MC08g2370 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2370
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CCHC-type domain-containing protein
Location	MC08: 32500260 .. 32503895 (+)
RNA-Seq Expression	MC08g2370
Synteny	MC08g2370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAGGACAACGCCGCCGTCGCACCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCATTGGTCTCGAGATTGTCCCTCCTCCGCTCCTAATCCCGATTCCACTTTCAATTCTTCCAGACCTTCTTCCTCTTCTGGCGCTGCTGCTGCTGCGCCTTCGAAAGTTGCAGAGAAGCCCAAGAAGGCGCCCAGAACCAGGCCCAAGCTCACTCCCGAGCTACTTCTCTCTGAGGATGGCCTCGGTTACGTTCTTCGCCATTTTCCTCGCGCTTTCAAATATCGCGGCCGTGGACACGAGGTTAAGTTTCTCCATCCGATTCCTTTCCAATCCTTGCGAACGTTCTGGTATTTATGGGGTTTTGTTTGAATTATCTCAACATTTCTGCTCAAGGAATAAGAGGTTTGGAAAATCATTACTACTCTTCTGAGTCTGGCGCGTTTTTTAGCTGTCTTTGTTATGAACGTGGCTGGTGTAGGAAATTATGCGGTAGTTTGTAATTTCACTTCAGTTTACTGTCTTATTAGTAAAAGTTTGTAGTTGTTATATTCCTCTGATTTGCATTGACATATATATGATTAGAAACATTTTGATTTGCGAAGAAAGAGTTCTTTTGGATTTTTTTCGAGAGAGATCAGGCTGTTGGGAGCCAACCAAAAATCCCGCTGAACATCTGTCTTAGAGGGAACTAAAAGCAAAACTGTGAGAGACTCAAAATAGACGATATCACATCTTAATTTACCTTGATAGTTCAGTAGTAGTTTACCAGTTTGAAAGCTTGTTTCCACTCAATTATAATCATGTGTATTTCATCAACGCTGTGTTGTCTTCCTCTCATCCACTATCATTTTCTAATGATTTGATTCTTATGCTGATTGAATTATGCTTTTGATGGTCGTTTTGCAGGTCAGTGATTTGGAAAACTTTATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTACTACTCCTTCGAACATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTTAAGGTAAAAAATGTGCATGACCCCTGACTTTATATTATCTTTTATAATGAAGGTATAACAAAGGTGTACATATATGGCTGACTGGATTGGTATGTGTGTCAAACTACACAAGTTTTGCCTAATAACATAGCTAGCATCTGAACTAAACGCACTGCTCTTAGGAAACCATTGCACCAAAATAGACAGTGGATTATATTATGGTGCGGTATGCATAACAAACTCTAACTCTGTAATGTTTCAAATTAATCCTTGCCTATCGAACCAAATCAATTTTGAGCAAATTTGCTTATTATATGACATCTATCTCGCCTTCTTTGAAATATTTTTGAGCAGATGAGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGCGAGTCACCCACTGTAAATGAAGACGTCAATAATGAAACAGGTAAATTCTAGTACTCTCATTTATGAAAAGAGACGCATATCATTATTATCATAAGCTGTTTGATCGTGATGGAACTAGTGCAGCTATATGGTATCAAATTTTATAGTGTTTAGCAAGATGCGTGTTGTCCTCTAAGATGAATCCTAATTCTTCTTAAGCGCTATAATTATTTGACTCTAGCTCTATTTAGAAAATTCAAATTTGATTTAGATGATAAACTTGTAGTAAATTGAATTGTCAGAATAAATAAGCAAGAAATAATTATAAAAGAGAATAAATTAAAATTGAACATTTAATGCATCAATTTGGCGTTATGGCTCAACCTATCTAAGCTATCTAATAAGCTGGTTCGGATCAGTGAACTTAATTTTGCTCAATGATGGAAAATTATTGAACAGTTGTAGGTGGCCTTTGTTTTTAGCCCTTACTAACCTCCACCTACCATCACAGTTACTACCACCTCTATCACCTTCTCATCTTTCTTTCTTATATATACATATATTCGTACGCAGTTGTCAAAGGCTTTTTGATTAAGGCCATGTGCTTTTAAGTCATATTATGGTTTGATTTAAGCTATGAGATTTTAGGGGTTTGTTGTGTACACATTTGCCAAATGGAGCTTGGTTCTTAATATTTCCTCGTGCATGAATATATGTGACCCTCGCATGCTCAGTTTATTTCACACCAAGTAGTCAAGTGCTTGGAATGGTTATAACTTATATTGGATTGTGGTACATCCAAAGTTCTAGTAGTCATTATGTTGCACTTGTAATTTGGAAAAAATATATTGTGGTTTATGTTCTTTTTCATGGTTCTTAGTCAGGGCAACTGCTGCAAAGTTTTGCTTGTATTTATAGATTTTATGCTAATTTTCAGATTTTAGGGTTGGGGAATGGTTTGATATGTGTACTTGGCTCTGCGTATTTAGAAATGCAACCTAAAGAGTAAAATCCGATCCATTTGAATGTTTTTTTCTCTCATGTTCTAAACTATAATCTTAAAATATTCTGCGACTCTATAACTAATCATTATTTGGGTGTATCCCTTTTCTTGAACCTCAAACCCGTCTTCTAATGTTTGCAGAAGCCAAAGACTCGGAGGACTTATTTGATAATCCGGAAGAGGCTTCTTTGAGGAATAATGGTACTGATGACATGGAAGAAGACATGCTTCAGGAAATTTACGAGAAAGCTACTGAAGTAATGTCTTTCTCTGTTCACTATTTCTTTTAAAGCTTGGTTTACTTTCCATCCCTGCGATTGATATTGAAGTAGTTTTAGAAGGAAACCATCCCAATCCTTGAACTGAGTAAGGAGGAAATTTTACCATGAATCATAAACGTAGGTCTTAGGAAGTCATAATGAAGCAAACTAGTGCTTCCTCATTTCAGTCCAAAATTTTGTAGTTCAATTTTCCAAGTTGTCAGGTTGATTTTTTTATAATATTTTGATGCCCCATTGGATTCTACTTTGCTCTACAACTTATTCTATGAGGTGATCACTTTCTAATTATTGCTATATCTTTATATTCGGTCATGGAATAGTCATTCAATGACACGAAAAGAAAATGCTTGTTTTAGTATTGTTCTATAGATTGTACTACTGTGTCCTTAAGTTCTAAAGTAACTGTTGATGTAGTAGAAGATCAAGGTCTACTAAAATGAGACATCTTCCTGTGTTCTCTCTAATTTAACGATGGGTTTTGCTAACCGTGATCGTAGGAGCCTCTGCAGAACTTACAAAGTGATTCCCACACCATTGGGGAAACTATGGAAGGTGTGAGCAACCAAGAGCCAAATAGAAGCAATTCAAGTGAAACTCAGATCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGGGCTGCAAGCAAGGCCCGCTCCTTGCAGACTGCCTGATTCCTGTGATTGCCTGCCTTTTTGATTGATGGCAAGGTTATAATTACACTCAAAAGCTGTGGTCTTTGGCCAGTGAAGGCCCCAGACTTTTCTAAGTCTACTCGTTTTTAAAAGTTATTGTTAATCAACAGGGGTCTCATTGTAAATTAATCATTTTTAGATTAAATACTTTCACTTTTGCTTTTGGTTCAGTATTATACTTTCAACTTTGTTCATTAGATGACCATTTAAATATCTATTTACAAAATTTTAACACAAATAG

mRNA sequence

GAGAAGGACAACGCCGCCGTCGCACCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCATTGGTCTCGAGATTGTCCCTCCTCCGCTCCTAATCCCGATTCCACTTTCAATTCTTCCAGACCTTCTTCCTCTTCTGGCGCTGCTGCTGCTGCGCCTTCGAAAGTTGCAGAGAAGCCCAAGAAGGCGCCCAGAACCAGGCCCAAGCTCACTCCCGAGCTACTTCTCTCTGAGGATGGCCTCGGTTACGTTCTTCGCCATTTTCCTCGCGCTTTCAAATATCGCGGCCGTGGACACGAGGTTAATGATTTGGAAAACTTTATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTACTACTCCTTCGAACATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTTAAGATGAGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGCGAGTCACCCACTGTAAATGAAGACGTCAATAATGAAACAGAAGCCAAAGACTCGGAGGACTTATTTGATAATCCGGAAGAGGCTTCTTTGAGGAATAATGGTACTGATGACATGGAAGAAGACATGCTTCAGGAAATTTACGAGAAAGCTACTGAAGAGCCTCTGCAGAACTTACAAAGTGATTCCCACACCATTGGGGAAACTATGGAAGGTGTGAGCAACCAAGAGCCAAATAGAAGCAATTCAAGTGAAACTCAGATCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGGGCTGCAAGCAAGGCCCGCTCCTTGCAGACTGCCTGATTCCTGTGATTGCCTGCCTTTTTGATTGATGGCAAGGTTATAATTACACTCAAAAGCTGTGGTCTTTGGCCAGTGAAGGCCCCAGACTTTTCTAAGTCTACTCGTTTTTAAAAGTTATTGTTAATCAACAGGGGTCTCATTGTAAATTAATCATTTTTAGATTAAATACTTTCACTTTTGCTTTTGGTTCAGTATTATACTTTCAACTTTGTTCATTAGATGACCATTTAAATATCTATTTACAAAATTTTAACACAAATAG

Coding sequence (CDS)

GAGAAGGACAACGCCGCCGTCGCACCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCATTGGTCTCGAGATTGTCCCTCCTCCGCTCCTAATCCCGATTCCACTTTCAATTCTTCCAGACCTTCTTCCTCTTCTGGCGCTGCTGCTGCTGCGCCTTCGAAAGTTGCAGAGAAGCCCAAGAAGGCGCCCAGAACCAGGCCCAAGCTCACTCCCGAGCTACTTCTCTCTGAGGATGGCCTCGGTTACGTTCTTCGCCATTTTCCTCGCGCTTTCAAATATCGCGGCCGTGGACACGAGGTTAATGATTTGGAAAACTTTATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTACTACTCCTTCGAACATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTTAAGATGAGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGCGAGTCACCCACTGTAAATGAAGACGTCAATAATGAAACAGAAGCCAAAGACTCGGAGGACTTATTTGATAATCCGGAAGAGGCTTCTTTGAGGAATAATGGTACTGATGACATGGAAGAAGACATGCTTCAGGAAATTTACGAGAAAGCTACTGAAGAGCCTCTGCAGAACTTACAAAGTGATTCCCACACCATTGGGGAAACTATGGAAGGTGTGAGCAACCAAGAGCCAAATAGAAGCAATTCAAGTGAAACTCAGATCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGGGCTGCAAGCAAGGCCCGCTCCTTGCAGACTGCCTGA

Protein sequence

EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA

Homology

[Close]

BLAST of MC08g2370 vs. ExPASy Swiss-Prot
Match: Q91WA1 (TIMELESS-interacting protein OS=Mus musculus OX=10090 GN=Tipin PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 9.7e-06
Identity = 71/248 (28.63%), Postives = 96/248 (38.71%), Query Frame = 0


Query: 27  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLR 86
           P ++P  D     + P   SG+    P K     +   R  PKL    L SE GL   LR
Sbjct: 28  PPASPERDPA--DAEPEEGSGSGVPVPPK-----RTVKRNLPKLDATRLTSERGLP-ALR 87

Query: 87  HFPRAFKYRGRGHEVNDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGE 146
           H     K++G+GHE  DL+  I     W   + P   FE F+ +VE +   K V+  L  
Sbjct: 88  HVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKR 147

Query: 147 LRERVARGGDPTKWRESPTVNED-VNNETEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQ 206
           +R             + P V+ED VNN  E  ++              NG D        
Sbjct: 148 IR------------LDLPIVHEDFVNNNDEVGEA--------------NGPD-------- 207

Query: 207 EIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALE 266
                   +P     SDS             EP RS      +TEEQ+ R+E N+  ALE
Sbjct: 208 --VSATGFDPFLTSSSDSRKFA--------SEPTRS------LTEEQQQRIERNKQLALE 217

Query: 267 RAASKARS 274
           R  +K  S
Sbjct: 268 RRQAKLLS 217

[Close]

BLAST of MC08g2370 vs. ExPASy Swiss-Prot
Match: Q5F416 (TIMELESS-interacting protein OS=Gallus gallus OX=9031 GN=TIPIN PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 71/262 (27.10%), Postives = 100/262 (38.17%), Query Frame = 0


Query: 9   PPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRP 68
           PPT       PG    +   +  +PD    S    SSS A            K   R+ P
Sbjct: 30  PPT------SPGRGDAEWAQANGDPDGNQQSETKDSSSAAR-----------KAVKRSIP 89

Query: 69  KLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILPYYSFEHFV 128
           KL    L+SE GL   LRH     K++G+GHE  DL+  +     W   + P   F+ F+
Sbjct: 90  KLDANRLVSERGLP-ALRHMFDNVKFKGKGHEAEDLKTLLRHMEHWAHRLFPKLQFDDFI 149

Query: 129 HKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEE 188
            +VE +   K V+  L  +R             + P ++ED             F   E 
Sbjct: 150 DRVESLGNKKEVQTCLKRIR------------LDLPILHED-------------FTANEG 209

Query: 189 ASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQI 248
               +NG D             ATEE    + S S  +GE             +   T +
Sbjct: 210 GGGESNGLD------------MATEE----VHSFSGNVGEL-----------DSLPGTTL 221

Query: 249 TEEQRVRMEANRLKALERAASK 271
           TEEQ+ R++ NR  ALER  +K
Sbjct: 270 TEEQQQRIKRNRQLALERRQAK 221

[Close]

BLAST of MC08g2370 vs. ExPASy Swiss-Prot
Match: Q3ZCC4 (TIMELESS-interacting protein OS=Bos taurus OX=9913 GN=TIPIN PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04
Identity = 63/242 (26.03%), Postives = 96/242 (39.67%), Query Frame = 0


Query: 27  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLR 86
           P+S    D         S  GA    P K     +   R  PKL  E L+SE GL   LR
Sbjct: 29  PASPGREDGEGAEPEEESGRGAPVPVPPK-----RTVKRNIPKLNAERLISERGLP-ALR 88

Query: 87  HFPRAFKYRGRGHEVNDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGE 146
           H     K++G+GHE  DL+  I     W   + P   FE F+ +VE +   K V+  L  
Sbjct: 89  HVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVECLGNKKEVQTCLKR 148

Query: 147 LRERVARGGDPTKWRESPTVNEDV---NNETEAKDSEDL------------FDNPEEASL 206
           +R             + P ++ED    N+E E  +  D+            + + E AS 
Sbjct: 149 IR------------LDLPILHEDFVSNNDEVEENNGHDVTATELDHFLTNSYGSVEFASE 208

Query: 207 RNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEE 254
            +    + E+  ++   + A E     L S+S ++G  +   S   P+   S      EE
Sbjct: 209 SSRSLTEEEQQRIERNKQLALERRQAKLLSNSQSLGNDL---SVNTPSTQTSEAGSTGEE 249

[Close]

BLAST of MC08g2370 vs. ExPASy Swiss-Prot
Match: Q9BVW5 (TIMELESS-interacting protein OS=Homo sapiens OX=9606 GN=TIPIN PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 5.3e-04
Identity = 61/235 (25.96%), Postives = 98/235 (41.70%), Query Frame = 0


Query: 27  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLR 86
           P+S    D         S +GA    P K     +   R  PKL  + L+SE GL   LR
Sbjct: 29  PASPERQDGEGTEPDEESGNGAPVRVPPK-----RTVKRNIPKLDAQRLISERGLP-ALR 88

Query: 87  HFPRAFKYRGRGHEVNDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGE 146
           H     K++G+GHE  DL+  I     W   + P   FE F+ +VE + + K V+  L  
Sbjct: 89  HVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKR 148

Query: 147 LRERVARGGDPTKWRESPTVNEDV--NNETEAKDSE------DLFDNPEEASLRNNGTDD 206
           +R  +     P    +  + N++V  NNE +   +E      +L ++   AS  +    +
Sbjct: 149 IRLDL-----PILHEDFVSNNDEVAENNEHDVTSTELDPFLTNLSESEMFASELSRSLTE 208

Query: 207 MEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQR 254
            ++  ++   + A E     L S+S T+G  M       P      E    E+Q+
Sbjct: 209 EQQQRIERNKQLALERRQAKLLSNSQTLGNDM---LMNTPRAHTVEEVNTDEDQK 249

[Close]

BLAST of MC08g2370 vs. NCBI nr
Match: XP_022143008.1 (TIMELESS-interacting protein [Momordica charantia])

HSP 1 Score: 531 bits (1368), Expect = 7.89e-190
Identity = 276/277 (99.64%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP
Sbjct: 4   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 63

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEV+DLENFIGLYREWHSHILP
Sbjct: 64  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILP 123

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSE 180
           YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSE
Sbjct: 124 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSE 183

Query: 181 DLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR 240
           DLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR
Sbjct: 184 DLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR 243

Query: 241 SNSSETQITEEQRVRMEANRLKALERAASKARSLQTA 277
           SNSSETQITEEQRVRMEANRLKALERAASKARSLQTA
Sbjct: 244 SNSSETQITEEQRVRMEANRLKALERAASKARSLQTA 280

[Close]

BLAST of MC08g2370 vs. NCBI nr
Match: XP_004139395.1 (TIMELESS-interacting protein [Cucumis sativus] >KGN60764.1 hypothetical protein Csa_019321 [Cucumis sativus])

HSP 1 Score: 440 bits (1132), Expect = 7.16e-154
Identity = 235/280 (83.93%), Postives = 250/280 (89.29%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           EKDN AV  PTGC+KCGKPGHWSRDCPSSAPNP+ T NSS PS SS  AA  PSK  EKP
Sbjct: 2   EKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAA--PSKAVEKP 61

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHE+NDLEN IGLYREWHSHILP
Sbjct: 62  KKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILP 121

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNED---VNNETEAK 180
           YYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N+D   VNNE EAK
Sbjct: 122 YYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAK 181

Query: 181 DSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQE 240
           D +D+FDN EEASLRNNG DD+EEDMLQE+YEKATEEPLQN QSDS TIG TMEGV+NQE
Sbjct: 182 DPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQE 241

Query: 241 PNRSNSSET-QITEEQRVRMEANRLKALERAASKARSLQT 276
           P  SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Sbjct: 242 PKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPT 279

[Close]

BLAST of MC08g2370 vs. NCBI nr
Match: KAG6599343.1 (TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030333.1 TIMELESS-interacting protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 440 bits (1131), Expect = 8.81e-154
Identity = 237/281 (84.34%), Postives = 250/281 (88.97%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           +KDNAAVA PTGCYKCGKPGHWSRDCPSSAPNP    NSSRP SSS  A AAPSKVAEKP
Sbjct: 2   DKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSRPPSSS--APAAPSKVAEKP 61

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE++DLEN IGLYREWHSHILP
Sbjct: 62  KKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILP 121

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNE---DVNNETEAK 180
           YY FEHFVHKVEQVAATKRVKM LGELRE+VARGGDPTKWRESP VN+   D+NNE EAK
Sbjct: 122 YYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAK 181

Query: 181 DSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEE-PLQNLQSDSHTIGETMEGVSNQ 240
           DSE LFDN EEAS +NNG DD+EEDMLQE+YEKATEE PL NLQSDS TIGETMEGV NQ
Sbjct: 182 DSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ 241

Query: 241 EPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA 277
           EPN SNS+ET +TE+QR RMEANRLKALERAA+KARS  TA
Sbjct: 242 EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA 276

[Close]

BLAST of MC08g2370 vs. NCBI nr
Match: XP_008456510.1 (PREDICTED: TIMELESS-interacting protein [Cucumis melo] >KAA0063565.1 TIMELESS-interacting protein [Cucumis melo var. makuwa] >TYJ97891.1 TIMELESS-interacting protein [Cucumis melo var. makuwa])

HSP 1 Score: 440 bits (1131), Expect = 1.13e-153
Identity = 236/283 (83.39%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           +KDN A+A PTGCYKCGKPGHWSRDCPSSAPNP+ T NSS+P  SS  A AAPSK  EKP
Sbjct: 2   DKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSS--APAAPSKAVEKP 61

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE++DLEN IGLYREWHSHILP
Sbjct: 62  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILP 121

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNED--VNNETEAKD 180
           YYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N+D  VNNE EAKD
Sbjct: 122 YYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKD 181

Query: 181 SEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEP 240
            E +FDNPEEASLRNNG DD+EEDMLQE+YEKATEEPLQN QSDS T G TMEGV+NQEP
Sbjct: 182 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEP 241

Query: 241 NR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT 276
           N+    SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Sbjct: 242 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLAT 282

[Close]

BLAST of MC08g2370 vs. NCBI nr
Match: XP_038889611.1 (TIMELESS-interacting protein [Benincasa hispida])

HSP 1 Score: 434 bits (1116), Expect = 3.12e-151
Identity = 236/292 (80.82%), Postives = 253/292 (86.64%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSS----------RPSSSSG--- 60
           EKDNAAVA PTGCYKCGKPGHWSRDCPSSAPNP+ T NSS           P+S+S    
Sbjct: 2   EKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSSDCPSSAPNPNPTSNSSRPP 61

Query: 61  --AAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLE 120
             +A AAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPR FKYRGRGHE++DL 
Sbjct: 62  FSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRVFKYRGRGHEISDLG 121

Query: 121 NFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPT 180
           N IGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P 
Sbjct: 122 NLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPI 181

Query: 181 VNED-VNNETEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSH 240
           +N+D VNNE EAKD E +FDN EEA LRNNG DD+EEDMLQE+YEKATEEP QN+QSDS 
Sbjct: 182 LNDDDVNNEKEAKDPEGIFDNQEEA-LRNNGADDIEEDMLQEVYEKATEEPSQNVQSDSF 241

Query: 241 TIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQT 276
           TIGET+EGV+NQEP  SNSSETQ+TEEQR RMEANRLKALERAA+KARSL T
Sbjct: 242 TIGETIEGVANQEPKISNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT 292

[Close]

BLAST of MC08g2370 vs. ExPASy TrEMBL
Match: A0A6J1CPN9 (TIMELESS-interacting protein OS=Momordica charantia OX=3673 GN=LOC111012996 PE=3 SV=1)

HSP 1 Score: 531 bits (1368), Expect = 3.82e-190
Identity = 276/277 (99.64%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP
Sbjct: 4   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 63

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEV+DLENFIGLYREWHSHILP
Sbjct: 64  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILP 123

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSE 180
           YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSE
Sbjct: 124 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSE 183

Query: 181 DLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR 240
           DLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR
Sbjct: 184 DLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR 243

Query: 241 SNSSETQITEEQRVRMEANRLKALERAASKARSLQTA 277
           SNSSETQITEEQRVRMEANRLKALERAASKARSLQTA
Sbjct: 244 SNSSETQITEEQRVRMEANRLKALERAASKARSLQTA 280

[Close]

BLAST of MC08g2370 vs. ExPASy TrEMBL
Match: A0A0A0LI96 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009510 PE=3 SV=1)

HSP 1 Score: 440 bits (1132), Expect = 3.47e-154
Identity = 235/280 (83.93%), Postives = 250/280 (89.29%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           EKDN AV  PTGC+KCGKPGHWSRDCPSSAPNP+ T NSS PS SS  AA  PSK  EKP
Sbjct: 2   EKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAA--PSKAVEKP 61

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHE+NDLEN IGLYREWHSHILP
Sbjct: 62  KKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILP 121

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNED---VNNETEAK 180
           YYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N+D   VNNE EAK
Sbjct: 122 YYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAK 181

Query: 181 DSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQE 240
           D +D+FDN EEASLRNNG DD+EEDMLQE+YEKATEEPLQN QSDS TIG TMEGV+NQE
Sbjct: 182 DPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQE 241

Query: 241 PNRSNSSET-QITEEQRVRMEANRLKALERAASKARSLQT 276
           P  SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Sbjct: 242 PKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPT 279

[Close]

BLAST of MC08g2370 vs. ExPASy TrEMBL
Match: A0A5D3BGW4 (TIMELESS-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001060 PE=3 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 5.48e-154
Identity = 236/283 (83.39%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           +KDN A+A PTGCYKCGKPGHWSRDCPSSAPNP+ T NSS+P  SS  A AAPSK  EKP
Sbjct: 2   DKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSS--APAAPSKAVEKP 61

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE++DLEN IGLYREWHSHILP
Sbjct: 62  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILP 121

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNED--VNNETEAKD 180
           YYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N+D  VNNE EAKD
Sbjct: 122 YYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKD 181

Query: 181 SEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEP 240
            E +FDNPEEASLRNNG DD+EEDMLQE+YEKATEEPLQN QSDS T G TMEGV+NQEP
Sbjct: 182 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEP 241

Query: 241 NR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT 276
           N+    SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Sbjct: 242 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLAT 282

[Close]

BLAST of MC08g2370 vs. ExPASy TrEMBL
Match: A0A1S3C4P4 (TIMELESS-interacting protein OS=Cucumis melo OX=3656 GN=LOC103496437 PE=3 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 5.48e-154
Identity = 236/283 (83.39%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           +KDN A+A PTGCYKCGKPGHWSRDCPSSAPNP+ T NSS+P  SS  A AAPSK  EKP
Sbjct: 2   DKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSS--APAAPSKAVEKP 61

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE++DLEN IGLYREWHSHILP
Sbjct: 62  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILP 121

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNED--VNNETEAKD 180
           YYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N+D  VNNE EAKD
Sbjct: 122 YYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKD 181

Query: 181 SEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEP 240
            E +FDNPEEASLRNNG DD+EEDMLQE+YEKATEEPLQN QSDS T G TMEGV+NQEP
Sbjct: 182 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEP 241

Query: 241 NR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT 276
           N+    SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Sbjct: 242 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLAT 282

[Close]

BLAST of MC08g2370 vs. ExPASy TrEMBL
Match: A0A6J1G4B9 (TIMELESS-interacting protein OS=Cucurbita moschata OX=3662 GN=LOC111450673 PE=3 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 2.44e-151
Identity = 236/282 (83.69%), Postives = 249/282 (88.30%), Query Frame = 0


Query: 1   EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKP 60
           +KDNAAVA PTGCYKCGKPGHWSRDCPSSAPNP    NSS P SSS  A AAPSKVAEKP
Sbjct: 2   DKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSS--APAAPSKVAEKP 61

Query: 61  KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSHILP 120
           KKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE++DLEN IGLYREWHSHILP
Sbjct: 62  KKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILP 121

Query: 121 YYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNE---DVNNETEAK 180
           YY FEHFVHKVEQVAATKRVKM LGELRE+VARGGDPTKWRESP VN+   D+NNE EAK
Sbjct: 122 YYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAK 181

Query: 181 DSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEE-PLQNLQSDSHTIGETMEGVSNQ 240
           DSE LFDN EEAS +NNG DD+EEDMLQE+YEKATEE PL NLQSDS TIGETMEGV NQ
Sbjct: 182 DSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ 241

Query: 241 E-PNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA 277
           E PN SNS+ET +TE+QR RMEANRLKALERAA+KARS  TA
Sbjct: 242 EEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA 277

[Close]

BLAST of MC08g2370 vs. TAIR 10
Match: AT3G02820.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 225.7 bits (574), Expect = 4.5e-59
Identity = 147/286 (51.40%), Postives = 183/286 (63.99%), Query Frame = 0


Query: 10  PTGCYKCGKPGHWSRDCPSSAP--NPDSTFNSSRP----------SSSSGAAAAAPSKVA 69
           PTGC+KCG+PGHWSRDCPSSAP    +S  +SS P          SSS    + AP   A
Sbjct: 5   PTGCFKCGRPGHWSRDCPSSAPVAGNNSVSSSSAPSQIPNNEFQRSSSKSGTSIAP---A 64

Query: 70  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVNDLENFIGLYREWHSH 129
            K  K    RPKLTPELLLSEDGLGYVLR+FP++FKYRGRG EV+DL N I LY EWH+H
Sbjct: 65  PKVTKTRVQRPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHTH 124

Query: 130 ILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN----EDVNNE 189
           +LPYYSF+HFVHKV+QVA+TKRVK  + ELRERVA G DP K  E    N    +D + +
Sbjct: 125 LLPYYSFDHFVHKVQQVASTKRVKNCINELRERVASGVDPNKLYEKQEENTVPSDDQDMD 184

Query: 190 TEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPL--QNLQSDSHTIGETME 249
             + D E++   P ++   +   D  E+ ML EI++ A++ P   QN+   S     T E
Sbjct: 185 QPSHDEENI---PSKSVDADTNADAFEDSMLNEIFDNASKLPSDEQNMDKSSEL---TEE 244

Query: 250 GVSNQEPNRSNSSE--TQITEEQRVRMEANRLKALERAASKARSLQ 276
             +  E NR  + E    I+EEQRVRMEANRLKALERA ++ +  Q
Sbjct: 245 QRARMEANRLKAMEKAQNISEEQRVRMEANRLKALERAKARLQPNQ 281

[Close]

BLAST of MC08g2370 vs. TAIR 10
Match: AT3G42860.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 0


Query: 13  CYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSG 48
           C+KCGKPGHWSRDC + + NP       + SSSSG
Sbjct: 270 CFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSG 304

The following BLAST results are available for this feature:

BLAST of MC08g2370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91WA1	9.7e-06	28.63	TIMELESS-interacting protein OS=Mus musculus OX=10090 GN=Tipin PE=1 SV=2	[more]
Q5F416	1.1e-04	27.10	TIMELESS-interacting protein OS=Gallus gallus OX=9031 GN=TIPIN PE=2 SV=1	[more]
Q3ZCC4	1.8e-04	26.03	TIMELESS-interacting protein OS=Bos taurus OX=9913 GN=TIPIN PE=2 SV=1	[more]
Q9BVW5	5.3e-04	25.96	TIMELESS-interacting protein OS=Homo sapiens OX=9606 GN=TIPIN PE=1 SV=2	[more]

BLAST of MC08g2370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143008.1	7.89e-190	99.64	TIMELESS-interacting protein [Momordica charantia]	[more]
XP_004139395.1	7.16e-154	83.93	TIMELESS-interacting protein [Cucumis sativus] >KGN60764.1 hypothetical protein ...	[more]
KAG6599343.1	8.81e-154	84.34	TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_008456510.1	1.13e-153	83.39	PREDICTED: TIMELESS-interacting protein [Cucumis melo] >KAA0063565.1 TIMELESS-in...	[more]
XP_038889611.1	3.12e-151	80.82	TIMELESS-interacting protein [Benincasa hispida]	[more]

BLAST of MC08g2370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPN9	3.82e-190	99.64	TIMELESS-interacting protein OS=Momordica charantia OX=3673 GN=LOC111012996 PE=3...	[more]
A0A0A0LI96	3.47e-154	83.93	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009510 P...	[more]
A0A5D3BGW4	5.48e-154	83.39	TIMELESS-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C4P4	5.48e-154	83.39	TIMELESS-interacting protein OS=Cucumis melo OX=3656 GN=LOC103496437 PE=3 SV=1	[more]
A0A6J1G4B9	2.44e-151	83.69	TIMELESS-interacting protein OS=Cucurbita moschata OX=3662 GN=LOC111450673 PE=3 ...	[more]

BLAST of MC08g2370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02820.1	4.5e-59	51.40	zinc knuckle (CCHC-type) family protein	[more]
AT3G42860.1	1.4e-04	57.14	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 12..28 e-value: 7.4E-7 score: 38.8
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 12..28 e-value: 1.5E-8 score: 34.3
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 13..28 score: 11.581206
None	No IPR available	GENE3D	4.10.60.10		coord: 9..70 e-value: 4.6E-10 score: 41.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	PANTHER	PTHR13220:SF11	TIMELESS-INTERACTING PROTEIN	coord: 9..275
IPR012923	Chromosome segregation in meiosis protein 3	PFAM	PF07962	Swi3	coord: 69..150 e-value: 3.2E-22 score: 78.3
IPR040038	TIPIN/Csm3/Swi3	PANTHER	PTHR13220	TIMELESS INTERACTING-RELATED	coord: 9..275
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 9..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2370.1	MC08g2370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0000076	DNA replication checkpoint signaling
biological_process	GO:0043111	replication fork arrest
biological_process	GO:0048478	replication fork protection
cellular_component	GO:0031298	replication fork protection complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding