MC09g0681 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0681
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	methyl-CpG-binding domain-containing protein 4-like
Location	MC09: 6223614 .. 6224123 (+)
RNA-Seq Expression	MC09g0681
Synteny	MC09g0681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGTTTCTCTTTGCAGTCAAAAAGGCTGCCGGTAGATCTATATGCTGCACAATGTGAGGAATGCTTCAAGTGGAGGTTGATAAGTACCCAAGAGGAGTATGAGGATATTAGAAGTAAACTGATAGAAGAACCCTTTACTTGCAATAGGAAAACTGATACTTCTTGTGAGGACGCGTCCGATATCGACTATGATGCAACTCGAACTTGGGTGATCGACAAACCTAACATCCCAAAGACCCCAGAAGGTTTCAAGAGACGTCTGGTGCTAAGAAAGGATTTCTCTAAATTTGATGCTTACTATATCACACCGACTGGGAAGACGGTGAGATCCTCTACCGAGATGCTATCCTTCATAGAAGCAAATCCAAAATACAAGGATATACCTCTTTCAAAGTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTAAGAGAGGATTTAAGTAGCAGTAGTGCCAAAAGAATTAAAAAGGTTAAGGATAAATCTGCC

mRNA sequence

ATTGGTTTCTCTTTGCAGTCAAAAAGGCTGCCGGTAGATCTATATGCTGCACAATGTGAGGAATGCTTCAAGTGGAGGTTGATAAGTACCCAAGAGGAGTATGAGGATATTAGAAGTAAACTGATAGAAGAACCCTTTACTTGCAATAGGAAAACTGATACTTCTTGTGAGGACGCGTCCGATATCGACTATGATGCAACTCGAACTTGGGTGATCGACAAACCTAACATCCCAAAGACCCCAGAAGGTTTCAAGAGACGTCTGGTGCTAAGAAAGGATTTCTCTAAATTTGATGCTTACTATATCACACCGACTGGGAAGACGGTGAGATCCTCTACCGAGATGCTATCCTTCATAGAAGCAAATCCAAAATACAAGGATATACCTCTTTCAAAGTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTAAGAGAGGATTTAAGTAGCAGTAGTGCCAAAAGAATTAAAAAGGTTAAGGATAAATCTGCC

Coding sequence (CDS)

ATTGGTTTCTCTTTGCAGTCAAAAAGGCTGCCGGTAGATCTATATGCTGCACAATGTGAGGAATGCTTCAAGTGGAGGTTGATAAGTACCCAAGAGGAGTATGAGGATATTAGAAGTAAACTGATAGAAGAACCCTTTACTTGCAATAGGAAAACTGATACTTCTTGTGAGGACGCGTCCGATATCGACTATGATGCAACTCGAACTTGGGTGATCGACAAACCTAACATCCCAAAGACCCCAGAAGGTTTCAAGAGACGTCTGGTGCTAAGAAAGGATTTCTCTAAATTTGATGCTTACTATATCACACCGACTGGGAAGACGGTGAGATCCTCTACCGAGATGCTATCCTTCATAGAAGCAAATCCAAAATACAAGGATATACCTCTTTCAAAGTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTAAGAGAGGATTTAAGTAGCAGTAGTGCCAAAAGAATTAAAAAGGTTAAGGATAAATCTGCC

Protein sequence

IGFSLQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDYDATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPKYKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA

Homology

[Close]

BLAST of MC09g0681 vs. ExPASy Swiss-Prot
Match: Q9LYB9 (Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=MBD4 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-51
Identity = 87/135 (64.44%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDYDATRTWV 71
           +D YAAQC+ C KWR+I +QEEYEDIRSK++E+PF C +K   SCE+ +DIDYD++RTWV
Sbjct: 25  IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADIDYDSSRTWV 84

Query: 72  IDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPKYKDIPLS 131
           IDKP +PKTP+GFKR LVLRKD+SK D YY TPTGK +RS  E+ +F+EANP++++ PL 
Sbjct: 85  IDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPEFRNAPLG 144

Query: 132 KFSFAVPKVMEETVP 147
            F+F VPKVME+TVP
Sbjct: 145 DFNFTVPKVMEDTVP 159

[Close]

BLAST of MC09g0681 vs. ExPASy Swiss-Prot
Match: Q5XEN5 (Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBD1 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.2e-48
Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDYDATRTWV 71
           +D++A QCE+C KWR I TQ+EYEDIRS++ E+PF C  K   SCED  D++YD++RTWV
Sbjct: 52  IDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSSRTWV 111

Query: 72  IDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPKYKDIPLS 131
           IDKP +P+TP GFKR L+LRKD+SK DAYYITPTGK ++S  E+ +FI+AN  YK   L 
Sbjct: 112 IDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNEIAAFIDANQDYKYALLG 171

Query: 132 KFSFAVPKVMEETVPESILREDLSSSSAK 161
            F+F VPKVMEETVP  IL +     S K
Sbjct: 172 DFNFTVPKVMEETVPSGILSDRTPKPSRK 200

[Close]

BLAST of MC09g0681 vs. ExPASy Swiss-Prot
Match: Q8LA53 (Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=MBD2 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.8e-26
Identity = 57/140 (40.71%), Postives = 91/140 (65.00%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNR----KTDTSCEDASDIDYDAT 71
           +  +  QC  CFKWRL+ + ++YE+IR +L+E PF C+     K D SC+  +DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 72  RTWVIDKPNIPKTPEGFKRRLVLR-KDFSKF-DAYYITPTGKTVRSSTEMLSFIEANPKY 131
           R W IDKPNI + P G++R L +R +  ++F D YY+ P+GK +RS+ E+  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 132 --KDIPLSKFSFAVPKVMEE 144
             + + LS+FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

[Close]

BLAST of MC09g0681 vs. ExPASy Swiss-Prot
Match: Q4PSK1 (Methyl-CpG-binding domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=MBD3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-22
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASD--IDYDA-TR 71
           +D YAAQC +C K R I +QE+YE+IRSK +E+ F C R     CE+  D  +++D+ T 
Sbjct: 9   IDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSLTM 68

Query: 72  TWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYY--ITPTGKTVRSSTEMLSFIEANPKYK 131
            W  D+ +IPKTP+G KR LV+R +  K D YY  + P  K  +S  E+ +FIE   ++K
Sbjct: 69  RWFQDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEEFK 128

Query: 132 DIPLSKFSFAVPK 140
           D+ L + SFA PK
Sbjct: 129 DMTLEEVSFAAPK 136

[Close]

BLAST of MC09g0681 vs. ExPASy Swiss-Prot
Match: Q9FZP6 (Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN=MBD12 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-16
Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 18  QCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDYDATR--TWVIDKP 77
           QC +C KWRLI + + Y  I+   ++ PF C   +  +   + ++  D T   TW    P
Sbjct: 3   QCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGTTCDTW----P 62

Query: 78  NIPKTPEGFKRRLVLRKDFSKF-DAYYITPTGKTVRSSTEMLSFIEANPKY--KDIPLSK 137
           +IP  P G+ R + +R + +KF D YY  P+G+ +RSS E+ SF++ +P+Y  + +  S+
Sbjct: 63  SIPPIPTGWSRSVHIRSESTKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGVNRSQ 122

Query: 138 FSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKS 170
           FSF +PK +++   +   R        KR K  KD +
Sbjct: 123 FSFQIPKPLDDNYVKKRTR------PVKRRKSSKDNN 149

[Close]

BLAST of MC09g0681 vs. NCBI nr
Match: XP_022150154.1 (methyl-CpG-binding domain-containing protein 4-like [Momordica charantia])

HSP 1 Score: 329 bits (843), Expect = 7.02e-113
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 5   LQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 64
           ++SKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY
Sbjct: 36  VKSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 95

Query: 65  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 124
           DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK
Sbjct: 96  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 155

Query: 125 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA
Sbjct: 156 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 201

[Close]

BLAST of MC09g0681 vs. NCBI nr
Match: XP_038896997.1 (methyl-CpG-binding domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 288 bits (736), Expect = 1.62e-96
Identity = 140/166 (84.34%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 5   LQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 64
           ++S RLPV L+AAQCEECFKWRLISTQEEYEDIRSK+IEEPFTC RKTDTSC++  DIDY
Sbjct: 40  VKSARLPVGLFAAQCEECFKWRLISTQEEYEDIRSKMIEEPFTCPRKTDTSCDNPPDIDY 99

Query: 65  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 124
           D TRTW IDKPNIPKTP GF RRLVLRK+FSKFDAYY+TPTGKTVRSSTEML+F+EANP+
Sbjct: 100 DTTRTWGIDKPNIPKTPHGFTRRLVLRKNFSKFDAYYVTPTGKTVRSSTEMLAFVEANPE 159

Query: 125 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           YKDIPLS FSFAVPKVMEETVPESIL+E L+SSSAKRIKK KD+SA
Sbjct: 160 YKDIPLSSFSFAVPKVMEETVPESILKEGLNSSSAKRIKKTKDESA 205

[Close]

BLAST of MC09g0681 vs. NCBI nr
Match: XP_004148873.1 (methyl-CpG-binding domain-containing protein 4 [Cucumis sativus] >KGN44852.1 hypothetical protein Csa_016159 [Cucumis sativus])

HSP 1 Score: 282 bits (722), Expect = 8.71e-95
Identity = 137/165 (83.03%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 6   QSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDYD 65
           +S RLPV L+AAQCEECFKWRLISTQEEYE IRSK+IEEPFTC RKTDTSCED  DIDYD
Sbjct: 14  KSTRLPVGLFAAQCEECFKWRLISTQEEYEGIRSKIIEEPFTCQRKTDTSCEDPPDIDYD 73

Query: 66  ATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPKY 125
            TRTW IDKPNIPKTPEGF RRLVLRK+F+KFDAYY+TPTGKTVRSSTE+L+F+EANP+Y
Sbjct: 74  TTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSSTEVLAFVEANPQY 133

Query: 126 KDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           KDI LS FSFAVPK+MEETVPESIL+E L+SSSAKRIKK K++SA
Sbjct: 134 KDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNESA 178

[Close]

BLAST of MC09g0681 vs. NCBI nr
Match: KAA0057559.1 (methyl-CpG-binding domain-containing protein 4 [Cucumis melo var. makuwa] >TYK18280.1 methyl-CpG-binding domain-containing protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 277 bits (709), Expect = 8.05e-93
Identity = 132/166 (79.52%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 5   LQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 64
           ++S R+PV L+AAQCEECFKWRLISTQEEYEDIRS++IEEPFTC R+TDTSCED  DI+Y
Sbjct: 12  IKSTRVPVGLFAAQCEECFKWRLISTQEEYEDIRSRMIEEPFTCQRRTDTSCEDPPDINY 71

Query: 65  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 124
           D TRTW IDKPNIPKTPEGF RRLVLRK+F+KFDAYY+TPTGKTVRS TE+L+F++ANP+
Sbjct: 72  DTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSPTEILAFVQANPQ 131

Query: 125 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           YKDI LS FSFAVPK+MEETVPESIL+E L+SSSAKRIKK K++SA
Sbjct: 132 YKDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNESA 177

[Close]

BLAST of MC09g0681 vs. NCBI nr
Match: XP_008451407.1 (PREDICTED: methyl-CpG-binding domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 277 bits (709), Expect = 8.05e-93
Identity = 132/166 (79.52%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 5   LQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 64
           ++S R+PV L+A QCEECFKWRLISTQEEYEDIRS++IEEPFTC RKTDTSCED  DI+Y
Sbjct: 12  IKSTRVPVSLFAVQCEECFKWRLISTQEEYEDIRSRMIEEPFTCQRKTDTSCEDPPDINY 71

Query: 65  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 124
           D TRTW IDKPNIPKTPEGF RRLVLRK+F+KFDAYY+TPTGKTVRS TE+L+F++ANP+
Sbjct: 72  DTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSPTEILAFVQANPQ 131

Query: 125 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           YKDI LS FSFAVPK+MEETVPESIL+E L+SSSAKRIKK K++SA
Sbjct: 132 YKDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNESA 177

[Close]

BLAST of MC09g0681 vs. ExPASy TrEMBL
Match: A0A6J1D952 (methyl-CpG-binding domain-containing protein 4-like OS=Momordica charantia OX=3673 GN=LOC111018404 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 3.40e-113
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 5   LQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 64
           ++SKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY
Sbjct: 36  VKSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 95

Query: 65  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 124
           DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK
Sbjct: 96  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 155

Query: 125 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA
Sbjct: 156 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 201

[Close]

BLAST of MC09g0681 vs. ExPASy TrEMBL
Match: A0A0A0K900 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391290 PE=4 SV=1)

HSP 1 Score: 282 bits (722), Expect = 4.22e-95
Identity = 137/165 (83.03%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 6   QSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDYD 65
           +S RLPV L+AAQCEECFKWRLISTQEEYE IRSK+IEEPFTC RKTDTSCED  DIDYD
Sbjct: 14  KSTRLPVGLFAAQCEECFKWRLISTQEEYEGIRSKIIEEPFTCQRKTDTSCEDPPDIDYD 73

Query: 66  ATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPKY 125
            TRTW IDKPNIPKTPEGF RRLVLRK+F+KFDAYY+TPTGKTVRSSTE+L+F+EANP+Y
Sbjct: 74  TTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSSTEVLAFVEANPQY 133

Query: 126 KDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           KDI LS FSFAVPK+MEETVPESIL+E L+SSSAKRIKK K++SA
Sbjct: 134 KDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNESA 178

[Close]

BLAST of MC09g0681 vs. ExPASy TrEMBL
Match: A0A5A7UVI7 (Methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002230 PE=4 SV=1)

HSP 1 Score: 277 bits (709), Expect = 3.90e-93
Identity = 132/166 (79.52%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 5   LQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 64
           ++S R+PV L+AAQCEECFKWRLISTQEEYEDIRS++IEEPFTC R+TDTSCED  DI+Y
Sbjct: 12  IKSTRVPVGLFAAQCEECFKWRLISTQEEYEDIRSRMIEEPFTCQRRTDTSCEDPPDINY 71

Query: 65  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 124
           D TRTW IDKPNIPKTPEGF RRLVLRK+F+KFDAYY+TPTGKTVRS TE+L+F++ANP+
Sbjct: 72  DTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSPTEILAFVQANPQ 131

Query: 125 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           YKDI LS FSFAVPK+MEETVPESIL+E L+SSSAKRIKK K++SA
Sbjct: 132 YKDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNESA 177

[Close]

BLAST of MC09g0681 vs. ExPASy TrEMBL
Match: A0A1S3BRE2 (methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103492710 PE=4 SV=1)

HSP 1 Score: 277 bits (709), Expect = 3.90e-93
Identity = 132/166 (79.52%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 5   LQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 64
           ++S R+PV L+A QCEECFKWRLISTQEEYEDIRS++IEEPFTC RKTDTSCED  DI+Y
Sbjct: 12  IKSTRVPVSLFAVQCEECFKWRLISTQEEYEDIRSRMIEEPFTCQRKTDTSCEDPPDINY 71

Query: 65  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 124
           D TRTW IDKPNIPKTPEGF RRLVLRK+F+KFDAYY+TPTGKTVRS TE+L+F++ANP+
Sbjct: 72  DTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSPTEILAFVQANPQ 131

Query: 125 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           YKDI LS FSFAVPK+MEETVPESIL+E L+SSSAKRIKK K++SA
Sbjct: 132 YKDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNESA 177

[Close]

BLAST of MC09g0681 vs. ExPASy TrEMBL
Match: A0A6J1GNJ9 (methyl-CpG-binding domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111456046 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 6.23e-92
Identity = 131/166 (78.92%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 5   LQSKRLPVDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDY 64
           ++S RLPV LYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTC+RKTDTSC+D  DI+Y
Sbjct: 11  MKSTRLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKTDTSCKDPPDIEY 70

Query: 65  DATRTWVIDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPK 124
           DATRTW IDKPNIPKTPEGF R LV+RK+FSKFDAYY+TPTGKTVRS TEM +F+ ANP+
Sbjct: 71  DATRTWGIDKPNIPKTPEGFTRHLVVRKNFSKFDAYYVTPTGKTVRSPTEMQAFLGANPR 130

Query: 125 YKDIPLSKFSFAVPKVMEETVPESILREDLSSSSAKRIKKVKDKSA 170
           +KD+PL+ FSF +P++MEETVPESIL+E L SSSAKRIKK KD+ A
Sbjct: 131 HKDVPLTDFSFTIPRLMEETVPESILKEGLDSSSAKRIKKTKDEFA 176

[Close]

BLAST of MC09g0681 vs. TAIR 10
Match: AT3G63030.1 (methyl-CPG-binding domain 4 )

HSP 1 Score: 203.4 bits (516), Expect = 1.5e-52
Identity = 87/135 (64.44%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDYDATRTWV 71
           +D YAAQC+ C KWR+I +QEEYEDIRSK++E+PF C +K   SCE+ +DIDYD++RTWV
Sbjct: 25  IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADIDYDSSRTWV 84

Query: 72  IDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPKYKDIPLS 131
           IDKP +PKTP+GFKR LVLRKD+SK D YY TPTGK +RS  E+ +F+EANP++++ PL 
Sbjct: 85  IDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPEFRNAPLG 144

Query: 132 KFSFAVPKVMEETVP 147
            F+F VPKVME+TVP
Sbjct: 145 DFNFTVPKVMEDTVP 159

[Close]

BLAST of MC09g0681 vs. TAIR 10
Match: AT4G22745.1 (methyl-CPG-binding domain 1 )

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-49
Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNRKTDTSCEDASDIDYDATRTWV 71
           +D++A QCE+C KWR I TQ+EYEDIRS++ E+PF C  K   SCED  D++YD++RTWV
Sbjct: 52  IDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSSRTWV 111

Query: 72  IDKPNIPKTPEGFKRRLVLRKDFSKFDAYYITPTGKTVRSSTEMLSFIEANPKYKDIPLS 131
           IDKP +P+TP GFKR L+LRKD+SK DAYYITPTGK ++S  E+ +FI+AN  YK   L 
Sbjct: 112 IDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNEIAAFIDANQDYKYALLG 171

Query: 132 KFSFAVPKVMEETVPESILREDLSSSSAK 161
            F+F VPKVMEETVP  IL +     S K
Sbjct: 172 DFNFTVPKVMEETVPSGILSDRTPKPSRK 200

[Close]

BLAST of MC09g0681 vs. TAIR 10
Match: AT5G35330.1 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 118.2 bits (295), Expect = 6.3e-27
Identity = 57/140 (40.71%), Postives = 91/140 (65.00%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNR----KTDTSCEDASDIDYDAT 71
           +  +  QC  CFKWRL+ + ++YE+IR +L+E PF C+     K D SC+  +DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 72  RTWVIDKPNIPKTPEGFKRRLVLR-KDFSKF-DAYYITPTGKTVRSSTEMLSFIEANPKY 131
           R W IDKPNI + P G++R L +R +  ++F D YY+ P+GK +RS+ E+  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 132 --KDIPLSKFSFAVPKVMEE 144
             + + LS+FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

[Close]

BLAST of MC09g0681 vs. TAIR 10
Match: AT5G35330.2 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 118.2 bits (295), Expect = 6.3e-27
Identity = 57/140 (40.71%), Postives = 91/140 (65.00%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNR----KTDTSCEDASDIDYDAT 71
           +  +  QC  CFKWRL+ + ++YE+IR +L+E PF C+     K D SC+  +DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 72  RTWVIDKPNIPKTPEGFKRRLVLR-KDFSKF-DAYYITPTGKTVRSSTEMLSFIEANPKY 131
           R W IDKPNI + P G++R L +R +  ++F D YY+ P+GK +RS+ E+  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 132 --KDIPLSKFSFAVPKVMEE 144
             + + LS+FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

[Close]

BLAST of MC09g0681 vs. TAIR 10
Match: AT5G35330.3 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 118.2 bits (295), Expect = 6.3e-27
Identity = 57/140 (40.71%), Postives = 91/140 (65.00%), Query Frame = 0


Query: 12  VDLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCNR----KTDTSCEDASDIDYDAT 71
           +  +  QC  CFKWRL+ + ++YE+IR +L+E PF C+     K D SC+  +DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 72  RTWVIDKPNIPKTPEGFKRRLVLR-KDFSKF-DAYYITPTGKTVRSSTEMLSFIEANPKY 131
           R W IDKPNI + P G++R L +R +  ++F D YY+ P+GK +RS+ E+  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 132 --KDIPLSKFSFAVPKVMEE 144
             + + LS+FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

The following BLAST results are available for this feature:

BLAST of MC09g0681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYB9	2.1e-51	64.44	Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q5XEN5	2.2e-48	59.06	Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q8LA53	8.8e-26	40.71	Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q4PSK1	2.0e-22	44.36	Methyl-CpG-binding domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FZP6	3.7e-16	32.48	Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of MC09g0681 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150154.1	7.02e-113	98.80	methyl-CpG-binding domain-containing protein 4-like [Momordica charantia]	[more]
XP_038896997.1	1.62e-96	84.34	methyl-CpG-binding domain-containing protein 4-like [Benincasa hispida]	[more]
XP_004148873.1	8.71e-95	83.03	methyl-CpG-binding domain-containing protein 4 [Cucumis sativus] >KGN44852.1 hyp...	[more]
KAA0057559.1	8.05e-93	79.52	methyl-CpG-binding domain-containing protein 4 [Cucumis melo var. makuwa] >TYK18...	[more]
XP_008451407.1	8.05e-93	79.52	PREDICTED: methyl-CpG-binding domain-containing protein 4 [Cucumis melo]	[more]

BLAST of MC09g0681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D952	3.40e-113	98.80	methyl-CpG-binding domain-containing protein 4-like OS=Momordica charantia OX=36...	[more]
A0A0A0K900	4.22e-95	83.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391290 PE=4 SV=1	[more]
A0A5A7UVI7	3.90e-93	79.52	Methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BRE2	3.90e-93	79.52	methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1GNJ9	6.23e-92	78.92	methyl-CpG-binding domain-containing protein 4-like OS=Cucurbita moschata OX=366...	[more]

BLAST of MC09g0681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63030.1	1.5e-52	64.44	methyl-CPG-binding domain 4	[more]
AT4G22745.1	1.5e-49	59.06	methyl-CPG-binding domain 1	[more]
AT5G35330.1	6.3e-27	40.71	methyl-CPG-binding domain protein 02	[more]
AT5G35330.2	6.3e-27	40.71	methyl-CPG-binding domain protein 02	[more]
AT5G35330.3	6.3e-27	40.71	methyl-CPG-binding domain protein 02	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	SMART	SM00391	TAM_2	coord: 72..145 e-value: 1.3E-12 score: 57.9
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 79..141 e-value: 1.1E-11 score: 44.3
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 70..140 score: 13.705567
None	No IPR available	GENE3D	3.30.890.10		coord: 72..146 e-value: 7.1E-14 score: 53.4
None	No IPR available	GENE3D	3.30.40.100		coord: 12..65 e-value: 2.6E-6 score: 28.8
None	No IPR available	PANTHER	PTHR12396:SF10	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 11..167
None	No IPR available	PANTHER	PTHR12396	METHYL-CPG BINDING PROTEIN, MBD	coord: 11..167
None	No IPR available	CDD	cd01396	MeCP2_MBD	coord: 74..146 e-value: 1.08811E-18 score: 73.9461
IPR011124	Zinc finger, CW-type	PFAM	PF07496	zf-CW	coord: 15..61 e-value: 2.0E-10 score: 40.5
IPR011124	Zinc finger, CW-type	PROSITE	PS51050	ZF_CW	coord: 9..64 score: 11.574518
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 52..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0681.1	MC09g0681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding