MC09g0475 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0475
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC09: 4213563 .. 4213799 (-)
RNA-Seq Expression	MC09g0475
Synteny	MC09g0475

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGTTCGTCGAGATTCTCGACGCCGGCGTCAGAATCGTCGCCAGATTCCATTCGCATTGCCCTCAGACTGGCCGGATGTACTACCATCCGCCGGCCAACTCCGACGACGGCCACCAGGAGAACCGCCTCGCCCCCGGCGCTCGCGGCGGCGATGTTTCATCTCCGATTGTTCGTTGCCGTGCCAAGGCCGCCGTAGCCGTTGAAATTAATGAGTTTATACTCTACTCTGTC

mRNA sequence

ATGGGGAAGTTCGTCGAGATTCTCGACGCCGGCGTCAGAATCGTCGCCAGATTCCATTCGCATTGCCCTCAGACTGGCCGGATGTACTACCATCCGCCGGCCAACTCCGACGACGGCCACCAGGAGAACCGCCTCGCCCCCGGCGCTCGCGGCGGCGATGTTTCATCTCCGATTGTTCGTTGCCGTGCCAAGGCCGCCGTAGCCGTTGAAATTAATGAGTTTATACTCTACTCTGTC

Coding sequence (CDS)

ATGGGGAAGTTCGTCGAGATTCTCGACGCCGGCGTCAGAATCGTCGCCAGATTCCATTCGCATTGCCCTCAGACTGGCCGGATGTACTACCATCCGCCGGCCAACTCCGACGACGGCCACCAGGAGAACCGCCTCGCCCCCGGCGCTCGCGGCGGCGATGTTTCATCTCCGATTGTTCGTTGCCGTGCCAAGGCCGCCGTAGCCGTTGAAATTAATGAGTTTATACTCTACTCTGTC

Protein sequence

MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGHQENRLAPGARGGDVSSPIVRCRAKAAVAVEINEFILYSV

Homology

[Close]

BLAST of MC09g0475 vs. NCBI nr
Match: TYK10407.1 (hypothetical protein E5676_scaffold459G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (279), Expect = 3.89e-30
Identity = 64/91 (70.33%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGH--QENRLAPGARGGD---VS 60
          MGK VEILDAG RIVARFHSHCPQTGRMYYHPPANSDDGH  +E RL  G  GGD    S
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60

Query: 61 SPIVRC----RAKAA---VAVEINEFILYSV 79
            IVRC    R  AA   V VE NEFILYSV
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVESNEFILYSV 91

[Close]

BLAST of MC09g0475 vs. NCBI nr
Match: KAA0058604.1 (hypothetical protein E6C27_scaffold339G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (277), Expect = 7.41e-30
Identity = 61/89 (68.54%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGHQENRLAPGARGGD---VSSP 60
          MGK VEILDAG RIVARFHSHCPQTGRMYYHPPANSDDGH       G  GGD    S  
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGDGDAASHQ 60

Query: 61 IVRC----RAKAA---VAVEINEFILYSV 79
          IVRC    R  AA   V VE NEFILYSV
Sbjct: 61 IVRCDVAERTAAAFLVVTVESNEFILYSV 89

[Close]

BLAST of MC09g0475 vs. NCBI nr
Match: KAG7025639.1 (hypothetical protein SDJN02_12136, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108 bits (270), Expect = 1.83e-28
Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGH-----QENRLAPGARGGDVS 60
          MG+F+++LDA VRIVARFHSHCPQTGRMYYHPPANSDDGH     +E RL  GARGGDVS
Sbjct: 1  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVS 60

Query: 61 S-PIVRCRAKAAVAVEINEFIL 76
          S  IVRC A+A     +   +L
Sbjct: 61 SNQIVRCDAEAEAEAAVAAAVL 82

[Close]

BLAST of MC09g0475 vs. NCBI nr
Match: KGN45108.1 (hypothetical protein Csa_015813 [Cucumis sativus])

HSP 1 Score: 107 bits (267), Expect = 2.62e-28
Identity = 60/91 (65.93%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGH--QENRLAPGARGGDVSS-P 60
          MGK VEILDAG RIVARFHSHCPQTGRMYYHPPANSDDGH  +E RL  G   GD +S  
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGVGDGDAASHQ 60

Query: 61 IVRCRAKAAVA---------VEINEFILYSV 79
          IV C A+   A         VE NEFILYSV
Sbjct: 61 IVPCVAEPTAAAAAAVLVVTVESNEFILYSV 91

[Close]

BLAST of MC09g0475 vs. NCBI nr
Match: KAG6593287.1 (hypothetical protein SDJN03_12763, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107 bits (266), Expect = 7.43e-28
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGH-----QENRLAPGARGGDVS 60
          MG+F+++LDA VRIVARFHSHCPQTGRMYYHPPANSDDGH     +E RL  G RGGDVS
Sbjct: 1  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGTRGGDVS 60

Query: 61 S-PIVRCRAKAAVAVEINEFIL 76
          S  IVRC A+A     +   +L
Sbjct: 61 SNQIVRCDAEAEAEAAVAAAVL 82

[Close]

BLAST of MC09g0475 vs. ExPASy TrEMBL
Match: A0A5D3CEL3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00500 PE=4 SV=1)

HSP 1 Score: 112 bits (279), Expect = 1.88e-30
Identity = 64/91 (70.33%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGH--QENRLAPGARGGD---VS 60
          MGK VEILDAG RIVARFHSHCPQTGRMYYHPPANSDDGH  +E RL  G  GGD    S
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60

Query: 61 SPIVRC----RAKAA---VAVEINEFILYSV 79
            IVRC    R  AA   V VE NEFILYSV
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVESNEFILYSV 91

[Close]

BLAST of MC09g0475 vs. ExPASy TrEMBL
Match: A0A5A7UTW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00730 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 3.59e-30
Identity = 61/89 (68.54%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGHQENRLAPGARGGD---VSSP 60
          MGK VEILDAG RIVARFHSHCPQTGRMYYHPPANSDDGH       G  GGD    S  
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGDGDAASHQ 60

Query: 61 IVRC----RAKAA---VAVEINEFILYSV 79
          IVRC    R  AA   V VE NEFILYSV
Sbjct: 61 IVRCDVAERTAAAFLVVTVESNEFILYSV 89

[Close]

BLAST of MC09g0475 vs. ExPASy TrEMBL
Match: A0A0A0K6I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426490 PE=4 SV=1)

HSP 1 Score: 107 bits (267), Expect = 1.27e-28
Identity = 60/91 (65.93%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGH--QENRLAPGARGGDVSS-P 60
          MGK VEILDAG RIVARFHSHCPQTGRMYYHPPANSDDGH  +E RL  G   GD +S  
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGVGDGDAASHQ 60

Query: 61 IVRCRAKAAVA---------VEINEFILYSV 79
          IV C A+   A         VE NEFILYSV
Sbjct: 61 IVPCVAEPTAAAAAAVLVVTVESNEFILYSV 91

[Close]

BLAST of MC09g0475 vs. ExPASy TrEMBL
Match: W9R4I1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004679 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 3.84e-26
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGHQENR--LAPGARGGDVSSPI 60
          MGKFVEILD GVRIVARFHSHCPQT RMYYHPPAN+D+ H  N   L  G  GGD    +
Sbjct: 1  MGKFVEILDQGVRIVARFHSHCPQTSRMYYHPPANADNNHHNNNHFLFYGGDGGDGDVKV 60

Query: 61 VRCRAKA-AVAVEINEFILYSV 79
          ++C  KA     E  EFILYSV
Sbjct: 61 MKCGPKAIGGGAENKEFILYSV 82

[Close]

BLAST of MC09g0475 vs. ExPASy TrEMBL
Match: B9RVM3 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0965010 PE=4 SV=1)

HSP 1 Score: 100 bits (248), Expect = 7.12e-26
Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGHQENRLAPGARGGDVSSPIVR 60
          MGK++EILDAGVRIVARFHSHCPQT RMYYHPPANSD+ H  +     A   D S+ +  
Sbjct: 1  MGKYMEILDAGVRIVARFHSHCPQTARMYYHPPANSDEHHHHHDGGSTATASDGSNRVGF 60

Query: 61 CRAKAAVAVEINEFILYSV 79
          C  KAA+ +++ EFI+ SV
Sbjct: 61 CAPKAAMRMDVKEFIICSV 79

[Close]

BLAST of MC09g0475 vs. TAIR 10
Match: AT3G57450.1 (unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 2.0e-12
Identity = 32/54 (59.26%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 1  MGKFVEILDAGVRIVARFHSHCPQTGRMYYHPPANSDDGHQENRLAPGARGGDV 55
          MGK+ E+LD GVRI ARFHSHCPQT R+YYHPP  SD+ H    +     GG V
Sbjct: 1  MGKYTEMLDVGVRIAARFHSHCPQTARLYYHPP--SDNHHHHGGVKDLIGGGGV 52

The following BLAST results are available for this feature:

BLAST of MC09g0475 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0475 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10407.1	3.89e-30	70.33	hypothetical protein E5676_scaffold459G00500 [Cucumis melo var. makuwa]	[more]
KAA0058604.1	7.41e-30	68.54	hypothetical protein E6C27_scaffold339G00730 [Cucumis melo var. makuwa]	[more]
KAG7025639.1	1.83e-28	65.85	hypothetical protein SDJN02_12136, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN45108.1	2.62e-28	65.93	hypothetical protein Csa_015813 [Cucumis sativus]	[more]
KAG6593287.1	7.43e-28	64.63	hypothetical protein SDJN03_12763, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC09g0475 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CEL3	1.88e-30	70.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UTW3	3.59e-30	68.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0K6I8	1.27e-28	65.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426490 PE=4 SV=1	[more]
W9R4I1	3.84e-26	63.41	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004679 PE=4 SV=1	[more]
B9RVM3	7.12e-26	59.49	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0965010 PE=4 SV=1	[more]

BLAST of MC09g0475 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57450.1	2.0e-12	59.26	unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	PANTHER	PTHR33983	OS07G0185900 PROTEIN	coord: 1..79
None	No IPR available	PANTHER	PTHR33983:SF10	SUBFAMILY NOT NAMED	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0475.1	MC09g0475.1	mRNA