MC08g2535 (gene) Bitter gourd (Dali-11) v1
|
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATGTAAGTTCTTTATTTGGTGTATTCTTCACCGTGCTTTAAACACCCAGGAAAAGCTACAGCGTCGCGCCCCAAATTTATAGTTGGTCCTGGGTGTTGTATTCTCTACAAATCGGCCTCAGAAAGCTTGGACCATCTATTCAAATGTAAGTTCTTTATTTGGTGTATTCTTCACCGTGCTTTAAACACCCAGGAAAAGCTACAGCGTCGCCCCAAATTTATAGTTGGTCCTGGGTGTTGTATTCTCTACAAATCGGCCTCAGAAAGCTTGGACCATCTATTC AAATGTAAGTTCTTTATTTGGTGTATTCTTCACCGTGCTTTAAACACCCAGGAAAAGCTACAGCGTCGCCCCAAATTTATAGTTGGTCCTGGGTGTTGTATTCTCTACAAATCGGCCTCAGAAAGCTTGGACCATCTATTC KCKFFIWCILHRALNTQEKLQRRPKFIVGPGCCILYKSASESLDHLF Homology
BLAST of MC08g2535 vs. NCBI nr
Match: KAA0056839.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ99342.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 59.3 bits (142), Expect = 1.48e-08 Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of MC08g2535 vs. NCBI nr
Match: TYK10888.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 2.82e-08 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MC08g2535 vs. NCBI nr
Match: KAA0033985.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK02560.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 3.40e-08 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MC08g2535 vs. NCBI nr
Match: KAA0067274.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 5.16e-08 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MC08g2535 vs. NCBI nr
Match: TYK28859.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 7.06e-08 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MC08g2535 vs. ExPASy TrEMBL
Match: A0A5A7UTI6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005580 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 7.15e-09 Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of MC08g2535 vs. ExPASy TrEMBL
Match: A0A5D3CI43 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00600 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.37e-08 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MC08g2535 vs. ExPASy TrEMBL
Match: A0A5A7SXS1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00120 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.64e-08 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MC08g2535 vs. ExPASy TrEMBL
Match: A0A5A7VIU9 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00940 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.50e-08 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MC08g2535 vs. ExPASy TrEMBL
Match: A0A5D3DZM5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00720 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.42e-08 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|