MC09g0398 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0398
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	MAGUK p55 subfamily member 4 like
Location	MC09: 3594374 .. 3596155 (-)
RNA-Seq Expression	MC09g0398
Synteny	MC09g0398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCTGGCACAAGATGATTTTCCCCGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGCGTTAGGGCTCGCAAGAACGGTCAGTCTCTTAATACTCTACTTCTTTTGATTGATTTTAGAGTTTTTTTTAAATCGAAGTTTGATTATGACTTTTGCTCGAATGTACTGATGATCTCGACCGAATGGACTTAATCTGACTGAAGGAATTGCTGTATTTCGTTCTCTTTTTACTTTTCTTCCTCCTGTTCTGATTTTTAATTTCTGAACTCTGAACTCTGTCGATTTTCTCCATGTCGCCATTTGGAATTGTTTACTGCGGAAGAGTTTGTTTGCATCGTCATCTACAGTTTTCTGCATAAGATTGTGATATTGATTTGAGGGATAAGATTTTCGTTCTCGATTTGCCATGAGAGGAAAGAATTTCGAAAAATATGGGAGGAGCTAGCCATCAGGTTTATAATACTAATTTCTTAATCTGTTTCTTTAAAATACCTTTAACAATTTGAATTTGTTGTATTATACCTTGATCTGTATGCGATGGTCATTGACTCATTAGCCACTTGATCCCAACCACTACGATATGAGACTGAGAGAGAGAGAGAGAGATAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCTAGAAGGCAATAAATGGCCATGTGATTATGCAACCTCCTCAGTTCAATAATTTGGTAGGAAAATCACAACGATCCCATTTGATCATGTATTCCTTTTTCTCCAAAGTGATCCTAAATGGCCAAAAACTATCACCAAATATGGTCATCAAATATTTCTTCAATTTTTAGGAATCTATGTGAAAAATTCCTTCAAGTTTACAAGCCATAGGTGAATCTATTTTTAAGCTATCACCAAATATGGACATCTCCTTTGAAAGTAAATTTATTTTCCCATTAAGATATTTTATCCCATGAATCTCTCCCACCATTTTAATAATGCACTAAAAAGGTTCCCACTAGCAGTTCAGTAGAGAAGACAGTGAAAGATTGAAGCCACTTTGAAGATTAAAATTCCTTTTTTTTTTCTCTATTACAGCTTTGATTGTCATTGTCCTGTTGTGATTCTTAACAGTAATCCCACTTAACACTTATGACGGCCACCAAAATTAGTGACCAAATTTGATTTGTTTTTGCACTTCTATTACTATTACAAGCAGGAGGACAAGAGGCGTGGCCATCTCTAGACTTTTATTATTCTTTTTAGTATTGTCCCAAGTCGCTTTAATTGACAATTTGACAAGCACCACAAAATTCACAACCAATATATATATTCTTTCCAAAAATATATAGAGAGAGAGAGAAATGAAGTGGAGTTAGGTCAATCCTGTCCTTCTTGATGGGCTGGGCCCAAATCTGCAGGCCCATTTACTTCTGAATTTGTTGTATGGGTGGCCCAAAAGATGTTTTGAAAATGCTCGAGCAATCATGAAAATGCTCTTTTGATAACTTGAGCTAAGCAACTGTGTCATTTTTGCTGCTTACAGGAGCTGGACTTTTGAAGCTCCATGATGATGTAGAAACCTGCGGGTATGAAGATGTGAAGGTGATGTGGGAAATGCTTCGTAGATCGGAGTCGGAGCTGGTCGGTCACCAGCCGAAGCGGAAGCAGCGGCCGTTCTGGCGAGTCTCGGTGTGGTCCAACCATGCCGCTGCAGCCTCGTCTTTCACTGCAACTCATGCT

mRNA sequence

ATGGAGCTCTGGCACAAGATGATTTTCCCCGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGCGTTAGGGCTCGCAAGAACGGAGCTGGACTTTTGAAGCTCCATGATGATGTAGAAACCTGCGGGTATGAAGATGTGAAGGTGATGTGGGAAATGCTTCGTAGATCGGAGTCGGAGCTGGTCGGTCACCAGCCGAAGCGGAAGCAGCGGCCGTTCTGGCGAGTCTCGGTGTGGTCCAACCATGCCGCTGCAGCCTCGTCTTTCACTGCAACTCATGCT

Coding sequence (CDS)

ATGGAGCTCTGGCACAAGATGATTTTCCCCGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGCGTTAGGGCTCGCAAGAACGGAGCTGGACTTTTGAAGCTCCATGATGATGTAGAAACCTGCGGGTATGAAGATGTGAAGGTGATGTGGGAAATGCTTCGTAGATCGGAGTCGGAGCTGGTCGGTCACCAGCCGAAGCGGAAGCAGCGGCCGTTCTGGCGAGTCTCGGTGTGGTCCAACCATGCCGCTGCAGCCTCGTCTTTCACTGCAACTCATGCT

Protein sequence

MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA

Homology

[Close]

BLAST of MC09g0398 vs. NCBI nr
Match: XP_022143553.1 (uncharacterized protein LOC111013423 [Momordica charantia])

HSP 1 Score: 196 bits (498), Expect = 2.89e-63
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
Sbjct: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93

[Close]

BLAST of MC09g0398 vs. NCBI nr
Match: XP_038900267.1 (uncharacterized protein LOC120087349 [Benincasa hispida])

HSP 1 Score: 193 bits (490), Expect = 4.81e-62
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          VGHQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Sbjct: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

[Close]

BLAST of MC09g0398 vs. NCBI nr
Match: KGN45194.1 (hypothetical protein Csa_015637 [Cucumis sativus])

HSP 1 Score: 190 bits (483), Expect = 5.63e-61
Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVSARVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          V HQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Sbjct: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

[Close]

BLAST of MC09g0398 vs. NCBI nr
Match: XP_016902643.1 (PREDICTED: uncharacterized protein LOC107991796 [Cucumis melo])

HSP 1 Score: 189 bits (480), Expect = 1.62e-60
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVS+RVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSSRVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          V HQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Sbjct: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

[Close]

BLAST of MC09g0398 vs. NCBI nr
Match: XP_023548962.1 (uncharacterized protein LOC111807461 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187 bits (475), Expect = 9.36e-60
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWL VSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLTVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          VGH+PKRK RPFWRVSVWSNHAAAASS+TATHA
Sbjct: 61 VGHRPKRKLRPFWRVSVWSNHAAAASSYTATHA 93

[Close]

BLAST of MC09g0398 vs. ExPASy TrEMBL
Match: A0A6J1CR01 (uncharacterized protein LOC111013423 OS=Momordica charantia OX=3673 GN=LOC111013423 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 1.40e-63
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
Sbjct: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93

[Close]

BLAST of MC09g0398 vs. ExPASy TrEMBL
Match: A0A0A0K8I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430780 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 2.73e-61
Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVSARVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          V HQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Sbjct: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

[Close]

BLAST of MC09g0398 vs. ExPASy TrEMBL
Match: A0A1S4E346 (uncharacterized protein LOC107991796 OS=Cucumis melo OX=3656 GN=LOC107991796 PE=4 SV=1)

HSP 1 Score: 189 bits (480), Expect = 7.82e-61
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVS+RVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSSRVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          V HQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Sbjct: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

[Close]

BLAST of MC09g0398 vs. ExPASy TrEMBL
Match: A0A6J1JS76 (uncharacterized protein LOC111488437 OS=Cucurbita maxima OX=3661 GN=LOC111488437 PE=4 SV=1)

HSP 1 Score: 186 bits (471), Expect = 1.85e-59
Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWL VSARVRARK+GAGLLKLHDDVETCGYEDVKVMWE+LRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLTVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEILRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93
          VGH+PKRK RPFWRVSVWSNHAAAASS+TATHA
Sbjct: 61 VGHRPKRKLRPFWRVSVWSNHAAAASSYTATHA 93

[Close]

BLAST of MC09g0398 vs. ExPASy TrEMBL
Match: A0A5A7UWX2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001420 PE=4 SV=1)

HSP 1 Score: 184 bits (466), Expect = 1.18e-58
Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVS+RVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSSRVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VGHQPKRKQRPFWRVSVWSNHAAAA---SSFTATHA 93
          V HQPKRKQRPFWRVSVWSNHAAAA   SS+TATHA
Sbjct: 61 VSHQPKRKQRPFWRVSVWSNHAAAAAAASSYTATHA 96

[Close]

BLAST of MC09g0398 vs. TAIR 10
Match: AT5G43150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 28/77 (36.36%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 2  ELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL- 61
          E W+ M FP RR+W   + RV  R   +GLL+L  DV +C YED+ +MW +L ++E    
Sbjct: 8  EWWNTMAFPTRRIWNRFTVRVGFRH--SGLLRLEHDVSSCEYEDIHIMWNLLHKNEDLTR 67

Query: 62 --VGHQPKRKQRPFWRV 76
            +  Q +++++P W +
Sbjct: 68 VPIQQQQQQRKKPCWNL 82

The following BLAST results are available for this feature:

BLAST of MC09g0398 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0398 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143553.1	2.89e-63	100.00	uncharacterized protein LOC111013423 [Momordica charantia]	[more]
XP_038900267.1	4.81e-62	97.85	uncharacterized protein LOC120087349 [Benincasa hispida]	[more]
KGN45194.1	5.63e-61	96.77	hypothetical protein Csa_015637 [Cucumis sativus]	[more]
XP_016902643.1	1.62e-60	95.70	PREDICTED: uncharacterized protein LOC107991796 [Cucumis melo]	[more]
XP_023548962.1	9.36e-60	94.62	uncharacterized protein LOC111807461 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC09g0398 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CR01	1.40e-63	100.00	uncharacterized protein LOC111013423 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0K8I7	2.73e-61	96.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430780 PE=4 SV=1	[more]
A0A1S4E346	7.82e-61	95.70	uncharacterized protein LOC107991796 OS=Cucumis melo OX=3656 GN=LOC107991796 PE=...	[more]
A0A6J1JS76	1.85e-59	93.55	uncharacterized protein LOC111488437 OS=Cucurbita maxima OX=3661 GN=LOC111488437...	[more]
A0A5A7UWX2	1.18e-58	92.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MC09g0398 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43150.1	2.2e-10	36.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181:SF19	OSJNBA0041A02.21-LIKE PROTEIN	coord: 2..88
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 2..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0398.1	MC09g0398.1	mRNA