MC09g1376 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g1376
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionthioredoxin-like 3-2, chloroplastic
LocationMC09: 19845177 .. 19848685 (-)
RNA-Seq ExpressionMC09g1376
SyntenyMC09g1376
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCATCTCTGCCACACCCATTTACCAACGACAACTACAGCTCTGGTTTCCCGCCGTTGTCGGATGAGGTACCTCTCCCTCTTCCAAAATTCAATCAAAACCCAGTTTTATCGTCCTTATGGATTCCCAATTTTCCATCCTAGGATTATAATTTCTTCCAAAGCAACTCATTCCCTATAATTTCTTCCCTCAATCGATCCCCCAATTTCATTTTTCTTCCGCTGAACTATTATATTAATTCAACATCACACGCCCATCTGGGGTTTTTTCCCCTTTTTTAGGCTAATTCGAGATTTTCTTTAATGGAAAGTTGGATCATTCTTCTTTTTCCCTGACTGGCCTGCTTCTTCTTCTTTTCTTCCATTTTTACTACCCAATTCGGTAGCATTTCGTTTTCTTTGATTTCTTATTTCTCATCTTTTCTATTTGGTGGGACATTAGATTAGATACTGGGAGGAGCTTCATTTGGTTTTGATACCTATTTTTCTCTTTTTTAATAATATTGACCGACGAAGCAGGGGCTCTTCGACGGCGATGGGGAAACGAAAGTTGCACTGGTCGTCGGTGCATGGGGTGGCGCCGCCGGAGATGGAGGCGGTGCCGAAGACCACAGCGTCGGTGGTGGAGTGTGCTTGCACGACCCAGACGGCAGCTTCGTTGGTGCCTTGAGAGGGTCTGGGTGGGGGAGGTATAATTCTAAACCGGTTTAGGTTTAAAACAACCCAATGTTGAACCAACTCGTACATCTGTCCAATATATTTGTACACATGGATTTGCAAGGCAAATCACACTTCTGTTAAAACTAACCTAATTTTTAACGGTAGGGACTAAATTGTAACTAGTTTTAAAGTAGAGTTACTAAATCGTTACTTTTGAAATTTCAAGGACTAAATTGTTACTTTGATGAAAGTTCAGGACCAAATATGTATTTTAACCTAAACTTAACTTGAAGAAAGTATAGTAATTTTTACATTCTGATAAAATGTATGTTCCAACAATTGTTAAAAAGAAATATTCTCACATAAGTTAGAATGAATTGATAAGATTTTAGAGAAAAAAACGAGGTTAAAATTTAAAATTATTTTTATTTTACGTGAAAATTTCATGAGTTTTATTTCGTTGATCTATTCGATTTAATCCGGTGGAAATTTTGATTTTATTAAAATTCATGAATTTTCAAAGATTTTTACCTTTCCAAAATTAGTGGATGAATTAATAGAAATTTAATAGAAGAAAAAATTACAAACATTTTTTTAGTATAGGGTGGAAATTCGAACTTATGACCTCATATGTCAATTACTAAATTAATAACAAAATTTATAACATTTGTCTAAATCTAGAGTTTAATAAAATAATTAAATGATCAAATCGAACACAGTTCAAGTGGTTAAGGTACCTATCTCTCGTCAAAAGGTACCTATCTCTCGTCAAAAGATCATGACTTCGAATTCCTATCTACGTGTTGTACTAAGAAAATAATAATAATTAAATGAAATTACAAGTCTAAAAGAAAAAAAACGATAGAGGTCATTAATGGCTGCATGAGGCAGCCACAACTTACTTTTCAATTTATTTATTCATTTTTATTTATCATTTTATTGTTTATTGAATTCTGTTTGCTTTTGTTTTTTCATTAACAACGAAATGGCGTTTCGTTAAAAGGTTTGCACTTTTGAAAATCGAGCGTTGAAGTTGAAGCTCTGACCCTACGCCGGTGGAACCCAACCGGAACCCTCCTTAGTCTGCCGCCGGCCCGATCAAACCTACCGCCGCCACCACACGCGCCTCTGATCTCTTCTTCATCTCTTCTCTCTCGCTGTTTCCCGATTCTTCTCCCTTCCGAAATGGTGAAAGCTTTGCCCCTTCACCTCGGAACCGCGAAATCTTTTGCCAAATTCCACGCCCCCTTTGATCTTTCCACGCCTCCCCATCTTCCGGCCGGGAGGCTCGCCGGCTCCGGTTTCAACAGGCTTCCTTTGCCCACAAGGTTTCCTCCGCTTTCCCAGAAAGTTTCTGCCACTGGGGAGAAGACTTCGCTCCTCGGGGCTTGGACCCAGGAGAGTCCCTTGCAGTTTCGAGATGAATCCCCTGTGTCCATCGAGCTCAAGTCCATTTCTAGCGAACATGAATTTGACCAGGCAATTTTAGATGCAGCGGAACGCGACGAGCTCGTGATTCTTGTATGGTATGTACGCGTTTTCTGGGAATTTTTTTTGTGTTGATCGTGGAAATTTCTTCCCCAGCGTTTAAATTGGTATTTCTTTTTGGAAGATTTAGAGGATGTGAATGTATTTGTTTTTGGCTGGATCTTATTTGATCAGAAGTTTACTTGGCTAGATTTTCCCTGGGGTTTCATTGAAACAGAATAACTTCCGTTGCACATTGATTGTGATAATTTTGAAGTGAATGATGCTTTATTTTCTCCAGTTTTCCTTACCAGTATTTTAAAGTACAATTCTCTTTATCTTCTTTTGTTGAAAAATGAGTCTGTGTGGATCTGTAGGATGGCTGACTGGTGCAGAAATTATATTTATTTAAAACCCCAATTGGAAAGATTGGCTGCAGATTATTACCCCAGGTTAGCTCTTTAGCCCATTCCTTCTGACCAAGTAAATGGTTAAAATTTGTACCATATTATCATTCTCCAACTGCTGGTGGATAATTCTAAAAAGACCAGTGTGCCAGTACTTACTGAAGTTGTGTACGTGCTTGATAAATTGTAGATTGCAATTCTACTGCATTGATGTCAATACGGTGCCACACAAGCTAGTTGTTCGTGCCGGGTTAGCTGTAAGTCCCTTTCCAAGCTTTTGATACTTATAATGATCTTCATAGGAAAATTGTTCTTCTGTAAGGAAATGATTTTCTTTGGATATTGTAACTATGAACTATCCCTTTGTATTGTACTTCTCTGAAATGTTGGGGTCTGGGAATTATAACAACCTGGTAGTTTCAGGCTTGGCTAAGTCCACCTTTAGATTTTGGCAATTAAATTTTCTGTTGTCATGGGGACTCCAGATTTCTGTTGACAGTAGAAGTTGGACTTCGGTTTCATTACCATTAGGAACATTTCCAATATGCATTTTGAACATCCTGGACAGAGGGCATGTTGAGCTTGTATTAGTTTTATGGATGAGTTGATTGAATAAGCTGCATAATCTGTTTTCTCTCTCATTTTAATGTGTGCAAACTTAAAATCTTTCCATCCTGGGTTAACTGCTACAAGTCCTCATAGTGTTATTTTTGTACATTTTCTCATGTATCTCAACCTTTTGTCGTTTCAATCTACCAGAAGATGCCAGCTATACAGGTGAGTTCCTTCACGATTACCTCTTACAATTGGAAATCTTCCTCTCTACTACTAATCACTAATGTTCTGAAGATCTTGATGACATTTGTTACAGCTATGGAAGGATGGTAAGAAGCAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTCGCCAACGATGTTCAGAAAATGATCGAATGTGAGCTAACAGGCGAG

mRNA sequence

CTCCATCTCTGCCACACCCATTTACCAACGACAACTACAGCTCTGGTTTCCCGCCGTTGTCGGATGAGGGGCTCTTCGACGGCGATGGGGAAACGAAAGTTGCACTGGTCGTCGGTGCATGGGGTGGCGCCGCCGGAGATGGAGGCGGTGCCGAAGACCACAGCGTCGGTGGTGGAGTGTGCTTGCACGACCCAGACGGCAGCTTCGTTGGTGCCTTGAGAGGGTCTGGGTGGGGGAGGTTTGCACTTTTGAAAATCGAGCGTTGAAGTTGAAGCTCTGACCCTACGCCGGTGGAACCCAACCGGAACCCTCCTTAGTCTGCCGCCGGCCCGATCAAACCTACCGCCGCCACCACACGCGCCTCTGATCTCTTCTTCATCTCTTCTCTCTCGCTGTTTCCCGATTCTTCTCCCTTCCGAAATGGTGAAAGCTTTGCCCCTTCACCTCGGAACCGCGAAATCTTTTGCCAAATTCCACGCCCCCTTTGATCTTTCCACGCCTCCCCATCTTCCGGCCGGGAGGCTCGCCGGCTCCGGTTTCAACAGGCTTCCTTTGCCCACAAGGTTTCCTCCGCTTTCCCAGAAAGTTTCTGCCACTGGGGAGAAGACTTCGCTCCTCGGGGCTTGGACCCAGGAGAGTCCCTTGCAGTTTCGAGATGAATCCCCTGTGTCCATCGAGCTCAAGTCCATTTCTAGCGAACATGAATTTGACCAGGCAATTTTAGATGCAGCGGAACGCGACGAGCTCGTGATTCTTGTATGGATGGCTGACTGGTGCAGAAATTATATTTATTTAAAACCCCAATTGGAAAGATTGGCTGCAGATTATTACCCCAGATTGCAATTCTACTGCATTGATGTCAATACGGTGCCACACAAGCTAGTTGTTCGTGCCGGGTTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAGCAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTCGCCAACGATGTTCAGAAAATGATCGAATGTGAGCTAACAGGCGAG

Coding sequence (CDS)

ATGGTGAAAGCTTTGCCCCTTCACCTCGGAACCGCGAAATCTTTTGCCAAATTCCACGCCCCCTTTGATCTTTCCACGCCTCCCCATCTTCCGGCCGGGAGGCTCGCCGGCTCCGGTTTCAACAGGCTTCCTTTGCCCACAAGGTTTCCTCCGCTTTCCCAGAAAGTTTCTGCCACTGGGGAGAAGACTTCGCTCCTCGGGGCTTGGACCCAGGAGAGTCCCTTGCAGTTTCGAGATGAATCCCCTGTGTCCATCGAGCTCAAGTCCATTTCTAGCGAACATGAATTTGACCAGGCAATTTTAGATGCAGCGGAACGCGACGAGCTCGTGATTCTTGTATGGATGGCTGACTGGTGCAGAAATTATATTTATTTAAAACCCCAATTGGAAAGATTGGCTGCAGATTATTACCCCAGATTGCAATTCTACTGCATTGATGTCAATACGGTGCCACACAAGCTAGTTGTTCGTGCCGGGTTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAGCAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTCGCCAACGATGTTCAGAAAATGATCGAATGTGAGCTAACAGGCGAG

Protein sequence

MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATGEKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVANDVQKMIECELTGE
Homology
[Close]
BLAST of MC09g1376 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-41
Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 0 

Query: 28  PHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATGEKTSLLGAWTQESPLQFRDESPVSIEL 87
           P +P  R   S F+R P   ++   + K+    E+   +    Q+  LQ  D+SPVS+EL
Sbjct: 20  PLVPPYRQTSSSFSR-PRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVEL 79

Query: 88  KSISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQFYCIDV 147
             I  E  FDQ + DA +  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +DV
Sbjct: 80  GPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDV 139

Query: 148 NTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVANDVQKMIE 197
           N VP++LV RAG+ KMP IQLW+DG+KQ EVIG +KA+ V N+V++MIE
Sbjct: 140 NAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIE 187

[Close]
BLAST of MC09g1376 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 118.6 bits (296), Expect = 8.0e-26
Identity = 52/114 (45.61%), Postives = 80/114 (70.18%), Query Frame = 0 

Query: 82  PVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I++  E D  +  A +  + +I+ WMA WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVANDVQKMI 196
           FY +DVN VP  LV R  ++KMP IQLWK+ + ++EVIG +K +LV  +V+++I
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELI 206

[Close]
BLAST of MC09g1376 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24
Identity = 52/112 (46.43%), Postives = 79/112 (70.54%), Query Frame = 0 

Query: 85  IELKSISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQFYC 144
           +E++ I S  + D A+  + E  + +I+ WMA WCR  IYLKP+LE++A + +P ++FY 
Sbjct: 80  VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRLEKIAGE-FPGVRFYF 139

Query: 145 IDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVANDVQKMIE 197
           +DVN VP  +V R  + KMP IQLWKDG+   EVIG +KA+LV ++V++MI+
Sbjct: 140 VDVNKVPQTVVKRGNITKMPTIQLWKDGEWAAEVIGGHKAWLVMDEVREMIQ 190

[Close]
BLAST of MC09g1376 vs. ExPASy Swiss-Prot
Match: P80028 (Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 26/91 (28.57%), Postives = 47/91 (51.65%), Query Frame = 0 

Query: 90  ISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQFYCIDVNT 149
           I S+  +D  +    E  + +++ + A WC     + P  E L+ DY  ++ F  +DV+ 
Sbjct: 8   IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA 67

Query: 150 VPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 181
           V   +   AG+  MP   ++KDG K D+++G
Sbjct: 68  VA-AVAEAAGITAMPTFHVYKDGVKADDLVG 97

[Close]
BLAST of MC09g1376 vs. ExPASy Swiss-Prot
Match: P37395 (Thioredoxin OS=Cyanidium caldarium OX=2771 GN=trxA PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.7e-05
Identity = 29/114 (25.44%), Postives = 55/114 (48.25%), Query Frame = 0 

Query: 82  PVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQ 141
           P  I++   S E E           ++LV++ + A WC     + P ++ LA +Y  +++
Sbjct: 2   PSPIQVTDFSFEKE-------VVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVK 61

Query: 142 FYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVANDVQKMI 196
              I+ +  P  +    G+  +P + L+KDGK+ D VIG      + N ++K +
Sbjct: 62  IVKINTDENP-SISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107

[Close]
BLAST of MC09g1376 vs. NCBI nr
Match: XP_022138917.1 (thioredoxin-like 3-2, chloroplastic [Momordica charantia] >XP_022138918.1 thioredoxin-like 3-2, chloroplastic [Momordica charantia] >XP_022138919.1 thioredoxin-like 3-2, chloroplastic [Momordica charantia])

HSP 1 Score: 413 bits (1061), Expect = 1.40e-145
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG
Sbjct: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60

Query: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120
           EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR
Sbjct: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180

Query: 181 LYKAYLVANDVQKMIECELTGE 202
           LYKAYLVANDVQKMIECELTGE
Sbjct: 181 LYKAYLVANDVQKMIECELTGE 202

[Close]
BLAST of MC09g1376 vs. NCBI nr
Match: XP_038891538.1 (thioredoxin-like 3-2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 346 bits (888), Expect = 3.43e-119
Identity = 175/203 (86.21%), Postives = 182/203 (89.66%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLHLG  KSF KF   FDL  PP LP+ RLAGSGFNRLPL  +FPPLSQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAGSGFNRLPLCRKFPPLSQKVSATG 60

Query: 61  EKT-SLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWC 120
           EKT SLLGAWTQ+S LQFRDESPVSIELKSI SE EFD+AI DA +R+ELVILVWMA+WC
Sbjct: 61  EKTTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC 120

Query: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI 180
           RNYIYLKPQLERLAADYYPRLQFYCIDVN VPHKLVVRAGLAKMPAIQLWKDGKKQDEVI
Sbjct: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI 180

Query: 181 GLYKAYLVANDVQKMIECELTGE 202
           GLYKAYLV NDVQKMIE ELTGE
Sbjct: 181 GLYKAYLVINDVQKMIERELTGE 203

[Close]
BLAST of MC09g1376 vs. NCBI nr
Match: XP_038891539.1 (thioredoxin-like 3-2, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 340 bits (871), Expect = 1.29e-116
Identity = 174/203 (85.71%), Postives = 181/203 (89.16%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLHLG  KSF KF   FDL  PP LP+ RLAGSGFNRLPL  +FPPLSQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAGSGFNRLPLCRKFPPLSQKVSATG 60

Query: 61  EKT-SLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWC 120
           EKT SLLGAWTQ+S LQFRDESPVSIELKSI SE EFD+AI DA +R+ELVILVWMA+WC
Sbjct: 61  EKTTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC 120

Query: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI 180
           RNYIYLKPQLERLAADYYPRLQFYCIDVN VPHKLVVRAGLA MPAIQLWKDGKKQDEVI
Sbjct: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA-MPAIQLWKDGKKQDEVI 180

Query: 181 GLYKAYLVANDVQKMIECELTGE 202
           GLYKAYLV NDVQKMIE ELTGE
Sbjct: 181 GLYKAYLVINDVQKMIERELTGE 202

[Close]
BLAST of MC09g1376 vs. NCBI nr
Match: XP_008446852.1 (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X8 [Cucumis melo] >TYK09259.1 thioredoxin-like 3-2 [Cucumis melo var. makuwa])

HSP 1 Score: 339 bits (870), Expect = 1.83e-116
Identity = 169/202 (83.66%), Postives = 179/202 (88.61%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLHLG  KSF KF + FDL   P L + RL GSGFNRLPL  +FPP+ QKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120
           EKTSLLGAWTQ+S LQFRDESPVSIELKSISSE EFD+AI DA ER+ELVILVWMA+WCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN VPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVANDVQKMIECELTGE 202
           LYKAYLV NDV+KMIE ELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]
BLAST of MC09g1376 vs. NCBI nr
Match: XP_004142496.2 (thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus] >KGN52252.1 hypothetical protein Csa_008733 [Cucumis sativus])

HSP 1 Score: 338 bits (866), Expect = 7.46e-116
Identity = 169/202 (83.66%), Postives = 178/202 (88.12%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLH G  KSF KF + FDL   P L + RLAGSGFNRLPL  +FPPL QKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120
           EKTSL GAWTQ+S LQFRDESPVSIELKSISSE EFD+AI DA ER+ELVILVWMA+WCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN VPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVANDVQKMIECELTGE 202
           LYKAYLV NDV+KMIE ELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]
BLAST of MC09g1376 vs. ExPASy TrEMBL
Match: A0A6J1CBF6 (thioredoxin-like 3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009980 PE=4 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 6.77e-146
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG
Sbjct: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60

Query: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120
           EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR
Sbjct: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180

Query: 181 LYKAYLVANDVQKMIECELTGE 202
           LYKAYLVANDVQKMIECELTGE
Sbjct: 181 LYKAYLVANDVQKMIECELTGE 202

[Close]
BLAST of MC09g1376 vs. ExPASy TrEMBL
Match: A0A5D3CG32 (Thioredoxin-like 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002530 PE=4 SV=1)

HSP 1 Score: 339 bits (870), Expect = 8.88e-117
Identity = 169/202 (83.66%), Postives = 179/202 (88.61%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLHLG  KSF KF + FDL   P L + RL GSGFNRLPL  +FPP+ QKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120
           EKTSLLGAWTQ+S LQFRDESPVSIELKSISSE EFD+AI DA ER+ELVILVWMA+WCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN VPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVANDVQKMIECELTGE 202
           LYKAYLV NDV+KMIE ELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]
BLAST of MC09g1376 vs. ExPASy TrEMBL
Match: A0A1S3BGQ4 (thioredoxin-like 3-2, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 339 bits (870), Expect = 8.88e-117
Identity = 169/202 (83.66%), Postives = 179/202 (88.61%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLHLG  KSF KF + FDL   P L + RL GSGFNRLPL  +FPP+ QKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120
           EKTSLLGAWTQ+S LQFRDESPVSIELKSISSE EFD+AI DA ER+ELVILVWMA+WCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN VPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVANDVQKMIECELTGE 202
           LYKAYLV NDV+KMIE ELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]
BLAST of MC09g1376 vs. ExPASy TrEMBL
Match: A0A0A0KUX7 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622670 PE=4 SV=1)

HSP 1 Score: 338 bits (866), Expect = 3.61e-116
Identity = 169/202 (83.66%), Postives = 178/202 (88.12%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLH G  KSF KF + FDL   P L + RLAGSGFNRLPL  +FPPL QKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120
           EKTSL GAWTQ+S LQFRDESPVSIELKSISSE EFD+AI DA ER+ELVILVWMA+WCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN VPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVANDVQKMIECELTGE 202
           LYKAYLV NDV+KMIE ELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]
BLAST of MC09g1376 vs. ExPASy TrEMBL
Match: A0A1S3BG27 (thioredoxin-like 3-2, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.97e-114
Identity = 169/206 (82.04%), Postives = 179/206 (86.89%), Query Frame = 0 

Query: 1   MVKALPLHLGTAKSFAKFHAPFDLSTPPHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATG 60
           MVKALPLHLG  KSF KF + FDL   P L + RL GSGFNRLPL  +FPP+ QKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQESPLQFRDESPVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCR 120
           EKTSLLGAWTQ+S LQFRDESPVSIELKSISSE EFD+AI DA ER+ELVILVWMA+WCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNTVPHKLVVRAGLA----KMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN VPHKLVVRAGLA    KMPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180

Query: 181 EVIGLYKAYLVANDVQKMIECELTGE 202
           EV+GLYKAYLV NDV+KMIE ELT E
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 206

[Close]
BLAST of MC09g1376 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 0 

Query: 28  PHLPAGRLAGSGFNRLPLPTRFPPLSQKVSATGEKTSLLGAWTQESPLQFRDESPVSIEL 87
           P +P  R   S F+R P   ++   + K+    E+   +    Q+  LQ  D+SPVS+EL
Sbjct: 20  PLVPPYRQTSSSFSR-PRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVEL 79

Query: 88  KSISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQFYCIDV 147
             I  E  FDQ + DA +  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +DV
Sbjct: 80  GPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDV 139

Query: 148 NTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVANDVQKMIE 197
           N VP++LV RAG+ KMP IQLW+DG+KQ EVIG +KA+ V N+V++MIE
Sbjct: 140 NAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIE 187

[Close]
BLAST of MC09g1376 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 118.6 bits (296), Expect = 5.7e-27
Identity = 52/114 (45.61%), Postives = 80/114 (70.18%), Query Frame = 0 

Query: 82  PVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I++  E D  +  A +  + +I+ WMA WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNTVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVANDVQKMI 196
           FY +DVN VP  LV R  ++KMP IQLWK+ + ++EVIG +K +LV  +V+++I
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELI 206

[Close]
BLAST of MC09g1376 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0 

Query: 82  PVSIELKSISSEHEFDQAILDAAERDELVILVWMADWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I++  E D  +  A +  + +I+ WMA WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNTVPHKLVVRAGLA 162
           FY +DVN VP  LV R  ++
Sbjct: 153 FYYVDVNKVPQTLVKRGNIS 172

The following BLAST results are available for this feature:
BLAST of MC09g1376 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZT62.3e-4149.70Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE... [more]
Q9FG368.0e-2645.61Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE... [more]
Q6Z7L32.0e-2446.43Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
P800281.2e-0528.57Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3[more]
P373952.7e-0525.44Thioredoxin OS=Cyanidium caldarium OX=2771 GN=trxA PE=3 SV=1[more]
BLAST of MC09g1376 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022138917.11.40e-145100.00thioredoxin-like 3-2, chloroplastic [Momordica charantia] >XP_022138918.1 thiore... [more]
XP_038891538.13.43e-11986.21thioredoxin-like 3-2, chloroplastic isoform X1 [Benincasa hispida][more]
XP_038891539.11.29e-11685.71thioredoxin-like 3-2, chloroplastic isoform X2 [Benincasa hispida][more]
XP_008446852.11.83e-11683.66PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X8 [Cucumis melo] >TYK092... [more]
XP_004142496.27.46e-11683.66thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus] >KGN52252.1 hyp... [more]
BLAST of MC09g1376 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CBF66.77e-146100.00thioredoxin-like 3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110099... [more]
A0A5D3CG328.88e-11783.66Thioredoxin-like 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475... [more]
A0A1S3BGQ48.88e-11783.66thioredoxin-like 3-2, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A0A0KUX73.61e-11683.66Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622670... [more]
A0A1S3BG271.97e-11482.04thioredoxin-like 3-2, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103... [more]
BLAST of MC09g1376 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G04260.11.7e-4249.70WCRKC thioredoxin 2 [more]
AT5G06690.15.7e-2745.61WCRKC thioredoxin 1 [more]
AT5G06690.21.0e-1543.75WCRKC thioredoxin 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 77..193
e-value: 1.7E-14
score: 55.5
NoneNo IPR availablePANTHERPTHR47192:SF4THIOREDOXIN-LIKE 3-2, CHLOROPLASTICcoord: 49..198
NoneNo IPR availableCDDcd02947TRX_familycoord: 95..196
e-value: 1.44378E-13
score: 61.8053
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 92..184
e-value: 2.6E-10
score: 40.2
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 43..200
score: 8.974165
IPR044253Thioredoxin-like 3-1/3-2PANTHERPTHR47192THIOREDOXIN-LIKE 3-2, CHLOROPLASTICcoord: 49..198
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 87..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g1376.1MC09g1376.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009570 chloroplast stroma