MC08g2345 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2345
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Alba domain-containing protein
Location	MC08: 32273832 .. 32275840 (+)
RNA-Seq Expression	MC08g2345
Synteny	MC08g2345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGAACTAACTTCCATTTCTCCATCCAATCAAAGGCTGCCACGTTTCACCTTCCCGCTCTCCCGCCCTATAAAATCCATCTTCTTAACGACTTCCAGCTAGTTTTCCGAGCCCCAACCCCTTCCAATTTTTCCCGCTCCTGAGATTTTCCCGAGAAAATTGCCAGAGAAAATTTTCTGTTTGAGCAGGGAGAGAGAGAGAGAGTAGAAACAGCGAGGTGTGAAATCAAGGAATGGCGACGATTGCAGTATCGGGAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCAAACACCAAGAAACCACTATTCTTCTACGTTAACCTCGCTAAGGTATACATAACAGATTCTCTAATTATTTGATTCTTTGATTCTTTGATTCTTTGATTATTTGATTGGATTATAATTCGGGAGAATCGCGATTTCGTTTTGTGTTCTTTTGGTTCTCGATAAATGAAATGGAAATGTGCATGAACTATGAACTATCCATGGTGATTTGTAGAATTTGAACAAATTTATTTGCACAATTCGTCTGTTTTAGAATTTGAACGAGAAATCTTCCGCAATTCCTAATTCGATACCGATTCTAAATCATCTTGCTCTCTGTTTGCCCTAAATGTAATAATCTAAAATCATCCCCTTTCACCGATCTTCCATTTCGATGAGATCGATATTCGAGACAACAGTTTTTTACGTGCTTGTTATTGTTCTTGATTCAGAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCCCTGGGAATGGGTAAACTTTTTTTTCTCTTTTCCAAAGATCTCTTTTTCTGATATCGATATATCGTCCAGAAATGGCATCTGACGAATTTTTGGTTTTCTTGGCTCGAATTCTTTGCATCGTTACAGCAATCACTACTGTTGTCACAATTGCGGAGATTCTAAAGAACAATGGGTTGGCTACAGAGAAGAGTAATTAACACTATTGTCTCTTCGTTTTCAATGCTAATTTCTGTTCCATTCATTCACATTATCTATGGTGATACGGTGATTACTGATAACGCATGATTTTGTTATGAAACAGAAGTTTTGACTTCTACAGTTGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGGTAAGTTCAATCTTTTATCTAATTTGCCATAAGTGGTAAAATAAATAAATAACTCTTGATCAGTTAAGTTATTAACATTCTTATATGGGATCTGAGATTATTATTTGGGTATGTTCTGTTCTTCATAGTTCGATTTGTACATTTTTATAGCTTAATTCTGAGTGTCTTCTCGTTTGAATTTTATAAAATCCATCAGTTGTTTTGAACAAACATAGCTTGATAATCTAGTTTTAATAGTGATTTTGATTCTGTCATGGCAGTGATATACTAGTGAAAAATGATTTTCGCTCCAAAACATGACTATAATATTCAATTTGATGAAGTTGAAAGATATGCATCATTTCACAGCTCATAATCTGTGTAGACCAAGGATTTGTTTCTTGTGGAATCTGAAATTCTTTTTTGTTTGTTTTTTCATTCTGATTTTGATAGATTGAGATTGTTCTGGGGAAGTCTGAGAAATTTGATTCTCTGATGACTGCGGCCACAGCTGCTGCGCCAGAGGCAGCTGCTGAAGAGAAAAAGGCAGAGGAAAGCAAGGAGCAGCCGGAGCAGTAGGGGGAGGAGAGGGGACATTTTGAAGATGTTACATTGTTGTAGTTTAAGAATATCACAAATGCAATATTATAGGATAGGGGATTTTGATTTTGAATTGCTCTCTTTTCTAGTTTCTTTTTTTTGGGACAGTTACAGTTTTCAATGAGATGCCATGCCATCACCAAAAAGACAAAGAAAAAAAAAAAAAAACCTTTCTTCTCTATCAAGTGTGTGTTGAGAAGGGAGCCTACTGTCTGTGTTTGCATTTGTTAGCTTCATGGTGATCTAATGAACTGATAAAAGGATGCCTCATCTTGAATTTTCTTTTCTAATCTTCATTCTC

mRNA sequence

CAATGAACTAACTTCCATTTCTCCATCCAATCAAAGGCTGCCACGTTTCACCTTCCCGCTCTCCCGCCCTATAAAATCCATCTTCTTAACGACTTCCAGCTAGTTTTCCGAGCCCCAACCCCTTCCAATTTTTCCCGCTCCTGAGATTTTCCCGAGAAAATTGCCAGAGAAAATTTTCTGTTTGAGCAGGGAGAGAGAGAGAGAGTAGAAACAGCGAGGTGTGAAATCAAGGAATGGCGACGATTGCAGTATCGGGAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCAAACACCAAGAAACCACTATTCTTCTACGTTAACCTCGCTAAGAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCCCTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTAAAGAACAATGGGTTGGCTACAGAGAAGAAAGTTTTGACTTCTACAGTTGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAATTTGATTCTCTGATGACTGCGGCCACAGCTGCTGCGCCAGAGGCAGCTGCTGAAGAGAAAAAGGCAGAGGAAAGCAAGGAGCAGCCGGAGCAGTAGGGGGAGGAGAGGGGACATTTTGAAGATGTTACATTGTTGTAGTTTAAGAATATCACAAATGCAATATTATAGGATAGGGGATTTTGATTTTGAATTGCTCTCTTTTCTAGTTTCTTTTTTTTGGGACAGTTACAGTTTTCAATGAGATGCCATGCCATCACCAAAAAGACAAAGAAAAAAAAAAAAAAACCTTTCTTCTCTATCAAGTGTGTGTTGAGAAGGGAGCCTACTGTCTGTGTTTGCATTTGTTAGCTTCATGGTGATCTAATGAACTGATAAAAGGATGCCTCATCTTGAATTTTCTTTTCTAATCTTCATTCTC

Coding sequence (CDS)

ATGGCGACGATTGCAGTATCGGGAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCAAACACCAAGAAACCACTATTCTTCTACGTTAACCTCGCTAAGAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCCCTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTAAAGAACAATGGGTTGGCTACAGAGAAGAAAGTTTTGACTTCTACAGTTGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAATTTGATTCTCTGATGACTGCGGCCACAGCTGCTGCGCCAGAGGCAGCTGCTGAAGAGAAAAAGGCAGAGGAAAGCAAGGAGCAGCCGGAGCAGTAG

Protein sequence

MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAAAEEKKAEESKEQPEQ

Homology

[Close]

BLAST of MC08g2345 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-37
Identity = 84/114 (73.68%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 9   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 68
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 69  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAAAE 123
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA     +A A+
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDAEAQ 127

[Close]

BLAST of MC08g2345 vs. NCBI nr
Match: XP_022143158.1 (uncharacterized protein At2g34160 [Momordica charantia])

HSP 1 Score: 241 bits (615), Expect = 9.06e-80
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIA 60
           MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIA
Sbjct: 1   MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIA 60

Query: 61  EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAA 120
           EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAA
Sbjct: 61  EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAA 120

Query: 121 AEEKKAEESKEQPEQ 135
           AEEKKAEESKEQPEQ
Sbjct: 121 AEEKKAEESKEQPEQ 135

[Close]

BLAST of MC08g2345 vs. NCBI nr
Match: XP_038877259.1 (uncharacterized protein At2g34160-like [Benincasa hispida])

HSP 1 Score: 213 bits (541), Expect = 2.25e-68
Identity = 128/144 (88.89%), Postives = 129/144 (89.58%), Query Frame = 0


Query: 1   MATIAVSGA--TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60
           MATIAVSGA  TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 1   MATIAVSGAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60

Query: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPE 120
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA  PE
Sbjct: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAV-PE 120

Query: 121 ----------AAAEEKKAEESKEQ 132
                     AA EEKKAEE+KEQ
Sbjct: 121 VVETVATGAAAAEEEKKAEENKEQ 143

[Close]

BLAST of MC08g2345 vs. NCBI nr
Match: XP_004139384.1 (uncharacterized protein At2g34160 [Cucumis sativus])

HSP 1 Score: 212 bits (540), Expect = 3.20e-68
Identity = 126/140 (90.00%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 2   ATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 61
           ATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 3   ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 62

Query: 62  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA---- 121
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA    
Sbjct: 63  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPET 122

Query: 122 --AAPEAAAEEKKAEESKEQ 132
             A   AA EEKKAEESKE+
Sbjct: 123 VVAVAAAAEEEKKAEESKEE 142

[Close]

BLAST of MC08g2345 vs. NCBI nr
Match: XP_008456222.1 (PREDICTED: uncharacterized protein At2g34160 [Cucumis melo] >KAA0063590.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa] >TYK18437.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (538), Expect = 6.24e-68
Identity = 125/141 (88.65%), Postives = 127/141 (90.07%), Query Frame = 0


Query: 1   MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60
           MATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV
Sbjct: 1   MATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60

Query: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA--- 120
           TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA   
Sbjct: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120

Query: 121 ---AAPEAAAEEKKAEESKEQ 132
              A   A  EEKKAEE+KE+
Sbjct: 121 TVVAVAAAGEEEKKAEENKEE 141

[Close]

BLAST of MC08g2345 vs. NCBI nr
Match: KAG6586319.1 (hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209 bits (533), Expect = 3.16e-67
Identity = 123/133 (92.48%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 3   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 62
           TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI
Sbjct: 4   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 63

Query: 63  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAAA- 122
           LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT  A  AA  
Sbjct: 64  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAAAGG 123

Query: 123 --EEKKA-EESKE 131
             E+KKA EESKE
Sbjct: 124 GEEKKKAGEESKE 136

[Close]

BLAST of MC08g2345 vs. ExPASy TrEMBL
Match: A0A6J1CQ10 (uncharacterized protein At2g34160 OS=Momordica charantia OX=3673 GN=LOC111013094 PE=4 SV=1)

HSP 1 Score: 241 bits (615), Expect = 4.39e-80
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIA 60
           MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIA
Sbjct: 1   MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIA 60

Query: 61  EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAA 120
           EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAA
Sbjct: 61  EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAA 120

Query: 121 AEEKKAEESKEQPEQ 135
           AEEKKAEESKEQPEQ
Sbjct: 121 AEEKKAEESKEQPEQ 135

[Close]

BLAST of MC08g2345 vs. ExPASy TrEMBL
Match: A0A0A0LG69 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 1.55e-68
Identity = 126/140 (90.00%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 2   ATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 61
           ATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 3   ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 62

Query: 62  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA---- 121
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA    
Sbjct: 63  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPET 122

Query: 122 --AAPEAAAEEKKAEESKEQ 132
             A   AA EEKKAEESKE+
Sbjct: 123 VVAVAAAAEEEKKAEESKEE 142

[Close]

BLAST of MC08g2345 vs. ExPASy TrEMBL
Match: A0A5D3D4G4 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001630 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 3.02e-68
Identity = 125/141 (88.65%), Postives = 127/141 (90.07%), Query Frame = 0


Query: 1   MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60
           MATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV
Sbjct: 1   MATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60

Query: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA--- 120
           TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA   
Sbjct: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120

Query: 121 ---AAPEAAAEEKKAEESKEQ 132
              A   A  EEKKAEE+KE+
Sbjct: 121 TVVAVAAAGEEEKKAEENKEE 141

[Close]

BLAST of MC08g2345 vs. ExPASy TrEMBL
Match: A0A1S3C2U1 (uncharacterized protein At2g34160 OS=Cucumis melo OX=3656 GN=LOC103496224 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 3.02e-68
Identity = 125/141 (88.65%), Postives = 127/141 (90.07%), Query Frame = 0


Query: 1   MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60
           MATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV
Sbjct: 1   MATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60

Query: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA--- 120
           TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA   
Sbjct: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120

Query: 121 ---AAPEAAAEEKKAEESKEQ 132
              A   A  EEKKAEE+KE+
Sbjct: 121 TVVAVAAAGEEEKKAEENKEE 141

[Close]

BLAST of MC08g2345 vs. ExPASy TrEMBL
Match: A0A6J1HLL6 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111465325 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 4.83e-67
Identity = 123/133 (92.48%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 3   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 62
           TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI
Sbjct: 39  TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 98

Query: 63  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAAA- 122
           LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT AA   A  
Sbjct: 99  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEATAGG 158

Query: 123 --EEKKA-EESKE 131
             E+KKA EESKE
Sbjct: 159 GEEKKKAGEESKE 171

[Close]

BLAST of MC08g2345 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 178.3 bits (451), Expect = 4.1e-45
Identity = 101/134 (75.37%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 2   ATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAE 61
           AT   +   ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+E
Sbjct: 24  ATTTTTATVETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISE 83

Query: 62  ILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT---AAAPE 121
           ILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGKS+KFDSL+   T       E
Sbjct: 84  ILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVPPVTNGKTPEEE 143

Query: 122 AAAEEKKAEESKEQ 133
           A+AE + + E++E+
Sbjct: 144 ASAETEASVEAQEE 157

[Close]

BLAST of MC08g2345 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 160.6 bits (405), Expect = 8.7e-40
Identity = 89/124 (71.77%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 9   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 68
           A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG 
Sbjct: 14  AVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGF 73

Query: 69  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAAAEEKKAEE 128
           A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD LM AA         EEK+A E
Sbjct: 74  AVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAAN--------EEKEAAE 129

Query: 129 SKEQ 133
           ++EQ
Sbjct: 134 AQEQ 129

[Close]

BLAST of MC08g2345 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 157.5 bits (397), Expect = 7.4e-39
Identity = 84/114 (73.68%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 9   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 68
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 69  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAAAE 123
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA     +A A+
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDAEAQ 127

The following BLAST results are available for this feature:

BLAST of MC08g2345 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	1.0e-37	73.68	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of MC08g2345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143158.1	9.06e-80	100.00	uncharacterized protein At2g34160 [Momordica charantia]	[more]
XP_038877259.1	2.25e-68	88.89	uncharacterized protein At2g34160-like [Benincasa hispida]	[more]
XP_004139384.1	3.20e-68	90.00	uncharacterized protein At2g34160 [Cucumis sativus]	[more]
XP_008456222.1	6.24e-68	88.65	PREDICTED: uncharacterized protein At2g34160 [Cucumis melo] >KAA0063590.1 alba D...	[more]
KAG6586319.1	3.16e-67	92.48	hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC08g2345 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQ10	4.39e-80	100.00	uncharacterized protein At2g34160 OS=Momordica charantia OX=3673 GN=LOC111013094...	[more]
A0A0A0LG69	1.55e-68	90.00	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 S...	[more]
A0A5D3D4G4	3.02e-68	88.65	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C2U1	3.02e-68	88.65	uncharacterized protein At2g34160 OS=Cucumis melo OX=3656 GN=LOC103496224 PE=4 S...	[more]
A0A6J1HLL6	4.83e-67	92.48	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114653...	[more]

BLAST of MC08g2345 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04620.1	4.1e-45	75.37	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	8.7e-40	71.77	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	7.4e-39	73.68	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIRSF	PIRSF030333	UCP030333_Alba	coord: 1..132 e-value: 4.9E-63 score: 209.5
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 7..130
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 16..78 e-value: 2.6E-13 score: 49.6
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 14..130 e-value: 2.4E-53 score: 180.9
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 15..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..135
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 7..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2345.1	MC08g2345.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048235	pollen sperm cell differentiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding