI nr
Match: XP_022139256.1 (protein BTR1 [Momordica charantia])

HSP 1 Score: 552 bits (1423), Expect = 1.85e-197
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV
Sbjct: 28  SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI
Sbjct: 88  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY
Sbjct: 148 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 207

Query: 181 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 240
           PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR
Sbjct: 208 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 267

Query: 241 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ
Sbjct: 268 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 315

[Close]

BLAST of MC09g1397 vs. NCBI nr
Match: XP_038893255.1 (protein BTR1 [Benincasa hispida])

HSP 1 Score: 543 bits (1399), Expect = 8.40e-194
Identity = 282/288 (97.92%), Postives = 285/288 (98.96%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           SDNM+KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV
Sbjct: 28  SDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI
Sbjct: 88  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY
Sbjct: 148 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 207

Query: 181 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 240
           PTSYN MNYGSNGG GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGAR
Sbjct: 208 PTSYNAMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 267

Query: 241 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           IKISDRGDFMSGTTDRKVTITGSQRAIR AESMI+QKVAYASERVLAQ
Sbjct: 268 IKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVLAQ 315

[Close]

BLAST of MC09g1397 vs. NCBI nr
Match: XP_008446807.1 (PREDICTED: protein BTR1 [Cucumis melo])

HSP 1 Score: 542 bits (1397), Expect = 1.69e-193
Identity = 282/288 (97.92%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV
Sbjct: 28  SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI
Sbjct: 88  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           EDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY
Sbjct: 148 EDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 207

Query: 181 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 240
           PTSYN MNYGSNGG GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGAR
Sbjct: 208 PTSYNAMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 267

Query: 241 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           IKISDRGDFMSGTTDRKVTITGSQRAIR AESMI+QKVAYASERVLAQ
Sbjct: 268 IKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVLAQ 315

[Close]

BLAST of MC09g1397 vs. NCBI nr
Match: KAA0034684.1 (protein BTR1 [Cucumis melo var. makuwa] >TYK09235.1 protein BTR1 [Cucumis melo var. makuwa])

HSP 1 Score: 541 bits (1393), Expect = 1.07e-192
Identity = 281/287 (97.91%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 2   DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 61
           DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVS
Sbjct: 41  DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 100

Query: 62  GSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIE 121
           GSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIE
Sbjct: 101 GSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIE 160

Query: 122 DSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYP 181
           DSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYP
Sbjct: 161 DSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYP 220

Query: 182 TSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGARI 241
           TSYN MNYGSNGG GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGARI
Sbjct: 221 TSYNAMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARI 280

Query: 242 KISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           KISDRGDFMSGTTDRKVTITGSQRAIR AESMI+QKVAYASERVLAQ
Sbjct: 281 KISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVLAQ 327

[Close]

BLAST of MC09g1397 vs. NCBI nr
Match: XP_011655857.1 (protein BTR1 isoform X2 [Cucumis sativus] >KGN52226.1 hypothetical protein Csa_008143 [Cucumis sativus])

HSP 1 Score: 535 bits (1377), Expect = 1.96e-190
Identity = 280/289 (96.89%), Postives = 284/289 (98.27%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           SDNM+KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV
Sbjct: 28  SDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI
Sbjct: 88  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           EDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY
Sbjct: 148 EDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 207

Query: 181 PTSYNTMNYGSNGGA-GGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGA 240
           PTS+N MNYGSNGG  GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGA
Sbjct: 208 PTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGA 267

Query: 241 RIKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           RIKISDRGDFMSGTTDRKVTITGSQRAIR AESMI+QKVAYASERVLAQ
Sbjct: 268 RIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVLAQ 316

[Close]

BLAST of MC09g1397 vs. ExPASy TrEMBL
Match: A0A6J1CC53 (protein BTR1 OS=Momordica charantia OX=3673 GN=LOC111010213 PE=4 SV=1)

HSP 1 Score: 552 bits (1423), Expect = 8.95e-198
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV
Sbjct: 28  SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI
Sbjct: 88  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY
Sbjct: 148 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 207

Query: 181 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 240
           PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR
Sbjct: 208 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 267

Query: 241 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ
Sbjct: 268 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 315

[Close]

BLAST of MC09g1397 vs. ExPASy TrEMBL
Match: A0A1S3BFZ8 (protein BTR1 OS=Cucumis melo OX=3656 GN=LOC103489424 PE=4 SV=1)

HSP 1 Score: 542 bits (1397), Expect = 8.20e-194
Identity = 282/288 (97.92%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV
Sbjct: 28  SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI
Sbjct: 88  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           EDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY
Sbjct: 148 EDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 207

Query: 181 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 240
           PTSYN MNYGSNGG GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGAR
Sbjct: 208 PTSYNAMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 267

Query: 241 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           IKISDRGDFMSGTTDRKVTITGSQRAIR AESMI+QKVAYASERVLAQ
Sbjct: 268 IKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVLAQ 315

[Close]

BLAST of MC09g1397 vs. ExPASy TrEMBL
Match: A0A5A7STZ7 (Protein BTR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002290 PE=4 SV=1)

HSP 1 Score: 541 bits (1393), Expect = 5.18e-193
Identity = 281/287 (97.91%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 2   DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 61
           DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVS
Sbjct: 41  DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 100

Query: 62  GSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIE 121
           GSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIE
Sbjct: 101 GSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIE 160

Query: 122 DSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYP 181
           DSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYP
Sbjct: 161 DSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYP 220

Query: 182 TSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGARI 241
           TSYN MNYGSNGG GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGARI
Sbjct: 221 TSYNAMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARI 280

Query: 242 KISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           KISDRGDFMSGTTDRKVTITGSQRAIR AESMI+QKVAYASERVLAQ
Sbjct: 281 KISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVLAQ 327

[Close]

BLAST of MC09g1397 vs. ExPASy TrEMBL
Match: A0A0A0KWP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621940 PE=4 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 9.49e-191
Identity = 280/289 (96.89%), Postives = 284/289 (98.27%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           SDNM+KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV
Sbjct: 28  SDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI
Sbjct: 88  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           EDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY
Sbjct: 148 EDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 207

Query: 181 PTSYNTMNYGSNGGA-GGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGA 240
           PTS+N MNYGSNGG  GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGA
Sbjct: 208 PTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGA 267

Query: 241 RIKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERVLAQ 288
           RIKISDRGDFMSGTTDRKVTITGSQRAIR AESMI+QKVAYASERVLAQ
Sbjct: 268 RIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVLAQ 316

[Close]

BLAST of MC09g1397 vs. ExPASy TrEMBL
Match: A0A6J1HU77 (protein BTR1-like OS=Cucurbita maxima OX=3661 GN=LOC111467502 PE=4 SV=1)

HSP 1 Score: 527 bits (1358), Expect = 1.24e-187
Identity = 279/303 (92.08%), Postives = 284/303 (93.73%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           SDNM+K TYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV
Sbjct: 28  SDNMEKGTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SG+INEILKAM+LVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI
Sbjct: 88  SGTINEILKAMDLVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY
Sbjct: 148 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 207

Query: 181 PTSYNTMNYGSNGGAGGRFQNNK---------------EERSNSLTIGVSDGHIGLVVGR 240
           PTSYN +NY SNGGAGGRF NNK               EERSNSLTIGVSDGHIGLVVGR
Sbjct: 208 PTSYNAVNYASNGGAGGRFPNNKRLYDTVDRRASEIVQEERSNSLTIGVSDGHIGLVVGR 267

Query: 241 GGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERV 288
           GGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIR+AESMIMQKVAYASERV
Sbjct: 268 GGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRSAESMIMQKVAYASERV 327

[Close]

BLAST of MC09g1397 vs. TAIR 10
Match: AT5G04430.1 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 398.7 bits (1023), Expect = 4.1e-111
Identity = 201/284 (70.77%), Postives = 250/284 (88.03%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           +D+ +K T+IRFLVSNAAAGSVIGKGGSTI +FQ++SGARIQLSRN EFFPGTTDRIIM+
Sbjct: 28  ADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMI 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSI E++  +EL+L KL SELHAE+G++VEPR ++RL+VP+SSCG IIGKGG+TIKSFI
Sbjct: 88  SGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           E+S+AGIKISP DN + G +DRLVTLSGT EEQMRA DLI++KL+ED HY+Q+++ P+SY
Sbjct: 148 EESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSY 207

Query: 181 PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGRNILEISQASGAR 240
              YN++NY  N G+GG++QN+KEE S ++TIGV+D HIGLV+GRGGRNI+EI+Q +GAR
Sbjct: 208 AAGYNSVNYAPN-GSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGAR 267

Query: 241 IKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASER 285
           IKISDRGDFMSGTTDRKV+ITG QRAI+ AE+MI QKV  A+ER
Sbjct: 268 IKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATER 310

[Close]

BLAST of MC09g1397 vs. TAIR 10
Match: AT5G04430.2 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 386.3 bits (991), Expect = 2.1e-107
Identity = 201/305 (65.90%), Postives = 250/305 (81.97%), Query Frame = 0


Query: 1   SDNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 60
           +D+ +K T+IRFLVSNAAAGSVIGKGGSTI +FQ++SGARIQLSRN EFFPGTTDRIIM+
Sbjct: 28  ADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMI 87

Query: 61  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 120
           SGSI E++  +EL+L KL SELHAE+G++VEPR ++RL+VP+SSCG IIGKGG+TIKSFI
Sbjct: 88  SGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFI 147

Query: 121 EDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSY 180
           E+S+AGIKISP DN + G +DRLVTLSGT EEQMRA DLI++KL+ED HY+Q+++ P+SY
Sbjct: 148 EESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSY 207

Query: 181 ---------------------PTSYNTMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHI 240
                                   YN++NY  N G+GG++QN+KEE S ++TIGV+D HI
Sbjct: 208 AGLFYSGFHGPPYAYALPSVATAGYNSVNYAPN-GSGGKYQNHKEEASTTVTIGVADEHI 267

Query: 241 GLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVA 285
           GLV+GRGGRNI+EI+Q +GARIKISDRGDFMSGTTDRKV+ITG QRAI+ AE+MI QKV 
Sbjct: 268 GLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVD 327

[Close]

BLAST of MC09g1397 vs. TAIR 10
Match: AT1G33680.1 (KH domain-containing protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-13
Identity = 61/194 (31.44%), Postives = 98/194 (50.52%), Query Frame = 0


Query: 6   KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSIN 65
           ++T  R  V ++  G++IGKGG  +   Q  SGA+IQ+ R+ E  P +  R + + G+++
Sbjct: 230 QSTTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVS 289

Query: 66  EILKAMELVLAKLLSELHAEEGDDVEPR---TKVRLIVPHSSCGAIIGKGGSTIKSFIED 125
            I KA +L+ A +++E+ A     +  R    ++ + VP    G IIG+GG TIK+    
Sbjct: 290 CIEKAEKLINA-VIAEVEAGGVPALAARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQTK 349

Query: 126 SQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPT 185
           S+A I++ PQ N    S +R V +SG   +   AT LI   + +D         P  Y  
Sbjct: 350 SRARIQLIPQ-NEGDASKERTVRISGDKRQIDIATALIKDVMYQD-------GRPSPYSG 409

Query: 186 SYNTMNYGSNGGAG 197
            +N   Y   G  G
Sbjct: 410 GFNQQAYQPRGPGG 414

[Close]

BLAST of MC09g1397 vs. TAIR 10
Match: AT4G10070.1 (KH domain-containing protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-13
Identity = 59/202 (29.21%), Postives = 97/202 (48.02%), Query Frame = 0


Query: 6   KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSIN 65
           ++T  R  V ++  G +IGKGG TI   Q  SGA+IQ+ R+ E  P +  R + + GS+ 
Sbjct: 174 QSTTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGSV- 233

Query: 66  EILKAMELVLAKLLSELHAEEGDDVEPR-----------TKVRLIVPHSSCGAIIGKGGS 125
             +++ E +++ +++E  A     +  R            ++ + VP+   G IIG+GG 
Sbjct: 234 ACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDKVGLIIGRGGE 293

Query: 126 TIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSM 185
           TIK+    S A  ++ PQ     G  +R V +SG   +   ATD+I   ++++       
Sbjct: 294 TIKNMQTRSGARTQLIPQHAEGDGLKERTVRISGDKMQIDIATDMIKDVMNQNAR----- 353

Query: 186 NYPFSYPTSYNTMNYGSNGGAG 197
             P SY   YN   Y   G  G
Sbjct: 354 --PSSYSGGYNQPAYRPQGPGG 367

[Close]

BLAST of MC09g1397 vs. TAIR 10
Match: AT5G46190.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 72.8 bits (177), Expect = 5.1e-13
Identity = 93/362 (25.69%), Postives = 150/362 (41.44%), Query Frame = 0


Query: 2   DNMDKATYI-RFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 61
           DN D    + R L  +   GSVIGK G  IN  + ++ ARI++    + FPG ++R+I +
Sbjct: 37  DNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFPGCSERVITI 96

Query: 62  SGSINE------------------------ILKAMELVLAKLLSELHAEEGDDVEPRTKV 121
             S++E                        +LK  + ++A L +     + D  + R + 
Sbjct: 97  FCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFR-EC 156

Query: 122 RLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMGST-----DRLVTLSGTIE 181
           RL+VP S C  +IGK GS IK+    ++A +K+  +D +    T     D +V +SG  E
Sbjct: 157 RLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETE 216

Query: 182 EQMRATDLI------VSKLSEDPHYTQSMNYPFS---------------YPTSYNTMNYG 241
              +A   +      VS   + P  T     P S               YP+  +   +G
Sbjct: 217 SVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHG 276

Query: 242 SN---------GGAGGRFQN----------------NKEERSNSLTIGV--SDGHIGLVV 286
           +N          G G    N                    RS  L I V  S   IG V+
Sbjct: 277 ANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKIGRVI 336

The following BLAST results are available for this feature:

BLAST of MC09g1397 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ82	5.7e-110	70.77	Protein BTR1 OS=Arabidopsis thaliana OX=3702 GN=BTR1 PE=1 SV=1	[more]
Q80WA4	1.3e-29	25.12	RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nova1 PE=...	[more]
Q2PFW9	1.7e-29	24.88	RNA-binding protein Nova-1 OS=Macaca fascicularis OX=9541 GN=NOVA1 PE=2 SV=1	[more]
Q9JKN6	7.9e-27	23.78	RNA-binding protein Nova-1 OS=Mus musculus OX=10090 GN=Nova1 PE=1 SV=2	[more]
P51513	1.4e-26	23.56	RNA-binding protein Nova-1 OS=Homo sapiens OX=9606 GN=NOVA1 PE=1 SV=2	[more]

BLAST of MC09g1397 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139256.1	1.85e-197	100.00	protein BTR1 [Momordica charantia]	[more]
XP_038893255.1	8.40e-194	97.92	protein BTR1 [Benincasa hispida]	[more]
XP_008446807.1	1.69e-193	97.92	PREDICTED: protein BTR1 [Cucumis melo]	[more]
KAA0034684.1	1.07e-192	97.91	protein BTR1 [Cucumis melo var. makuwa] >TYK09235.1 protein BTR1 [Cucumis melo v...	[more]
XP_011655857.1	1.96e-190	96.89	protein BTR1 isoform X2 [Cucumis sativus] >KGN52226.1 hypothetical protein Csa_0...	[more]

BLAST of MC09g1397 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CC53	8.95e-198	100.00	protein BTR1 OS=Momordica charantia OX=3673 GN=LOC111010213 PE=4 SV=1	[more]
A0A1S3BFZ8	8.20e-194	97.92	protein BTR1 OS=Cucumis melo OX=3656 GN=LOC103489424 PE=4 SV=1	[more]
A0A5A7STZ7	5.18e-193	97.91	Protein BTR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002290 ...	[more]
A0A0A0KWP6	9.49e-191	96.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621940 PE=4 SV=1	[more]
A0A6J1HU77	1.24e-187	92.08	protein BTR1-like OS=Cucurbita maxima OX=3661 GN=LOC111467502 PE=4 SV=1	[more]

BLAST of MC09g1397 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04430.1	4.1e-111	70.77	binding to TOMV RNA 1L (long form)	[more]
AT5G04430.2	2.1e-107	65.90	binding to TOMV RNA 1L (long form)	[more]
AT1G33680.1	1.3e-13	31.44	KH domain-containing protein	[more]
AT4G10070.1	2.3e-13	29.21	KH domain-containing protein	[more]
AT5G46190.1	5.1e-13	25.69	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 6..79 e-value: 1.6E-11 score: 54.3 coord: 92..165 e-value: 5.3E-11 score: 52.6 coord: 206..279 e-value: 1.1E-13 score: 61.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 208..281 e-value: 1.8E-19 score: 71.3
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 92..169 e-value: 8.0E-20 score: 72.4 coord: 4..81 e-value: 4.3E-20 score: 73.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 8..81
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 209..280
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 95..169
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 10..75 e-value: 9.0E-15 score: 54.3 coord: 96..160 e-value: 2.0E-14 score: 53.1 coord: 211..276 e-value: 7.8E-14 score: 51.2
None	No IPR available	PANTHER	PTHR10288:SF280	BNAC02G02730D PROTEIN	coord: 1..285
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 1..285
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 7..74 score: 16.37393
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 207..274 score: 17.317274
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 93..160 score: 15.556364
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 10..75 e-value: 8.31791E-20 score: 79.0575
None	No IPR available	CDD	cd00105	KH-I	coord: 209..275 e-value: 4.41467E-13 score: 61.0367
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 96..161 e-value: 1.58538E-19 score: 78.2871

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1397.1	MC09g1397.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding