MC08g2455 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2455
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Alba domain-containing protein
Location	MC08: 33358849 .. 33361053 (-)
RNA-Seq Expression	MC08g2455
Synteny	MC08g2455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAGGAATGAAGGTTATAAAAATATAACTAATATGAGGTTTGAATTCGTTATAAATCAAAATCAGGAATAATTATTTAGAATGAAAAAATATTTAAAAAAAAATGGAAAAGACGGAATGGAAAGAAAAACAAAAACACAAAAGAAAAGGAGAGAAGGGTATTATTGTACTTTCACATACACGTCAAATCAAGAAATGTTATTAGACGAAGTATTCGAACCAAAGCTTATAACTCAGCCTTTGACCTCAGCAACCGAAAAACTAGGGTTTTGAGTTACAGTTTCTTAGGGTTTTTTGCGAGGTTGAGCAGCTCAATGGAAGAAATTGTGGAAGGTGTGAACTCCCTGAATTTGGGTCCCGATGGGTATAAGAAGAATCGGATTCAGGTCTCCAACACCAAGAAACCATTGTTCTTCTATGTCAATCTCGCTAAGGTTTGCTAGTTTCCAATGTTTCGAATCTTCGATTCCCTCGTTCTTCGTACCGGGTTTTGTGTAATTACTTATTGGAAAATATTTTGTTTTCCCTATGATAACTGGTTTCAGTTTAATTATAATGTCCCGTGTTTCTGACTTTTGTTTTCGGTTTTAATTGTAGAGGTACATGCAGCAGCATAATGAGGTCGAACTTTCTGCTCTTGGAATGGGTAATTTTTCTGCATTATCTTTCTGTTCTTGTTCTTTTAACACTACACCTGACTTTAAATCCTAAACCCTAGCAGAAATGGGACCGTGTAATTGTATTTGTAGTTGTATAAAATAGATTTCAGAGTCATAATTTTCATTTGATTTGGAGTCTGCCTTACCTGGCTAGTGCCGAGTTTTGGGATGGTCAGTAAATGAAGTGAAGTAATAGTGTGGATACTTATCTATTTTTAATACGCTCTTAATGGTAGCTTATATATATTCAACCTTCGCCTGAGCAATGGGCAATTCGTTTGTTTCCTTTCTCGTTGCCATTTGACTCTTTCCAATCCTCCATGAATCTGACGACCTTAGTAATTCTCACCTCTACAACCTGGGTGCTATGCCACACTATGTGGATTAACTTCATTGCAAAGTGAATTAATATTTTTGGATGCTGACTGAGAACTTCAGTTCTATTGGAACTAGATAGGCTATGGAATAGAGAATGTTTTGGAAAAGCTTGCAAGATAGTTTCTAATATTATCTTTGTTAATGTCAAGTTTTTGGATGACTAACGTTTGAAAACAAGGCTAACTGGCCGGGCTTTAACAACTTTTGTTTAAGATTTTTGTGGCATTATTCACATTTGATTTTTGGTGCATAAATGAGACTTGCTCTTCAATTTTGTTCATTCGCTGTAACATATTATCCCAGACTCACGGATATGTGTACTTGCAACGTTTTGCAGCAATTGCCACTGTTGTTACTGTTGCCGAAATTTTGAAAAACAATGGATTGGTTGTTGAGAAGAGTAAGGCTTCTGGCTTTTTTCACTTTCAGAAACAAACACTGTTTACTTTTGTTCCTTATAGTGACTTGCATCAAATTTACAGAGATTGCAACTTCAACTGTTGATATCAAGGATGACTCAAGAGGTCGACCTGTCCAAAAGGCCAAGGTAAAGATTACCCTAAAAATAAGATCCTTAATAAGTAAATACTTGATGTATGCAAACTGCGGCATTTACAGGAGAGAGAGTTAAGCCGTGAGCCTTCTTAGTATGTAGGTTCCTTTTTCATTCGGGCATCAAAATAAGTCCAAAGCTAGTCTGCATGTTTTAGTTGGATGGTCTATATTTCCTCTTTATGTTTATTTTTAGTTAGTGTTCCTCTATCACCATTGAACTCAATAAATTATGATATTTTATTTTTCCAAGACCACCTTGAATAATTACTGTAACCTTTGGCCTCAACAGATTGAGATATTGCTGGGTAAAACCGAAAACTTTGACGAATTGATGGCAGCTGCTGCTGAGGAAAGGGGGGACACAGGCGATACTGATGAGCAGAGTTAAAGATGAAATACATTTGATGTATCTTGTCTTTTAGTTACAATTTTTGTTTGTGATGAACCGAATTTTCCATTAATTATTCGTAGCTCTCTAGGTACTCGAGGAGTCGAGGCACTAATTTTCATAGTGAGTTTGTTCATAATTTCATTTTAGGGATCTTCATAATTTATTTGGAGTTTTTCCATATAGAAAGCCATTATTTTTTATTCTGATATTTTGTCTTCC

mRNA sequence

GAAAAAAGGAATGAAGGTTATAAAAATATAACTAATATGAGGTTTGAATTCGTTATAAATCAAAATCAGGAATAATTATTTAGAATGAAAAAATATTTAAAAAAAAATGGAAAAGACGGAATGGAAAGAAAAACAAAAACACAAAAGAAAAGGAGAGAAGGGTATTATTGTACTTTCACATACACGTCAAATCAAGAAATGTTATTAGACGAAGTATTCGAACCAAAGCTTATAACTCAGCCTTTGACCTCAGCAACCGAAAAACTAGGGTTTTGAGTTACAGTTTCTTAGGGTTTTTTGCGAGGTTGAGCAGCTCAATGGAAGAAATTGTGGAAGGTGTGAACTCCCTGAATTTGGGTCCCGATGGGTATAAGAAGAATCGGATTCAGGTCTCCAACACCAAGAAACCATTGTTCTTCTATGTCAATCTCGCTAAGAGGTACATGCAGCAGCATAATGAGGTCGAACTTTCTGCTCTTGGAATGGCAATTGCCACTGTTGTTACTGTTGCCGAAATTTTGAAAAACAATGGATTGGTTGTTGAGAAGAAGATTGCAACTTCAACTGTTGATATCAAGGATGACTCAAGAGGTCGACCTGTCCAAAAGGCCAAGATTGAGATATTGCTGGGTAAAACCGAAAACTTTGACGAATTGATGGCAGCTGCTGCTGAGGAAAGGGGGGACACAGGCGATACTGATGAGCAGAGTTAAAGATGAAATACATTTGATGTATCTTGTCTTTTAGTTACAATTTTTGTTTGTGATGAACCGAATTTTCCATTAATTATTCGTAGCTCTCTAGGTACTCGAGGAGTCGAGGCACTAATTTTCATAGTGAGTTTGTTCATAATTTCATTTTAGGGATCTTCATAATTTATTTGGAGTTTTTCCATATAGAAAGCCATTATTTTTTATTCTGATATTTTGTCTTCC

Coding sequence (CDS)

ATGGAAGAAATTGTGGAAGGTGTGAACTCCCTGAATTTGGGTCCCGATGGGTATAAGAAGAATCGGATTCAGGTCTCCAACACCAAGAAACCATTGTTCTTCTATGTCAATCTCGCTAAGAGGTACATGCAGCAGCATAATGAGGTCGAACTTTCTGCTCTTGGAATGGCAATTGCCACTGTTGTTACTGTTGCCGAAATTTTGAAAAACAATGGATTGGTTGTTGAGAAGAAGATTGCAACTTCAACTGTTGATATCAAGGATGACTCAAGAGGTCGACCTGTCCAAAAGGCCAAGATTGAGATATTGCTGGGTAAAACCGAAAACTTTGACGAATTGATGGCAGCTGCTGCTGAGGAAAGGGGGGACACAGGCGATACTGATGAGCAGAGTTAA

Protein sequence

MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEERGDTGDTDEQS

Homology

[Close]

BLAST of MC08g2455 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-48
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEI +GVN++NL  D  KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIAT
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTV EILKNNG  VEKKI TSTVDIKDD+RGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

Query: 121 RGD 124
           + D
Sbjct: 121 KED 123

[Close]

BLAST of MC08g2455 vs. NCBI nr
Match: XP_022143001.1 (uncharacterized protein At2g34160-like [Momordica charantia])

HSP 1 Score: 248 bits (632), Expect = 1.72e-82
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT
Sbjct: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           RGDTGDTDEQS
Sbjct: 121 RGDTGDTDEQS 131

[Close]

BLAST of MC08g2455 vs. NCBI nr
Match: XP_008457716.1 (PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0061596.1 DNA/RNA-binding protein Alba-like protein [Cucumis melo var. makuwa] >TYJ97805.1 DNA/RNA-binding protein Alba-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (582), Expect = 7.25e-75
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIAT
Sbjct: 1   MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           RG+ GD DEQS
Sbjct: 121 RGEIGDADEQS 131

[Close]

BLAST of MC08g2455 vs. NCBI nr
Match: XP_023547053.1 (uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226 bits (576), Expect = 5.96e-74
Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGV+S+NLG D YKKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIAT
Sbjct: 1   MEEIVEGVDSINLGSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHDVVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGL VEKKI TSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           R +TGD DEQS
Sbjct: 121 RAETGDADEQS 131

[Close]

BLAST of MC08g2455 vs. NCBI nr
Match: XP_022946216.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >KAG7030395.1 hypothetical protein SDJN02_08742 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (576), Expect = 5.96e-74
Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGV+S+NLG D YKKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIAT
Sbjct: 1   MEEIVEGVDSMNLGSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHDVVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGL VEKKI TSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           R +TGD DEQS
Sbjct: 121 RAETGDADEQS 131

[Close]

BLAST of MC08g2455 vs. NCBI nr
Match: XP_004139317.1 (uncharacterized protein At2g34160 [Cucumis sativus] >KAE8651529.1 hypothetical protein Csa_019360 [Cucumis sativus])

HSP 1 Score: 226 bits (575), Expect = 8.47e-74
Identity = 119/131 (90.84%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIAT
Sbjct: 1   MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGL +EKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           RG+ G+ DEQS
Sbjct: 121 RGEIGEADEQS 131

[Close]

BLAST of MC08g2455 vs. ExPASy TrEMBL
Match: A0A6J1CNW3 (uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC111012990 PE=4 SV=1)

HSP 1 Score: 248 bits (632), Expect = 8.33e-83
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT
Sbjct: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           RGDTGDTDEQS
Sbjct: 121 RGDTGDTDEQS 131

[Close]

BLAST of MC08g2455 vs. ExPASy TrEMBL
Match: A0A5D3BH52 (DNA/RNA-binding protein Alba-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00150 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 3.51e-75
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIAT
Sbjct: 1   MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           RG+ GD DEQS
Sbjct: 121 RGEIGDADEQS 131

[Close]

BLAST of MC08g2455 vs. ExPASy TrEMBL
Match: A0A1S3C651 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103497344 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 3.51e-75
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIAT
Sbjct: 1   MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           RG+ GD DEQS
Sbjct: 121 RGEIGDADEQS 131

[Close]

BLAST of MC08g2455 vs. ExPASy TrEMBL
Match: A0A6J1G312 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111450368 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 2.89e-74
Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGV+S+NLG D YKKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIAT
Sbjct: 1   MEEIVEGVDSMNLGSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHDVVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGL VEKKI TSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           R +TGD DEQS
Sbjct: 121 RAETGDADEQS 131

[Close]

BLAST of MC08g2455 vs. ExPASy TrEMBL
Match: A0A6J1KJN4 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111493796 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 1.18e-73
Identity = 119/131 (90.84%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEIVEGV+S+NLG D YKKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIAT
Sbjct: 1   MEEIVEGVDSMNLGSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHDVVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGL VEKKI TSTVDIKDDSRGRPVQKAKIEI LGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIEIFLGKTENFDELMAAAAEE 120

Query: 121 RGDTGDTDEQS 131
           R +TGD DEQS
Sbjct: 121 RAETGDADEQS 131

[Close]

BLAST of MC08g2455 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-49
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEI +GVN++NL  D  KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIAT
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTV EILKNNG  VEKKI TSTVDIKDD+RGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

Query: 121 RGD 124
           + D
Sbjct: 121 KED 123

[Close]

BLAST of MC08g2455 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 192.2 bits (487), Expect = 2.6e-49
Identity = 104/131 (79.39%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 1   MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
           MEEI EGVN++NL  D  KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIAT
Sbjct: 1   MEEITEGVNNMNLAVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMAAAAEE 120
           VVTVAEILKNNG  VEKKI TSTVDIKDDSRGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEE 120

Query: 121 RGDTGDTDEQS 132
           + +  +  EQ+
Sbjct: 121 K-EAAEAQEQN 130

[Close]

BLAST of MC08g2455 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.0e-37
Identity = 75/97 (77.32%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 18  YKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEK 77
           +KKNRIQVSNTKKPLFFYVNLAKRY+QQHNEVELSALGMAI TVVT++EILKNNGL  EK
Sbjct: 35  HKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLATEK 94

Query: 78  KIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELM 115
           K+ TSTV +KD+++G+ VQKAKIEI+LGK++ FD L+
Sbjct: 95  KVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLV 131

The following BLAST results are available for this feature:

BLAST of MC08g2455 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	2.2e-48	82.11	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of MC08g2455 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143001.1	1.72e-82	100.00	uncharacterized protein At2g34160-like [Momordica charantia]	[more]
XP_008457716.1	7.25e-75	92.37	PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0061596.1 D...	[more]
XP_023547053.1	5.96e-74	91.60	uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946216.1	5.96e-74	91.60	uncharacterized protein At2g34160-like [Cucurbita moschata] >KAG7030395.1 hypoth...	[more]
XP_004139317.1	8.47e-74	90.84	uncharacterized protein At2g34160 [Cucumis sativus] >KAE8651529.1 hypothetical p...	[more]

BLAST of MC08g2455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNW3	8.33e-83	100.00	uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3BH52	3.51e-75	92.37	DNA/RNA-binding protein Alba-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C651	3.51e-75	92.37	uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103497344 P...	[more]
A0A6J1G312	2.89e-74	91.60	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KJN4	1.18e-73	90.84	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114937...	[more]

BLAST of MC08g2455 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34160.1	1.5e-49	82.11	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	2.6e-49	79.39	Alba DNA/RNA-binding protein	[more]
AT3G04620.1	3.0e-37	77.32	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 19..131 e-value: 2.4E-56 score: 190.6
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 20..115
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIRSF	PIRSF030333	UCP030333_Alba	coord: 1..131 e-value: 7.4E-62 score: 205.7
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 1..131
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 21..77 e-value: 5.8E-13 score: 48.5
None	No IPR available	PANTHER	PTHR31947:SF32	SUBFAMILY NOT NAMED	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2455.1	MC08g2455.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding