MC08g2482 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGCTGGTGAGCATTGGGAAAGCTTTTTCGTGCTTCTCAAATAGGAGAGGTTCCAGATCGTGCTTCTGCCTCAAAATTGAAGACACTTCTGATCAGAAAAAACAGCCATTATTAATACCAAAACAAACAACAAAATTATCTCACCTTCTCACACTCCACGATCATCAACTCCCTCTTCATTTCACCCCCAAGGTCAGCTCTCACCTCCCCCTCCTTTATTATAGAATATTTATTTACTTTTTAAAAACTTGTCATTTTTCTTTTTTCTTAAATGCGTTCGTTGAATTTAAAGTTTCCAGCTCTTCACTCCTATTTTTATTTTTTTTAATCTATATTTTACTTTTCTTCGGTACAACCACGTGTAGAGATGAAATCGGACGTATGAGATCTTTTGATGATCTAGTTGAGTTGTGTTCTTGGCACATATTAAAGTTTTTAAATTAAAAACAAAAGTAAGGGTGAGGTTTGAAAATGAGGGTAGAAAGAGTGATTTTAAAAATAAAAATATTAAAGTATAATTGATTTTTCAAAATCATTGTCCAAGAAATATCTTAAAAATCAATATAGGGTGATTTTAAACTTTCATAAAATCAAATAATTTTAATTTGTCAAACATATAAGTGACATGAGAGTGATTTTGACAATGACAAAAAGTGATTTGATGACGATAACTACTTGGTTTCTCTATTTTGACTGCTAACAATTTAATGACGATATGTATTGTTGTTTTAAATACTTGTTGAAACTACATAGTTAGGCCTAGCTGAGGCGGATTGATATTAAAATAATGAGAAGGATAAAAATATTATTTTGTTTGTGAATTAAAATATGTATTTTATTTTAAAAGTTTATTCATCAAAGTAAAAATAAAATAAATTTGGCAGTTTGACAAAACTATAACTTTAAACATTTTATAAATTATAGTCAATTTAGGAACATTTTGTATAATTTAACCAAAATATAAATTAAATTAAATCAATAATACATATTCTAAAAAAATATAAAATAATAATAATATAAAGTTTATATTTATTGTTTTTCTCTTTTTATTATACTATTTCAGGTGTGGAGTCTTATAAGGTGGATTTGGAAAGGAGGATGGTGGTTGTTACTGGAGATGTGTTTCCTTTTGAAGTTCTGCAGAGCATTTCTAAAGTGAAAAGTGCAGAGTTATTGGAATCC ATGGGAAAGCTGGTGAGCATTGGGAAAGCTTTTTCGTGCTTCTCAAATAGGAGAGGTTCCAGATCGTGCTTCTGCCTCAAAATTGAAGACACTTCTGATCAGAAAAAACAGCCATTATTAATACCAAAACAAACAACAAAATTATCTCACCTTCTCACACTCCACGATCATCAACTCCCTCTTCATTTCACCCCCAAGGTCAGCTCTCACCTCCCCCTCCTTTATTATAGAATATTTATTTACTTTTTAAAAACTTGTGTGGAGTCTTATAAGGTGGATTTGGAAAGGAGGATGGTGGTTGTTACTGGAGATGTGTTTCCTTTTGAAGTTCTGCAGAGCATTTCTAAAGTGAAAAGTGCAGAGTTATTGGAATCC ATGGGAAAGCTGGTGAGCATTGGGAAAGCTTTTTCGTGCTTCTCAAATAGGAGAGGTTCCAGATCGTGCTTCTGCCTCAAAATTGAAGACACTTCTGATCAGAAAAAACAGCCATTATTAATACCAAAACAAACAACAAAATTATCTCACCTTCTCACACTCCACGATCATCAACTCCCTCTTCATTTCACCCCCAAGGTCAGCTCTCACCTCCCCCTCCTTTATTATAGAATATTTATTTACTTTTTAAAAACTTGTGTGGAGTCTTATAAGGTGGATTTGGAAAGGAGGATGGTGGTTGTTACTGGAGATGTGTTTCCTTTTGAAGTTCTGCAGAGCATTTCTAAAGTGAAAAGTGCAGAGTTATTGGAATCC MGKLVSIGKAFSCFSNRRGSRSCFCLKIEDTSDQKKQPLLIPKQTTKLSHLLTLHDHQLPLHFTPKVSSHLPLLYYRIFIYFLKTCVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES Homology
BLAST of MC08g2482 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus]) HSP 1 Score: 96.3 bits (238), Expect = 1.70e-22 Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 0
BLAST of MC08g2482 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 copper-binding family protein [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 9.24e-20 Identity = 74/145 (51.03%), Postives = 87/145 (60.00%), Query Frame = 0
BLAST of MC08g2482 vs. NCBI nr
Match: XP_008463373.1 (PREDICTED: uncharacterized protein LOC103501543 [Cucumis melo]) HSP 1 Score: 79.3 bits (194), Expect = 7.62e-16 Identity = 62/144 (43.06%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of MC08g2482 vs. NCBI nr
Match: XP_022946348.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 77.4 bits (189), Expect = 2.76e-15 Identity = 63/132 (47.73%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of MC08g2482 vs. NCBI nr
Match: XP_022999545.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 77.4 bits (189), Expect = 2.76e-15 Identity = 62/132 (46.97%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of MC08g2482 vs. ExPASy TrEMBL
Match: A0A5A7V1Y2 (Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001300 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.47e-20 Identity = 74/145 (51.03%), Postives = 87/145 (60.00%), Query Frame = 0
BLAST of MC08g2482 vs. ExPASy TrEMBL
Match: A0A1S3C8H9 (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.47e-20 Identity = 74/145 (51.03%), Postives = 87/145 (60.00%), Query Frame = 0
BLAST of MC08g2482 vs. ExPASy TrEMBL
Match: A0A1S3CJJ6 (uncharacterized protein LOC103501543 OS=Cucumis melo OX=3656 GN=LOC103501543 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.69e-16 Identity = 62/144 (43.06%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of MC08g2482 vs. ExPASy TrEMBL
Match: A0A6J1KFP0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493873 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.34e-15 Identity = 62/132 (46.97%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of MC08g2482 vs. ExPASy TrEMBL
Match: A0A6J1G3J1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450448 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.34e-15 Identity = 63/132 (47.73%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of MC08g2482 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09 Identity = 48/139 (34.53%), Postives = 68/139 (48.92%), Query Frame = 0
BLAST of MC08g2482 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 41.6 bits (96), Expect = 5.5e-04 Identity = 18/35 (51.43%), Postives = 25/35 (71.43%), Query Frame = 0
BLAST of MC08g2482 vs. TAIR 10
Match: AT2G37390.2 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 41.6 bits (96), Expect = 5.5e-04 Identity = 18/35 (51.43%), Postives = 25/35 (71.43%), Query Frame = 0
BLAST of MC08g2482 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 41.2 bits (95), Expect = 7.2e-04 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 0
BLAST of MC08g2482 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 41.2 bits (95), Expect = 7.2e-04 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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