MC09g0901 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0901
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionproline-rich protein HaeIII subfamily 1-like
LocationMC09: 12372093 .. 12372563 (-)
RNA-Seq ExpressionMC09g0901
SyntenyMC09g0901
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAACTAGGTTGAATGAGAGGACATCAGGCTCATCACCTCCTCCACCGCATGCTCCATCTACCATTTCAAAGAAGGGATTATGGCCCTATTTTGTAATGCATCCAAAGGGAAACCTAATTCCTCCTTCTGAGCCGAGTCAAAGGTTCTCTGACTCGTCTCCTCCTCCATCAACGAAAGGATTATGGCCCTTTTTTGTAACGCATCCAAAAGGCAACCTAATTCCTCCTTCTGGACCGAGTCAAAGGTTCTCAAACTCATCACCTCCTCCACCGACGAAGGGATTATGGCCCTTTTCTGTAGTGCATCCAAAAGGTAACTTAATTTCTCCTTCTGGACCAAGTCAAAGGTTCGCGGACTCATCACCTTCTCCAACGACGAAGGGATTATGGCCATTTTTTGTAATGCATCCAAAAGGTAACCTAATTCATCCTTCTGGACCGAGTCAAAGATTCTCTGACTCATCATCTCCT

mRNA sequence

CCAACTAGGTTGAATGAGAGGACATCAGGCTCATCACCTCCTCCACCGCATGCTCCATCTACCATTTCAAAGAAGGGATTATGGCCCTATTTTGTAATGCATCCAAAGGGAAACCTAATTCCTCCTTCTGAGCCGAGTCAAAGGTTCTCTGACTCGTCTCCTCCTCCATCAACGAAAGGATTATGGCCCTTTTTTGTAACGCATCCAAAAGGCAACCTAATTCCTCCTTCTGGACCGAGTCAAAGGTTCTCAAACTCATCACCTCCTCCACCGACGAAGGGATTATGGCCCTTTTCTGTAGTGCATCCAAAAGGTAACTTAATTTCTCCTTCTGGACCAAGTCAAAGGTTCGCGGACTCATCACCTTCTCCAACGACGAAGGGATTATGGCCATTTTTTGTAATGCATCCAAAAGGTAACCTAATTCATCCTTCTGGACCGAGTCAAAGATTCTCTGACTCATCATCTCCT

Coding sequence (CDS)

CCAACTAGGTTGAATGAGAGGACATCAGGCTCATCACCTCCTCCACCGCATGCTCCATCTACCATTTCAAAGAAGGGATTATGGCCCTATTTTGTAATGCATCCAAAGGGAAACCTAATTCCTCCTTCTGAGCCGAGTCAAAGGTTCTCTGACTCGTCTCCTCCTCCATCAACGAAAGGATTATGGCCCTTTTTTGTAACGCATCCAAAAGGCAACCTAATTCCTCCTTCTGGACCGAGTCAAAGGTTCTCAAACTCATCACCTCCTCCACCGACGAAGGGATTATGGCCCTTTTCTGTAGTGCATCCAAAAGGTAACTTAATTTCTCCTTCTGGACCAAGTCAAAGGTTCGCGGACTCATCACCTTCTCCAACGACGAAGGGATTATGGCCATTTTTTGTAATGCATCCAAAAGGTAACCTAATTCATCCTTCTGGACCGAGTCAAAGATTCTCTGACTCATCATCTCCT

Protein sequence

PTRLNERTSGSSPPPPHAPSTISKKGLWPYFVMHPKGNLIPPSEPSQRFSDSSPPPSTKGLWPFFVTHPKGNLIPPSGPSQRFSNSSPPPPTKGLWPFSVVHPKGNLISPSGPSQRFADSSPSPTTKGLWPFFVMHPKGNLIHPSGPSQRFSDSSSP
Homology
BLAST of MC09g0901 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107 bits (268), Expect = 1.50e-24
Identity = 81/176 (46.02%), Postives = 89/176 (50.57%), Query Frame = 0

Query: 1   PTRLNERTSGSSPPPPHAPSTISKKGLWPYFVMHPKGNLIPPSEPSQRFSDSSPPPS--- 60
           P+  ++RTS   PPPP A S I  K     F M PKG  IPPS PSQR SD  PPP    
Sbjct: 92  PSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGPSQRTSDYPPPPPRAS 151

Query: 61  ----TKGLWPFFVTHPKGNLIPPSGPSQRFSNSSPPPP---------TKGLWPFSVVHPK 120
                K     F   PKG  IPPSGPSQR SN  PPPP         T+    F ++ PK
Sbjct: 152 SVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPLHASSVILNTQSKINFGML-PK 211

Query: 121 GNLISPSGPSQRFADSSPSPTTKGLWPF-------FVMHPKGNLIHPSGPSQRFSD 153
           G  I PSGPSQR +D  P P     +         F M PKG  I PSGPSQR SD
Sbjct: 212 GVPIPPSGPSQRTSDYPPPPPHASSFILNTQSKINFGMLPKGVPIPPSGPSQRTSD 266

BLAST of MC09g0901 vs. NCBI nr
Match: XP_010653709.1 (PREDICTED: proline-rich protein HaeIII subfamily 1-like [Vitis vinifera])

HSP 1 Score: 100 bits (249), Expect = 5.68e-23
Identity = 66/131 (50.38%), Postives = 77/131 (58.78%), Query Frame = 0

Query: 31  FVMHPKGNLIPPSEPSQRFSDSSPPPSTKGLWPF--FVTHPKGNLIPPSGPSQRFSNSSP 90
           FVM PKG+ IPPS PS R S++ PPP +    P   F   PKG  IPPSGPSQR   S P
Sbjct: 33  FVMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGVPIPPSGPSQR--TSDP 92

Query: 91  PPPTKGLWPFSVVH----PKGNLISPSGPSQRFADSSPSPTTKGLWPF--FVMHPKGNLI 150
           PPP +     SV      PKG+ I PSGPS R +++ P P +    P   F M PKG+ I
Sbjct: 93  PPPPQPFARASVFRFGMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGDPI 152

Query: 151 HPSGPSQRFSD 153
            PSGPSQR SD
Sbjct: 153 PPSGPSQRTSD 161

BLAST of MC09g0901 vs. NCBI nr
Match: RVW39818.1 (hypothetical protein CK203_074658 [Vitis vinifera])

HSP 1 Score: 100 bits (249), Expect = 6.38e-23
Identity = 66/131 (50.38%), Postives = 77/131 (58.78%), Query Frame = 0

Query: 31  FVMHPKGNLIPPSEPSQRFSDSSPPPSTKGLWPF--FVTHPKGNLIPPSGPSQRFSNSSP 90
           FVM PKG+ IPPS PS R S++ PPP +    P   F   PKG  IPPSGPSQR   S P
Sbjct: 38  FVMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGVPIPPSGPSQR--TSDP 97

Query: 91  PPPTKGLWPFSVVH----PKGNLISPSGPSQRFADSSPSPTTKGLWPF--FVMHPKGNLI 150
           PPP +     SV      PKG+ I PSGPS R +++ P P +    P   F M PKG+ I
Sbjct: 98  PPPPQPFARASVFRFGMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGDPI 157

Query: 151 HPSGPSQRFSD 153
            PSGPSQR SD
Sbjct: 158 PPSGPSQRTSD 166

BLAST of MC09g0901 vs. NCBI nr
Match: XP_004498022.1 (proline-rich protein 2-like [Cicer arietinum])

HSP 1 Score: 96.3 bits (238), Expect = 1.20e-20
Identity = 75/157 (47.77%), Postives = 91/157 (57.96%), Query Frame = 0

Query: 1   PTRLNERTSGSSPPPPHAPSTISKKGLWPYFVMHPKGNLIPPSEPSQRFSDSSPPPSTKG 60
           P+R ++ +S SSPPPPH             F +  KG+++P S PS RFSDS PPP    
Sbjct: 151 PSRPSKGSSYSSPPPPHTNLN---------FGVLLKGHVLP-SGPSTRFSDSPPPPPHTN 210

Query: 61  LWPFFVTHPKGNLIPPSGPSQRFSNSSPPPPTKGLWPFSVVHPKGNLISPSGPSQRFADS 120
           L   F   PKG  +PPSGPS RFS+S  PPP   L  F V+  KG+++ PSGPS RF+DS
Sbjct: 211 L--HFGMLPKG-YVPPSGPSTRFSDS--PPPHTNLN-FGVLL-KGHVL-PSGPSTRFSDS 270

Query: 121 SPSPTTKGLWPFFVMHPKGNLIHPSGPSQRFSDSSSP 157
            P P    L   F M PKG  + PSGPS R SDS  P
Sbjct: 271 PPPPPHTNL--HFSMLPKG-YVPPSGPSTRLSDSPPP 286

BLAST of MC09g0901 vs. NCBI nr
Match: RVW98703.1 (hypothetical protein CK203_024006 [Vitis vinifera])

HSP 1 Score: 93.2 bits (230), Expect = 1.90e-20
Identity = 66/140 (47.14%), Postives = 80/140 (57.14%), Query Frame = 0

Query: 31  FVMHPKGNLIPPSEPSQRFSDSSPPPSTKGLWPF--FVTHPKG-NLIPPSGPSQRFSNSS 90
           FVM PKG+ IPPS PS R S++ PPP +    P   F   PKG + IPPSGPS R S + 
Sbjct: 38  FVMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGGDPIPPSGPSHRGSETP 97

Query: 91  PPPPTKGLWP---FSVVHPKGNLISPSGPSQRFADSSPSPTTKGLWPF-------FVMHP 150
           PPP +    P   F ++ PKG+ I PSGPSQR +D  P P      PF       F M P
Sbjct: 98  PPPHSFARGPTLRFGML-PKGDPIPPSGPSQRTSDPPPPPQ-----PFARASVFRFGMLP 157

Query: 151 KGNLIHPSGPSQRFSDSSSP 157
           KG+ I PSGPS R S++  P
Sbjct: 158 KGDPIPPSGPSHRGSETPPP 171

BLAST of MC09g0901 vs. ExPASy TrEMBL
Match: A0A438DWZ1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_074658 PE=4 SV=1)

HSP 1 Score: 100 bits (249), Expect = 3.09e-23
Identity = 66/131 (50.38%), Postives = 77/131 (58.78%), Query Frame = 0

Query: 31  FVMHPKGNLIPPSEPSQRFSDSSPPPSTKGLWPF--FVTHPKGNLIPPSGPSQRFSNSSP 90
           FVM PKG+ IPPS PS R S++ PPP +    P   F   PKG  IPPSGPSQR   S P
Sbjct: 38  FVMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGVPIPPSGPSQR--TSDP 97

Query: 91  PPPTKGLWPFSVVH----PKGNLISPSGPSQRFADSSPSPTTKGLWPF--FVMHPKGNLI 150
           PPP +     SV      PKG+ I PSGPS R +++ P P +    P   F M PKG+ I
Sbjct: 98  PPPPQPFARASVFRFGMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGDPI 157

Query: 151 HPSGPSQRFSD 153
            PSGPSQR SD
Sbjct: 158 PPSGPSQRTSD 166

BLAST of MC09g0901 vs. ExPASy TrEMBL
Match: A0A1S2Y3N8 (proline-rich protein 2-like OS=Cicer arietinum OX=3827 GN=LOC101510047 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.81e-21
Identity = 75/157 (47.77%), Postives = 91/157 (57.96%), Query Frame = 0

Query: 1   PTRLNERTSGSSPPPPHAPSTISKKGLWPYFVMHPKGNLIPPSEPSQRFSDSSPPPSTKG 60
           P+R ++ +S SSPPPPH             F +  KG+++P S PS RFSDS PPP    
Sbjct: 151 PSRPSKGSSYSSPPPPHTNLN---------FGVLLKGHVLP-SGPSTRFSDSPPPPPHTN 210

Query: 61  LWPFFVTHPKGNLIPPSGPSQRFSNSSPPPPTKGLWPFSVVHPKGNLISPSGPSQRFADS 120
           L   F   PKG  +PPSGPS RFS+S  PPP   L  F V+  KG+++ PSGPS RF+DS
Sbjct: 211 L--HFGMLPKG-YVPPSGPSTRFSDS--PPPHTNLN-FGVLL-KGHVL-PSGPSTRFSDS 270

Query: 121 SPSPTTKGLWPFFVMHPKGNLIHPSGPSQRFSDSSSP 157
            P P    L   F M PKG  + PSGPS R SDS  P
Sbjct: 271 PPPPPHTNL--HFSMLPKG-YVPPSGPSTRLSDSPPP 286

BLAST of MC09g0901 vs. ExPASy TrEMBL
Match: A0A438IPQ7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_024006 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.18e-21
Identity = 66/140 (47.14%), Postives = 80/140 (57.14%), Query Frame = 0

Query: 31  FVMHPKGNLIPPSEPSQRFSDSSPPPSTKGLWPF--FVTHPKG-NLIPPSGPSQRFSNSS 90
           FVM PKG+ IPPS PS R S++ PPP +    P   F   PKG + IPPSGPS R S + 
Sbjct: 38  FVMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGGDPIPPSGPSHRGSETP 97

Query: 91  PPPPTKGLWP---FSVVHPKGNLISPSGPSQRFADSSPSPTTKGLWPF-------FVMHP 150
           PPP +    P   F ++ PKG+ I PSGPSQR +D  P P      PF       F M P
Sbjct: 98  PPPHSFARGPTLRFGML-PKGDPIPPSGPSQRTSDPPPPPQ-----PFARASVFRFGMLP 157

Query: 151 KGNLIHPSGPSQRFSDSSSP 157
           KG+ I PSGPS R S++  P
Sbjct: 158 KGDPIPPSGPSHRGSETPPP 171

BLAST of MC09g0901 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.06e-19
Identity = 75/170 (44.12%), Postives = 85/170 (50.00%), Query Frame = 0

Query: 1   PTRLNERTSGSSPPPPHAPSTISKKGLWPYFVMHPKGNLIPPSEPSQRFSDSSPPPS--- 60
           P+  ++RTS   PPPPHA S I  K     F M PKG  IPPS PSQR S   PPP    
Sbjct: 293 PSGPSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRAS 352

Query: 61  ----TKGLWPFFVTHPKGNLIPPSGPSQRFSNSSPPPP--------TKGLWPFSVVHPKG 120
                K    +    P+G  IPP G SQR S+   PPP         +    F ++ PKG
Sbjct: 353 SVILNKQSKIYLGMLPRGVPIPPPGLSQRTSDYPHPPPHASSVILNKQSKINFGML-PKG 412

Query: 121 NLISPSGPSQRFADSSPSPTTKGLWPF--FVMHPKGNLIHPSGPSQRFSD 153
             I PSGPS R +D  P P    LWP   F M PK   I PSGPSQR SD
Sbjct: 413 VPIPPSGPSHRTSDYPPPPPHV-LWPKINFGMLPKDVPIPPSGPSQRTSD 460

BLAST of MC09g0901 vs. ExPASy TrEMBL
Match: A0A6J5XM21 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.10e-19
Identity = 72/153 (47.06%), Postives = 80/153 (52.29%), Query Frame = 0

Query: 4   LNERTSGSSPPPPHAPSTISKKGLWPYFVMHPKGNLIPPSEPSQRFSDSSPPPSTKGLWP 63
           LN R + SS  PP  P+T + +     F   PKG LIPPS PS+R S   PPP      P
Sbjct: 37  LNFRKAASSRVPPTGPNTGTSRKF--NFGTLPKGTLIPPSWPSKRTSRPPPPPPQ----P 96

Query: 64  F-FVTHPKGNLIPPSGPSQRFSNSSPPPPTKGLWPFSV-VHPKGNLISPSGPSQRFADSS 123
           F F T PK   IPPSGPS R S+  PPPP     PF+    PK   I PSGPS R +D  
Sbjct: 97  FNFGTLPKYTPIPPSGPSGRTSDPPPPPP-----PFNFGTLPKYTPIPPSGPSGRTSDPP 156

Query: 124 PSPTTKGLWPF-FVMHPKGNLIHPSGPSQRFSD 153
           P P      PF F   PK   I PSGPS R SD
Sbjct: 157 PPPPP----PFNFGTLPKYTPIPPSGPSGRTSD 174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6603169.11.50e-2446.02hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_010653709.15.68e-2350.38PREDICTED: proline-rich protein HaeIII subfamily 1-like [Vitis vinifera][more]
RVW39818.16.38e-2350.38hypothetical protein CK203_074658 [Vitis vinifera][more]
XP_004498022.11.20e-2047.77proline-rich protein 2-like [Cicer arietinum][more]
RVW98703.11.90e-2047.14hypothetical protein CK203_024006 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
A0A438DWZ13.09e-2350.38Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_074658 PE=4 SV=1[more]
A0A1S2Y3N85.81e-2147.77proline-rich protein 2-like OS=Cicer arietinum OX=3827 GN=LOC101510047 PE=4 SV=1[more]
A0A438IPQ79.18e-2147.14Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_024006 PE=4 SV=1[more]
A0A6J1HRH71.06e-1944.12actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... [more]
A0A6J5XM216.10e-1947.06Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..124
NoneNo IPR availablePANTHERPTHR33599:SF13FORMIN-LIKE PROTEIN 20coord: 31..92
coord: 101..157
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 101..157
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 31..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0901.1MC09g0901.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010227 floral organ abscission