MC09g0180 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0180
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReceptor-type tyrosine-protein like
LocationMC09: 1612849 .. 1613154 (+)
RNA-Seq ExpressionMC09g0180
SyntenyMC09g0180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGACGAAGCCCAATCCCTCCTCCCCTCCGGCCACCGGCGGCCGTATCGCCTCCGCATCCACCTCCGCCGGAGGAGGCTGCCGACGGCCCGCCTCGGAGGGAGAAGGCCGCCGCGAGTGGTGGCGTTTTGGAGGTCATTTAGGGACATCCAAATTAGGAAGTGGCTGATGAGGGTGCGCTGCACGTGCCTCCTCAAAAAGCTTAATCCATTGTTCGGAAAAGGCACCGCCGGCGCCGTCGTTGCTTTTCAGAAAAGGATTCTAATGGAGATTTCGTTGGCCGTTCCTGTTCTTGGCGCCTCTCTC

mRNA sequence

CAAGACGAAGCCCAATCCCTCCTCCCCTCCGGCCACCGGCGGCCGTATCGCCTCCGCATCCACCTCCGCCGGAGGAGGCTGCCGACGGCCCGCCTCGGAGGGAGAAGGCCGCCGCGAGTGGTGGCGTTTTGGAGGTCATTTAGGGACATCCAAATTAGGAAGTGGCTGATGAGGGTGCGCTGCACGTGCCTCCTCAAAAAGCTTAATCCATTGTTCGGAAAAGGCACCGCCGGCGCCGTCGTTGCTTTTCAGAAAAGGATTCTAATGGAGATTTCGTTGGCCGTTCCTGTTCTTGGCGCCTCTCTC

Coding sequence (CDS)

CAAGACGAAGCCCAATCCCTCCTCCCCTCCGGCCACCGGCGGCCGTATCGCCTCCGCATCCACCTCCGCCGGAGGAGGCTGCCGACGGCCCGCCTCGGAGGGAGAAGGCCGCCGCGAGTGGTGGCGTTTTGGAGGTCATTTAGGGACATCCAAATTAGGAAGTGGCTGATGAGGGTGCGCTGCACGTGCCTCCTCAAAAAGCTTAATCCATTGTTCGGAAAAGGCACCGCCGGCGCCGTCGTTGCTTTTCAGAAAAGGATTCTAATGGAGATTTCGTTGGCCGTTCCTGTTCTTGGCGCCTCTCTC

Protein sequence

QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLMRVRCTCLLKKLNPLFGKGTAGAVVAFQKRILMEISLAVPVLGASL
Homology
BLAST of MC09g0180 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135 bits (340), Expect = 1.05e-38
Identity = 73/108 (67.59%), Postives = 80/108 (74.07%), Query Frame = 0

Query: 1   QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLMRVR 60
           +DEAQSLL S HRRP+R  IHLRR+RLP  RLGG RPPR  A WRS   I+ RKWLM++R
Sbjct: 10  KDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRS---IRFRKWLMKIR 69

Query: 61  CTCLLKKLNPLFGKGTA------GAVVAFQKRILMEISLAVPVLGASL 102
           C CL+KKL  LFGKGT       G   AF KRILMEISLAVPVLGASL
Sbjct: 70  CDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASL 114

BLAST of MC09g0180 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132 bits (332), Expect = 1.54e-37
Identity = 68/101 (67.33%), Postives = 76/101 (75.25%), Query Frame = 0

Query: 1   QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLMRVR 60
           QDEAQ LL SGHRRP R  IHLRR++L TARLGGRRPPR    WRS R +++RKWLM+VR
Sbjct: 10  QDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVRMRKWLMKVR 69

Query: 61  CTCLLKKLNPLFGKGTAGAVVAFQKRILMEISLAVPVLGAS 101
           C C +KK+N LF K   G    F KRILMEIS AVPVLGAS
Sbjct: 70  CDCKVKKINELFDKDNGG-FNGFLKRILMEISSAVPVLGAS 109

BLAST of MC09g0180 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132 bits (332), Expect = 1.54e-37
Identity = 68/101 (67.33%), Postives = 76/101 (75.25%), Query Frame = 0

Query: 1   QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLMRVR 60
           QDEAQ LL SGHRRP R  IHLRR++L TARLGGRRPPR    WRS R +++RKWLM+VR
Sbjct: 10  QDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVRMRKWLMKVR 69

Query: 61  CTCLLKKLNPLFGKGTAGAVVAFQKRILMEISLAVPVLGAS 101
           C C +KK+N LF K   G    F KRILMEIS AVPVLGAS
Sbjct: 70  CDCKVKKMNELFDKDNGG-FNGFLKRILMEISSAVPVLGAS 109

BLAST of MC09g0180 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (257), Expect = 3.15e-26
Identity = 61/106 (57.55%), Postives = 74/106 (69.81%), Query Frame = 0

Query: 1   QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWL---- 60
           QDEA+SLL SG+RRP R  I LRR++LPTARLGGRRPPR VA WRS ++I++RKW     
Sbjct: 10  QDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRKWAAMMT 69

Query: 61  MRVRCTCLLKKLNPLFGKGTAGAVVAFQKRILMEISLAVPVLGASL 102
           M+VRC            K  AG   AF K+IL+EISLA+P+LG SL
Sbjct: 70  MKVRC------------KDIAG-FNAFLKKILLEISLAIPLLGVSL 102

BLAST of MC09g0180 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 1.31e-22
Identity = 54/106 (50.94%), Postives = 71/106 (66.98%), Query Frame = 0

Query: 1   QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLM--- 60
           +DEA+SLL SG+RRP R  I LRR++LPTARLGGRRPPR  A WRS ++I++RKW M   
Sbjct: 11  EDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRKWAMTMT 70

Query: 61  -RVRCTCLLKKLNPLFGKGTAGAVVAFQKRILMEISLAVPVLGASL 102
            +VRC  +              +  AF ++IL+EISLA+P+LG  L
Sbjct: 71  NKVRCKDI-------------ASFNAFLRKILLEISLAIPLLGDGL 103

BLAST of MC09g0180 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 1.52e-26
Identity = 61/106 (57.55%), Postives = 74/106 (69.81%), Query Frame = 0

Query: 1   QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWL---- 60
           QDEA+SLL SG+RRP R  I LRR++LPTARLGGRRPPR VA WRS ++I++RKW     
Sbjct: 10  QDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRKWAAMMT 69

Query: 61  MRVRCTCLLKKLNPLFGKGTAGAVVAFQKRILMEISLAVPVLGASL 102
           M+VRC            K  AG   AF K+IL+EISLA+P+LG SL
Sbjct: 70  MKVRC------------KDIAG-FNAFLKKILLEISLAIPLLGVSL 102

BLAST of MC09g0180 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.10e-24
Identity = 55/106 (51.89%), Postives = 72/106 (67.92%), Query Frame = 0

Query: 1   QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLM--- 60
           +DEA+SLL SG+RRP R  I LRR++LPTARLGGRRPPR  A WRS ++I++RKW M   
Sbjct: 11  EDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRKWAMTMT 70

Query: 61  -RVRCTCLLKKLNPLFGKGTAGAVVAFQKRILMEISLAVPVLGASL 102
            +VRC  +              +  AF ++IL+EISLA+P+LG SL
Sbjct: 71  NKVRCKDI-------------ASFNAFLRKILLEISLAIPLLGVSL 103

BLAST of MC09g0180 vs. ExPASy TrEMBL
Match: A0A5N6QI76 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003523 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.09e-13
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 0

Query: 7   LLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLMRVRCTCLLK 66
           ++P+      RL+I LRRR+LPT RLGG++P R     R FR +++R WL +++ TC+LK
Sbjct: 17  IIPAVRGPTTRLQISLRRRKLPTVRLGGKKPRRGFTLARVFRRLRLR-WL-KLQYTCMLK 76

Query: 67  KLNPLFGKGT-----AGAVV-AFQKRILMEISLAVPVLGAS 101
           KL   +         AGA +  F +R+LME SLAVPVLG S
Sbjct: 77  KLREYYRNLVKDMVDAGATLETFHQRVLMEASLAVPVLGVS 115

BLAST of MC09g0180 vs. ExPASy TrEMBL
Match: A0A6P3Z3H6 (uncharacterized protein LOC107406823 OS=Ziziphus jujuba OX=326968 GN=LOC107406823 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 9.79e-12
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 0

Query: 8   LPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLMRVRCTCLLKK 67
           L + +RR  R  I LRRRR+P  RLGG+RP RVV      R I++R WL ++R   +L+K
Sbjct: 14  LTNPNRRVVRRTIPLRRRRVPAIRLGGKRPGRVVGLIGILRRIKVR-WL-KLRYLYMLRK 73

Query: 68  LNPLFGKGT------AGAVVAFQKRILMEISLAVPVLGAS 101
           L   + K        +  + AFQ+R+L+E S AVPV+G S
Sbjct: 74  LREYYRKTVKELKEASATIEAFQQRVLLETSFAVPVMGVS 111

BLAST of MC09g0180 vs. ExPASy TrEMBL
Match: B9T8J8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0134370 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.29e-11
Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = 0

Query: 1   QDEAQSLLPSGHRRPYRLRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLMRVR 60
           +   Q+ L +  R P R +I LRRR+LPT RLGG++P R     R  R +++ KWL +++
Sbjct: 6   ETPCQTHLTTTFRWPTRRKIWLRRRKLPTLRLGGKKPRRGSFLIRVLRKVRL-KWL-KLQ 65

Query: 61  CTCLLKKLNPLFGK-----GTAGAVV-AFQKRILMEISLAVPVLG 99
            +C+L+KL   +         AGA +  +Q+R++ME SLAVPVLG
Sbjct: 66  YSCMLRKLKEYYRNLIKDVVEAGATIEVYQQRLVMEASLAVPVLG 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6593556.11.05e-3867.59hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7013982.11.54e-3767.33hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575440.11.54e-3767.33hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0059393.13.15e-2657.55hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK039... [more]
KAE8646502.11.31e-2250.94hypothetical protein Csa_015773 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7UTZ41.52e-2657.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KCH42.10e-2451.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1[more]
A0A5N6QI761.09e-1345.54Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003523 PE=4 SV=1[more]
A0A6P3Z3H69.79e-1243.00uncharacterized protein LOC107406823 OS=Ziziphus jujuba OX=326968 GN=LOC10740682... [more]
B9T8J81.29e-1140.95Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0134370 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0180.1MC09g0180.1mRNA