MC09g1363 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g1363
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionloricrin-like
LocationMC09: 19696076 .. 19696681 (+)
RNA-Seq ExpressionMC09g1363
SyntenyMC09g1363
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCACTCCTAAGGCGATACCTGCCTTTTGTCCACCACTCAGCCCTTTTGAATCTGCGCCACCCTTTTCATTCAACGGTAGCTGTGTGCTTGGCGCCGGCGGCGGAGATGAACCAACATCTGGCGCAGGTGGTGAGATGTTGACATTCGGTGGTGGCGGTGGAGAGGAGTCCGTCCCGTTCGACGACGGTGGTGGCGGAGGTGGAGCATCGGTTCCATTGGATGGGGGTGGCGGAGGCGGAGCATCGGTGCCGTTGGACGGGGGTGGCGGAGGTGGAGTGTCGGTCCCGTTGGACGGGGGTGGCGGAGGTGGAGCATTGGTTCCGTTCGATGGAGGTGGCGGAGGAGGACTATCGGTTCCGTTGGATGGGGGTGGCGGAGGTGGAGCATCGGTCCCGTTGGATGGCGGTGGCGGAGGTGGAGTGTCAGTCCCGTTGGACGACGGTGGCGGAGGTGGAGTGTCGGTCCCGTTGGACGGGGGTGGCGGAGGTGGAGCATTAGTTCCGTTCGATGGGGGTGGCGGAGGAGGACTATCGGTTCCGTTGGATGGCGGTGGCGGAGGCGGAGCATCGGTTCCGTTCAAGGGGGGTGGCGGAGGTGGAGCATCG

mRNA sequence

ATCACTCCTAAGGCGATACCTGCCTTTTGTCCACCACTCAGCCCTTTTGAATCTGCGCCACCCTTTTCATTCAACGGTAGCTGTGTGCTTGGCGCCGGCGGCGGAGATGAACCAACATCTGGCGCAGGTGGTGAGATGTTGACATTCGGTGGTGGCGGTGGAGAGGAGTCCGTCCCGTTCGACGACGGTGGTGGCGGAGGTGGAGCATCGGTTCCATTGGATGGGGGTGGCGGAGGCGGAGCATCGGTGCCGTTGGACGGGGGTGGCGGAGGTGGAGTGTCGGTCCCGTTGGACGGGGGTGGCGGAGGTGGAGCATTGGTTCCGTTCGATGGAGGTGGCGGAGGAGGACTATCGGTTCCGTTGGATGGGGGTGGCGGAGGTGGAGCATCGGTCCCGTTGGATGGCGGTGGCGGAGGTGGAGTGTCAGTCCCGTTGGACGACGGTGGCGGAGGTGGAGTGTCGGTCCCGTTGGACGGGGGTGGCGGAGGTGGAGCATTAGTTCCGTTCGATGGGGGTGGCGGAGGAGGACTATCGGTTCCGTTGGATGGCGGTGGCGGAGGCGGAGCATCGGTTCCGTTCAAGGGGGGTGGCGGAGGTGGAGCATCG

Coding sequence (CDS)

ATCACTCCTAAGGCGATACCTGCCTTTTGTCCACCACTCAGCCCTTTTGAATCTGCGCCACCCTTTTCATTCAACGGTAGCTGTGTGCTTGGCGCCGGCGGCGGAGATGAACCAACATCTGGCGCAGGTGGTGAGATGTTGACATTCGGTGGTGGCGGTGGAGAGGAGTCCGTCCCGTTCGACGACGGTGGTGGCGGAGGTGGAGCATCGGTTCCATTGGATGGGGGTGGCGGAGGCGGAGCATCGGTGCCGTTGGACGGGGGTGGCGGAGGTGGAGTGTCGGTCCCGTTGGACGGGGGTGGCGGAGGTGGAGCATTGGTTCCGTTCGATGGAGGTGGCGGAGGAGGACTATCGGTTCCGTTGGATGGGGGTGGCGGAGGTGGAGCATCGGTCCCGTTGGATGGCGGTGGCGGAGGTGGAGTGTCAGTCCCGTTGGACGACGGTGGCGGAGGTGGAGTGTCGGTCCCGTTGGACGGGGGTGGCGGAGGTGGAGCATTAGTTCCGTTCGATGGGGGTGGCGGAGGAGGACTATCGGTTCCGTTGGATGGCGGTGGCGGAGGCGGAGCATCGGTTCCGTTCAAGGGGGGTGGCGGAGGTGGAGCATCG

Protein sequence

ITPKAIPAFCPPLSPFESAPPFSFNGSCVLGAGGGDEPTSGAGGEMLTFGGGGGEESVPFDDGGGGGGASVPLDGGGGGGASVPLDGGGGGGVSVPLDGGGGGGALVPFDGGGGGGLSVPLDGGGGGGASVPLDGGGGGGVSVPLDDGGGGGVSVPLDGGGGGGALVPFDGGGGGGLSVPLDGGGGGGASVPFKGGGGGGAS
Homology
BLAST of MC09g1363 vs. NCBI nr
Match: XP_031741791.1 (glycine-rich protein 23-like [Cucumis sativus])

HSP 1 Score: 221 bits (564), Expect = 4.05e-69
Identity = 156/225 (69.33%), Postives = 161/225 (71.56%), Query Frame = 0

Query: 1   ITPKAIPAFCPPLSPFESAPPFSFNGSCVLGAGGGDEPT--SGAGGEMLTFGGGGGEESV 60
           ITP AIPAFCPPL+PFE  PPFSFN    +G GGGDEP    GAGG++    GGGG E V
Sbjct: 15  ITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELV 74

Query: 61  PFDDGGG---------------------GGGASVPLDGGGGGGASVPLDGGGGGGVSVPL 120
             D GGG                     GGGASV LDGGGGGGASV LDGGGGGG SV L
Sbjct: 75  VLDGGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGASVALDGGGGGGASVAL 134

Query: 121 DGGGGGGALVPFDGGGGGGLSVPLDGGGGGGASVPLDGGGGGGVSVPLDDGGGGGVSVPL 180
           DGGGGGGA V  DGGGGGG+SV LDGGGGGGASV LDGGGGGG SV LD GGGGG SV L
Sbjct: 135 DGGGGGGASVALDGGGGGGVSVALDGGGGGGASVALDGGGGGGASVALDGGGGGGASVAL 194

Query: 181 DGGGGGGALVPFDGGGGGGLSVPLDGGGGGGASVPFKGGGGGGAS 202
           DGGGGGGA V  DGGGGGG SV LDGGGGGGASV   GGGGGGAS
Sbjct: 195 DGGGGGGASVALDGGGGGGASVALDGGGGGGASVALDGGGGGGAS 239

BLAST of MC09g1363 vs. NCBI nr
Match: KAG6601160.1 (hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144 bits (362), Expect = 5.36e-40
Identity = 106/149 (71.14%), Postives = 109/149 (73.15%), Query Frame = 0

Query: 6   IPAFCPPLSPFESAPPFSFNGSCVLGAGGGDEPTSG--AGGEMLTFGGGGGEESVPFDDG 65
           +PAFCPPLSPFESAPPFSFN   V GAGGGDE TSG  AGGEML  GGGGG  SV FD  
Sbjct: 1   MPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGL-SVVFD-- 60

Query: 66  GGGGGASVPLDGGGGGGASVPLDGGGGGGVSVPLDGGGGGGALVPFDGGGGGGLSVPLDG 125
           GGGGG  V LDGGGGGG  V LDG GGGG+ V LDG GGGG  V  DG GGGGL V LDG
Sbjct: 61  GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDG 120

Query: 126 GGGGGASVPLDGGGGGGVSVPLDDGGGGG 152
            GGGG  V LDGGGGG  SV  + GGGGG
Sbjct: 121 AGGGGLPVVLDGGGGGAPSVVFNGGGGGG 146

BLAST of MC09g1363 vs. NCBI nr
Match: XP_016900208.1 (PREDICTED: loricrin-like [Cucumis melo])

HSP 1 Score: 140 bits (354), Expect = 9.48e-39
Identity = 114/159 (71.70%), Postives = 118/159 (74.21%), Query Frame = 0

Query: 46  MLTFGGGGG--EESVPFDDGGGGGGASVPLDGGGGGGASVPLDGGGGGGVSVPLDGGGGG 105
           M+ FGGGGG  +E V  D   GGGG SV LDGGGGG  SV  DGGGGGGVSV  DGGGGG
Sbjct: 1   MVEFGGGGGGGDELVVLD---GGGGVSVVLDGGGGG-VSVVFDGGGGGGVSVVFDGGGGG 60

Query: 106 GALVPFDGGGGGGLSVPLDGGGGGGASVPLDGGGGGGVSVPLDDGGGGGVSVPLDGGGGG 165
           G  V FDGGGGGG+SV  DGGGGGG  V LDGGGGGGVSV  D GGGGGVSV  DGGGGG
Sbjct: 61  GVSVVFDGGGGGGVSVVFDGGGGGGVLVVLDGGGGGGVSVVFD-GGGGGVSVVFDGGGGG 120

Query: 166 GALVPFDGGGGGGLSVPLDGGGGGGASVPFKGGGGGGAS 202
              V  DGGGGGG+SV LDGGGGGG SV   GGGGG AS
Sbjct: 121 -VSVMLDGGGGGGVSVVLDGGGGGGVSVGLDGGGGGDAS 153

BLAST of MC09g1363 vs. NCBI nr
Match: XP_022990509.1 (glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima])

HSP 1 Score: 131 bits (329), Expect = 3.70e-35
Identity = 91/132 (68.94%), Postives = 95/132 (71.97%), Query Frame = 0

Query: 1   ITPKAIPAFCPPLSPFESAPPFSFNGSCVLGAGGGDEPTSGAGGEMLTFGGGGGEESVPF 60
           ITPK +PAFCPPLSPFESAPPFSFN S V+GAGGGDE TSG G       GGGG  SV F
Sbjct: 13  ITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA------GGGGGVSVVF 72

Query: 61  DDGGGGGGASVPLDGGGGGGASVPLDGGGGGGVSVPLDGGGGGGALVPFDGGGGGGL-SV 120
           D GGGGGG    LDGGGGGG  V LDGGGGGG+ V LDG GGGG  V  DGGGGGG  SV
Sbjct: 73  DGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSV 132

Query: 121 PLDGGGGGGASV 131
             +GGGGGG   
Sbjct: 133 VFNGGGGGGGDA 138

BLAST of MC09g1363 vs. NCBI nr
Match: XP_022957272.1 (loricrin-like [Cucurbita moschata])

HSP 1 Score: 128 bits (322), Expect = 5.49e-34
Identity = 96/142 (67.61%), Postives = 99/142 (69.72%), Query Frame = 0

Query: 1   ITPKAIPAFCPPLSPFESAPPFSFNGSCVLGAGGGDEPTSG--AGGEMLTFGGGGGEESV 60
           ITP A+PAFCPPLSPFESAPPFSFN   V GAGGGDE TSG  AGGEML  GGGGG  SV
Sbjct: 15  ITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGL-SV 74

Query: 61  PFDDGGGGGGASVPLDGGGGGGASVPLDGGGGGGVSVPLDGGGGGGALVPFDGGGGGGLS 120
            FD  GGGGG  V LDGGGGGG  V LDG GGGG+ V LDG GGGG  V  DGGGGGG  
Sbjct: 75  VFD--GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGGGGGGGG 134

Query: 121 VPLDGGGGGGASVPLDGGGGGG 140
            P         SV  +GGGGGG
Sbjct: 135 AP---------SVVFNGGGGGG 144

BLAST of MC09g1363 vs. ExPASy TrEMBL
Match: A0A1S4DW63 (loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1)

HSP 1 Score: 140 bits (354), Expect = 4.59e-39
Identity = 114/159 (71.70%), Postives = 118/159 (74.21%), Query Frame = 0

Query: 46  MLTFGGGGG--EESVPFDDGGGGGGASVPLDGGGGGGASVPLDGGGGGGVSVPLDGGGGG 105
           M+ FGGGGG  +E V  D   GGGG SV LDGGGGG  SV  DGGGGGGVSV  DGGGGG
Sbjct: 1   MVEFGGGGGGGDELVVLD---GGGGVSVVLDGGGGG-VSVVFDGGGGGGVSVVFDGGGGG 60

Query: 106 GALVPFDGGGGGGLSVPLDGGGGGGASVPLDGGGGGGVSVPLDDGGGGGVSVPLDGGGGG 165
           G  V FDGGGGGG+SV  DGGGGGG  V LDGGGGGGVSV  D GGGGGVSV  DGGGGG
Sbjct: 61  GVSVVFDGGGGGGVSVVFDGGGGGGVLVVLDGGGGGGVSVVFD-GGGGGVSVVFDGGGGG 120

Query: 166 GALVPFDGGGGGGLSVPLDGGGGGGASVPFKGGGGGGAS 202
              V  DGGGGGG+SV LDGGGGGG SV   GGGGG AS
Sbjct: 121 -VSVMLDGGGGGGVSVVLDGGGGGGVSVGLDGGGGGDAS 153

BLAST of MC09g1363 vs. ExPASy TrEMBL
Match: A0A6J1JS83 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111487352 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 1.79e-35
Identity = 91/132 (68.94%), Postives = 95/132 (71.97%), Query Frame = 0

Query: 1   ITPKAIPAFCPPLSPFESAPPFSFNGSCVLGAGGGDEPTSGAGGEMLTFGGGGGEESVPF 60
           ITPK +PAFCPPLSPFESAPPFSFN S V+GAGGGDE TSG G       GGGG  SV F
Sbjct: 13  ITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA------GGGGGVSVVF 72

Query: 61  DDGGGGGGASVPLDGGGGGGASVPLDGGGGGGVSVPLDGGGGGGALVPFDGGGGGGL-SV 120
           D GGGGGG    LDGGGGGG  V LDGGGGGG+ V LDG GGGG  V  DGGGGGG  SV
Sbjct: 73  DGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSV 132

Query: 121 PLDGGGGGGASV 131
             +GGGGGG   
Sbjct: 133 VFNGGGGGGGDA 138

BLAST of MC09g1363 vs. ExPASy TrEMBL
Match: A0A6J1GYP3 (loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 2.66e-34
Identity = 96/142 (67.61%), Postives = 99/142 (69.72%), Query Frame = 0

Query: 1   ITPKAIPAFCPPLSPFESAPPFSFNGSCVLGAGGGDEPTSG--AGGEMLTFGGGGGEESV 60
           ITP A+PAFCPPLSPFESAPPFSFN   V GAGGGDE TSG  AGGEML  GGGGG  SV
Sbjct: 15  ITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGL-SV 74

Query: 61  PFDDGGGGGGASVPLDGGGGGGASVPLDGGGGGGVSVPLDGGGGGGALVPFDGGGGGGLS 120
            FD  GGGGG  V LDGGGGGG  V LDG GGGG+ V LDG GGGG  V  DGGGGGG  
Sbjct: 75  VFD--GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGGGGGGGG 134

Query: 121 VPLDGGGGGGASVPLDGGGGGG 140
            P         SV  +GGGGGG
Sbjct: 135 AP---------SVVFNGGGGGG 144

BLAST of MC09g1363 vs. ExPASy TrEMBL
Match: A0A7I8IHU7 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_03003913 PE=4 SV=1)

HSP 1 Score: 103 bits (256), Expect = 5.66e-22
Identity = 105/202 (51.98%), Postives = 114/202 (56.44%), Query Frame = 0

Query: 31  GAGGGDEPTSGAGGEMLTFGGGGGEESVPFDDGGGGGGASVPLDGGGGGGASVPLD---- 90
           G GGG EP    GG     GGGGG    P   GGGGGG  +PL GGGGGG   P      
Sbjct: 132 GGGGGGEPIPPLGGG----GGGGGTPLPPPGGGGGGGGTPLPLPGGGGGGGGAPFPLLGG 191

Query: 91  GGGGGGVSVPLDGGGGGG--ALVPFDGGGGGG------LSVPLDGGGGGG------ASVP 150
           GGGGGG  +PL GGGGGG  A +P  GGGGGG        +PL GGGGGG      A +P
Sbjct: 192 GGGGGGAPIPLGGGGGGGGGAPIPLGGGGGGGSCGGGGAPIPLGGGGGGGSCGGGGAPIP 251

Query: 151 LDGGGGGGVSVPLDDGGGGGVSVPLDGGGGGG-------ALVPFDGGGGGG-------LS 200
           L GGGGGG       GGGGG  +PL GGGGGG       A +P  GGGGGG         
Sbjct: 252 LGGGGGGGGGG--GGGGGGGAPIPLGGGGGGGGGGGGGGAPIPLGGGGGGGGGCGGGGAP 311

BLAST of MC09g1363 vs. ExPASy TrEMBL
Match: A0A0A2VCK6 (Circumsporozoite protein OS=Beauveria bassiana D1-5 OX=1245745 GN=BBAD15_g10701 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.69e-21
Identity = 89/170 (52.35%), Postives = 103/170 (60.59%), Query Frame = 0

Query: 32  AGGGDEPTSGAGGEMLTFGGGGGEESVPFDDGGGGGGASVPLDGGGGGGASVPLDGGGGG 91
           A GG+EP +  GGE       GG E  P  +GGG GGA  P +GGG GGA  P +GGG G
Sbjct: 90  AAGGEEPPAEGGGE-------GGAE--PPAEGGGEGGAEPPAEGGGEGGAEPPAEGGGEG 149

Query: 92  GVSVPLDGGGGGGALVPFDGGGGGGLSVPLDGGGGGGASVPLDGGGGGGVSVPLDDGGGG 151
           G   P +GGG GGA  P +GGG GG   P +GGG GGA  P +GGG GG   P + GG G
Sbjct: 150 GAEPPAEGGGEGGAEPPAEGGGEGGAEPPAEGGGEGGAEPPAEGGGEGGAEPPAEGGGEG 209

Query: 152 GVSVPLDGGGGGGALVPFDGGGGGGLSVPLDGGGGGGASVPFKGGGGGGA 201
           G   P +GGG GGA  P +GGG GG   P +GGG GGA  P +GGG GGA
Sbjct: 210 GAEPPAEGGGEGGAEPPAEGGGEGGAEPPAEGGGEGGAEPPAEGGGEGGA 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_031741791.14.05e-6969.33glycine-rich protein 23-like [Cucumis sativus][more]
KAG6601160.15.36e-4071.14hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_016900208.19.48e-3971.70PREDICTED: loricrin-like [Cucumis melo][more]
XP_022990509.13.70e-3568.94glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima][more]
XP_022957272.15.49e-3467.61loricrin-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A1S4DW634.59e-3971.70loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1[more]
A0A6J1JS831.79e-3568.94glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1GYP32.66e-3467.61loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1[more]
A0A7I8IHU75.66e-2251.98Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_03003913 PE=4 SV... [more]
A0A0A2VCK66.69e-2152.35Circumsporozoite protein OS=Beauveria bassiana D1-5 OX=1245745 GN=BBAD15_g10701 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g1363.1MC09g1363.1mRNA