MC09g0649 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0649
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
LocationMC09: 5925792 .. 5926118 (+)
RNA-Seq ExpressionMC09g0649
SyntenyMC09g0649
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCGATCAAATCCCTAGTACTTCCGATACCCCTACTCGCTCTTCTCCTGCTCTCCCAATCCCTAGCCGCCGATCACGGCGGGGATTCGAATTCCTCCACCGGAATGCTTCGCCCGAACAACGTCCTTCAGACCGCTGCGGAGGACCATCGGCTTCCAAAGAGCGACGGCGAGCTCTCCTTCGAGCGAAAAATCAGAAGGCGGACCCGACGATCCGTAGTAAGAGCCGATGGTCCGAGCCCGTCGGCGGCGAATCGGGGCCCAACGTCGTCGTTTGGCGTTGGATCTCTACTCTGTCTCTGTATTGTTCTTGGTTTGTTCGTG

mRNA sequence

ATGGCTGCGATCAAATCCCTAGTACTTCCGATACCCCTACTCGCTCTTCTCCTGCTCTCCCAATCCCTAGCCGCCGATCACGGCGGGGATTCGAATTCCTCCACCGGAATGCTTCGCCCGAACAACGTCCTTCAGACCGCTGCGGAGGACCATCGGCTTCCAAAGAGCGACGGCGAGCTCTCCTTCGAGCGAAAAATCAGAAGGCGGACCCGACGATCCGTAGTAAGAGCCGATGGTCCGAGCCCGTCGGCGGCGAATCGGGGCCCAACGTCGTCGTTTGGCGTTGGATCTCTACTCTGTCTCTGTATTGTTCTTGGTTTGTTCGTG

Coding sequence (CDS)

ATGGCTGCGATCAAATCCCTAGTACTTCCGATACCCCTACTCGCTCTTCTCCTGCTCTCCCAATCCCTAGCCGCCGATCACGGCGGGGATTCGAATTCCTCCACCGGAATGCTTCGCCCGAACAACGTCCTTCAGACCGCTGCGGAGGACCATCGGCTTCCAAAGAGCGACGGCGAGCTCTCCTTCGAGCGAAAAATCAGAAGGCGGACCCGACGATCCGTAGTAAGAGCCGATGGTCCGAGCCCGTCGGCGGCGAATCGGGGCCCAACGTCGTCGTTTGGCGTTGGATCTCTACTCTGTCTCTGTATTGTTCTTGGTTTGTTCGTG

Protein sequence

MAAIKSLVLPIPLLALLLLSQSLAADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSDGELSFERKIRRRTRRSVVRADGPSPSAANRGPTSSFGVGSLLCLCIVLGLFV
Homology
BLAST of MC09g0649 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 92.0 bits (227), Expect = 9.07e-21
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSL---AADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSD 60
           MA IKSL+  I LLALLLL + L   AADHG   +   G+ R +  LQTA E H++ ++ 
Sbjct: 63  MAPIKSLI-SIALLALLLLFERLPISAADHGVAPSPLAGVFRLD-TLQTA-ERHQVAENG 122

Query: 61  --GELSFERKIRRRTRRSVVRADGPSPSAANRGPTSSFGVGSLLCLCIVLGLF 108
              + SFE+KIRRR RR+V RA+GPSPS+AN   TSSFGVGSLLCLC V GLF
Sbjct: 123 IGNQYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCTVFGLF 172

BLAST of MC09g0649 vs. NCBI nr
Match: XP_022954099.1 (uncharacterized protein LOC111456466 [Cucurbita moschata])

HSP 1 Score: 91.3 bits (225), Expect = 3.39e-20
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSL---AADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSD 60
           MA IKSL+  I LLALLLLS+ L   AADHG   +    + R  + LQTA E H++ ++ 
Sbjct: 90  MAPIKSLI-SIALLALLLLSEHLPISAADHGVAPSPLARVFR-RDTLQTA-ERHQVAENG 149

Query: 61  --GELSFERKIRRRTRRSVVRADGPSPSAANRGPTSSFGVGSLLCLCIVLGLF 108
              + SFE+KIRRR RR+V RA+GPSPS+AN   TSSFGVGSLLCLC V GLF
Sbjct: 150 IGYQYSFEQKIRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCTVFGLF 199

BLAST of MC09g0649 vs. NCBI nr
Match: KAG6575858.1 (hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.0 bits (214), Expect = 1.07e-18
Identity = 61/107 (57.01%), Postives = 76/107 (71.03%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSL---AADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSD 60
           MA IKSL+  I LLALLLLS+ L   AADHG   +   G+ R  + LQTA E H++ ++ 
Sbjct: 1   MAPIKSLI-SIALLALLLLSEHLPISAADHGVAPSPLAGVFR-RDTLQTA-ERHQVAENG 60

Query: 61  --GELSFERKIRRRTRRSVVRADGPSPSAANRGPTSSFGVGSLLCLC 102
              + SFE+KIRRR RR+V RA+GPSPS+AN   TSSFG+GSLLCLC
Sbjct: 61  IGYQYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLC 104

BLAST of MC09g0649 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.0 bits (175), Expect = 1.15e-13
Identity = 62/114 (54.39%), Postives = 73/114 (64.04%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSLAA---DHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSD 60
           MAA+KSLV  + LLALLL S+SL A   D  GDSNS TGMLR  NVLQTAA  H++  + 
Sbjct: 1   MAALKSLV-SVALLALLLFSESLTASAVDRSGDSNSLTGMLR-RNVLQTAA--HQIADNS 60

Query: 61  GELSFERKIR---RRTRRSVVRADGPSPSAANRGPTSSFGVGSLLCLCIVLGLF 108
            E S ERK+    +R  R V  A G   SAANR   +S GVGS+L   +VLGLF
Sbjct: 61  VESSPERKMNVHIKRRMRPV--ATGTRSSAANRSRIASIGVGSVL---VVLGLF 105

BLAST of MC09g0649 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.8 bits (164), Expect = 5.25e-12
Identity = 52/111 (46.85%), Postives = 67/111 (60.36%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSL---AADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSD 60
           MAAIK+L L I L+ALLL  +SL   AA H G S S  G+LR  N++QT A+ H++    
Sbjct: 1   MAAIKAL-LSIALIALLLFFESLPTSAAVHRGASTSLAGILR-RNIVQTTADHHQV---- 60

Query: 61  GELSFERKIRRRTRRSVVRADGPSPSAANRGPTSSFGVGSLLCLCIVLGLF 108
            E  F   I+RR R   V    P  SAANR   +  GVGS+LC+ ++LGLF
Sbjct: 61  AEKKFNVHIKRRMRMRPVLIGRPKTSAANRSREAFCGVGSMLCIFVLLGLF 105

BLAST of MC09g0649 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.39e-21
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSL---AADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSD 60
           MA IKSL+  I LLALLLL + L   AADHG   +   G+ R +  LQTA E H++ ++ 
Sbjct: 63  MAPIKSLI-SIALLALLLLFERLPISAADHGVAPSPLAGVFRLD-TLQTA-ERHQVAENG 122

Query: 61  --GELSFERKIRRRTRRSVVRADGPSPSAANRGPTSSFGVGSLLCLCIVLGLF 108
              + SFE+KIRRR RR+V RA+GPSPS+AN   TSSFGVGSLLCLC V GLF
Sbjct: 123 IGNQYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCTVFGLF 172

BLAST of MC09g0649 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.64e-20
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSL---AADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSD 60
           MA IKSL+  I LLALLLLS+ L   AADHG   +    + R  + LQTA E H++ ++ 
Sbjct: 90  MAPIKSLI-SIALLALLLLSEHLPISAADHGVAPSPLARVFR-RDTLQTA-ERHQVAENG 149

Query: 61  --GELSFERKIRRRTRRSVVRADGPSPSAANRGPTSSFGVGSLLCLCIVLGLF 108
              + SFE+KIRRR RR+V RA+GPSPS+AN   TSSFGVGSLLCLC V GLF
Sbjct: 150 IGYQYSFEQKIRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCTVFGLF 199

BLAST of MC09g0649 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.73e-07
Identity = 52/106 (49.06%), Postives = 62/106 (58.49%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSL---AADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSD 60
           MAAIKSL+  I LLALL  S+SL   AAD  G SNS TGMLR  NVLQTA   H +  S+
Sbjct: 1   MAAIKSLLF-ISLLALLFFSESLSTSAADCRGASNSVTGMLR-RNVLQTAT--HEIADSE 60

Query: 61  GELSFERKIRRRTRRSVVRAD----GPSPSAANRGPTSSFGVGSLL 99
           G+++   K     R   V A     G   SAA+R   +SFG+G LL
Sbjct: 61  GKMNVHIKRGGGGRIRPVAAGTGFTGNRKSAASRSQVASFGLGFLL 102

BLAST of MC09g0649 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.44e-07
Identity = 50/117 (42.74%), Postives = 62/117 (52.99%), Query Frame = 0

Query: 1   MAAIKSLVLPIPLLALLLLSQSLAADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSDGEL 60
           MAAI+ LV  I LLALL  S+SL   H     S TG+    N+L T A  HR+     E 
Sbjct: 1   MAAIRPLV-SIALLALLFFSESLLTSH-----SLTGIPH-RNILHTVA--HRIVNGSVES 60

Query: 61  SFERKI-------RRRTRRSVVRADGPS--PSAANRGPTSSFGVGSLLCLCIVLGLF 108
           S++RK        RRR R  ++         SA NR   +SF VGS+LC+CI LGLF
Sbjct: 61  SYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLCICIFLGLF 108

BLAST of MC09g0649 vs. ExPASy TrEMBL
Match: A0A0A0K934 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.87e-05
Identity = 40/97 (41.24%), Postives = 53/97 (54.64%), Query Frame = 0

Query: 4  IKSLVLPIPLLALLLLSQ---SLAADHGGDSNSSTGMLRPNNVLQTAAEDHRLPKSDGEL 63
          IKSL+  + LLALLLLS+   + A +H    NS  GM +     Q         K+    
Sbjct: 5  IKSLI-SVALLALLLLSRFPSTSAVNHNMAPNSPIGMFQMTEYQQVVEN-----KNGYRY 64

Query: 64 SFERKI-RRRTRRSVVRADGPSPSAANRGPTSSFGVG 96
          SFE+KI ++R RRS   A+GPSPS ANR   + F +G
Sbjct: 65 SFEQKIVKKRARRSKKEAEGPSPSMANRSRMTCFIIG 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022992473.19.07e-2157.52uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima][more]
XP_022954099.13.39e-2057.52uncharacterized protein LOC111456466 [Cucurbita moschata][more]
KAG6575858.11.07e-1857.01hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575859.11.15e-1354.39hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6593163.15.25e-1246.85hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1JZB14.39e-2157.52uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GRX21.64e-2057.52uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC1114564... [more]
A0A5A7VLE51.73e-0749.06Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3D3Y62.44e-0742.74E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0K9348.87e-0541.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0649.1MC09g0649.1mRNA