MC08g2342 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2342
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	histone H1-like
Location	MC08: 32252014 .. 32253456 (+)
RNA-Seq Expression	MC08g2342
Synteny	MC08g2342

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCTTAGGAAGCGAAGTGAAAAACACATCTAAAAATTCCATTTTCAACCTTCAACCTGCCCATCCATATCCCTTCTTAACCCGTACTTTCAATACCGACCGTCGACAAATCCCAGATCCAAGGGCTCAAATTCAAATTTTCACGAGGCTCTCGATCCGCGTCAAACGCCTTTCGACCAATCATATCGCAGCAGTCCGATTCCACTTTCGTTATATAAACTGCCCTCAACCGTCTCTCTCCTCACCGAATTTTCTCTCTCTAAAATCCCATCGTCCTCTCTCTCTCTCTCTCTCTCTTCCGCATACGTTTCAAGTTCAAGCTTCTGGTTAATTGCGATCATGGCTTCCGCTGCAGATCCGATTGTACCTTCCGACGCGCCGGCCGCCGACGCGGCGGAGGTTCTGACTGTGGCGAACGATGCGAAGCCTAAGAAGGCCGCGTCCTCGAAAGCTTCCAAGGCTAAGAAACCATCGGGCGCGAAGAGGCCGAAATCTTCACCGACTCATCCTCCTTTCTTTCAGGTAAGAGTGATTGAATTCTGTTTAACTCGCAAGTGATTATCAACTCCGTTTTTATGTTCTGGTCTGATCGAATTTTGAAATTGTGTGTTTCAGATGATTAGCGAGGCGATTGTATCGCTGAAGGAGAGGACAGGCTCGAGTCAGTACGCCATTACGAAGTTCAGTGAAGAGAAGCACAAACAGCTGCCGTCGAATTTCCGGAAGCTCTTGCTTGTTCATCTGAAGAAATTAGTCGCCGCTGATAAACTTGTTAAGGTGAAGAACTCCTACAAGCTTCCTTCCGCTCGCTCGATTCAGGCGAAAGCCGCAGCGCCTGTCGCTGCCAAGAAGCCAGCTAGTTCAAAGTTGAAGGCAGCTGCGAGTGTGAAGAAGAAGGCCGCCGTCGTCAAACCGAAGGCTAAAACTGCAGTGAAACCTAAGCCCAAGGCCGTGGTTAAGCCGAAGACGATCTCCAAATCCAAGGTTGTTGCAAAGCCGAAGGCGGCGGCGGCGGCGGCCAAGCCTAAGGCGGCGGCGAAAGTTAAAGCTGCTGCGAAGGCTAAGCCCGCTGCAAGGCCCGCGAAAGTGGCGAAAACATTGACGCAAACATCACCGGGAAAGAGAGCTGCACCGGCAGCGAAGGCGAAGAAGGTAGCCGCGAAGAAGCCGAAGACTGTAAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATGAACGTAGGTTTGATTGAATTTAGGGTTTGTTACTTACTGATCCTCTCTATCTCTCGTAGCCATGTAAATTAGGGGAAATGAGATGCAATCGTTGCAATACACTATTTTTATTAATTCAGTTTGATAAATTCAAGGGTTTATCAAATCAATCTTCAGAGAGTGATTTTCGATATGGCTTGAGATTCTGGAAAATTTGTAGGAATATAAAATGAAGCTTTGG

mRNA sequence

GGCCTTAGGAAGCGAAGTGAAAAACACATCTAAAAATTCCATTTTCAACCTTCAACCTGCCCATCCATATCCCTTCTTAACCCGTACTTTCAATACCGACCGTCGACAAATCCCAGATCCAAGGGCTCAAATTCAAATTTTCACGAGGCTCTCGATCCGCGTCAAACGCCTTTCGACCAATCATATCGCAGCAGTCCGATTCCACTTTCGTTATATAAACTGCCCTCAACCGTCTCTCTCCTCACCGAATTTTCTCTCTCTAAAATCCCATCGTCCTCTCTCTCTCTCTCTCTCTCTTCCGCATACGTTTCAAGTTCAAGCTTCTGGTTAATTGCGATCATGGCTTCCGCTGCAGATCCGATTGTACCTTCCGACGCGCCGGCCGCCGACGCGGCGGAGGTTCTGACTGTGGCGAACGATGCGAAGCCTAAGAAGGCCGCGTCCTCGAAAGCTTCCAAGGCTAAGAAACCATCGGGCGCGAAGAGGCCGAAATCTTCACCGACTCATCCTCCTTTCTTTCAGATGATTAGCGAGGCGATTGTATCGCTGAAGGAGAGGACAGGCTCGAGTCAGTACGCCATTACGAAGTTCAGTGAAGAGAAGCACAAACAGCTGCCGTCGAATTTCCGGAAGCTCTTGCTTGTTCATCTGAAGAAATTAGTCGCCGCTGATAAACTTGTTAAGGTGAAGAACTCCTACAAGCTTCCTTCCGCTCGCTCGATTCAGGCGAAAGCCGCAGCGCCTGTCGCTGCCAAGAAGCCAGCTAGTTCAAAGTTGAAGGCAGCTGCGAGTGTGAAGAAGAAGGCCGCCGTCGTCAAACCGAAGGCTAAAACTGCAGTGAAACCTAAGCCCAAGGCCGTGGTTAAGCCGAAGACGATCTCCAAATCCAAGGTTGTTGCAAAGCCGAAGGCGGCGGCGGCGGCGGCCAAGCCTAAGGCGGCGGCGAAAGTTAAAGCTGCTGCGAAGGCTAAGCCCGCTGCAAGGCCCGCGAAAGTGGCGAAAACATTGACGCAAACATCACCGGGAAAGAGAGCTGCACCGGCAGCGAAGGCGAAGAAGGTAGCCGCGAAGAAGCCGAAGACTGTAAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATGAACGTAGGTTTGATTGAATTTAGGGTTTGTTACTTACTGATCCTCTCTATCTCTCGTAGCCATGTAAATTAGGGGAAATGAGATGCAATCGTTGCAATACACTATTTTTATTAATTCAGTTTGATAAATTCAAGGGTTTATCAAATCAATCTTCAGAGAGTGATTTTCGATATGGCTTGAGATTCTGGAAAATTTGTAGGAATATAAAATGAAGCTTTGG

Coding sequence (CDS)

ATGGCTTCCGCTGCAGATCCGATTGTACCTTCCGACGCGCCGGCCGCCGACGCGGCGGAGGTTCTGACTGTGGCGAACGATGCGAAGCCTAAGAAGGCCGCGTCCTCGAAAGCTTCCAAGGCTAAGAAACCATCGGGCGCGAAGAGGCCGAAATCTTCACCGACTCATCCTCCTTTCTTTCAGATGATTAGCGAGGCGATTGTATCGCTGAAGGAGAGGACAGGCTCGAGTCAGTACGCCATTACGAAGTTCAGTGAAGAGAAGCACAAACAGCTGCCGTCGAATTTCCGGAAGCTCTTGCTTGTTCATCTGAAGAAATTAGTCGCCGCTGATAAACTTGTTAAGGTGAAGAACTCCTACAAGCTTCCTTCCGCTCGCTCGATTCAGGCGAAAGCCGCAGCGCCTGTCGCTGCCAAGAAGCCAGCTAGTTCAAAGTTGAAGGCAGCTGCGAGTGTGAAGAAGAAGGCCGCCGTCGTCAAACCGAAGGCTAAAACTGCAGTGAAACCTAAGCCCAAGGCCGTGGTTAAGCCGAAGACGATCTCCAAATCCAAGGTTGTTGCAAAGCCGAAGGCGGCGGCGGCGGCGGCCAAGCCTAAGGCGGCGGCGAAAGTTAAAGCTGCTGCGAAGGCTAAGCCCGCTGCAAGGCCCGCGAAAGTGGCGAAAACATTGACGCAAACATCACCGGGAAAGAGAGCTGCACCGGCAGCGAAGGCGAAGAAGGTAGCCGCGAAGAAGCCGAAGACTGTAAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATGA

Protein sequence

MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

Homology

[Close]

BLAST of MC08g2342 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.8e-39
Identity = 151/289 (52.25%), Postives = 186/289 (64.36%), Query Frame = 0


Query: 6   DPIVPSDAPAADAAEVLTVANDAKP--KKAASSKASKAKKPSGAKRPKSSPTHPPFFQMI 65
           +P++ ++     AA   TV ++A P  K   + K +KAKKP+  ++  ++PTHPP+F+MI
Sbjct: 5   EPVIVNEVVEEQAAPE-TVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYFEMI 64

Query: 66  SEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLP 125
            +AIV+LKERTGSSQ+AITKF EEK K LPSNF+KLLL  LKK VA++KLVKVKNSYKLP
Sbjct: 65  KDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKLP 124

Query: 126 SARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKP------ 185
           S  S  A AA P A KKPA++K K AA   K  A VKPKAK A K KP A  KP      
Sbjct: 125 SG-SKPAAAAVP-AKKKPAAAKSKPAA---KPKAAVKPKAKPAAKAKPAAKAKPAAKAKP 184

Query: 186 ----------KTISKSKVVAKPK-AAAAAAKPKAAAKVKAA-AKAKPAARP--------A 245
                     K  +K+K VAK K  AAAAAKPKAA K KAA AK K A +P        A
Sbjct: 185 AAKAKPAAKAKPAAKAKPVAKAKPKAAAAAKPKAAVKPKAAPAKTKAAVKPNLKAKTTTA 244

Query: 246 KVAKTLTQTSPGKRAAP-AAKAKKVAAKK--PKTVKSPARKVQARKVKK 264
           KVAKT T+T+P ++AAP A  AKK   KK   K VKSPA+K   ++ +K
Sbjct: 245 KVAKTATRTTPSRKAAPKATPAKKEPVKKAPAKNVKSPAKKATPKRGRK 287

[Close]

BLAST of MC08g2342 vs. ExPASy Swiss-Prot
Match: Q9M5W4 (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.2e-35
Identity = 134/249 (53.82%), Postives = 151/249 (60.64%), Query Frame = 0


Query: 11  SDAP-AADAAEVLTVANDAKPKKAASSKASKAKKP-SGAKRPKSSPT--HPPFFQMISEA 70
           +D P +A     +T     +  KAA+ K  K KK    AK+PKS  T  HP FF+MIS+A
Sbjct: 2   ADTPVSAPVVPEVTERKSKRGTKAAAVKVPKEKKKVIAAKKPKSKGTSSHPSFFEMISDA 61

Query: 71  IVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSAR 130
           I +LKERTGSSQYAI KF E+KHKQLPSNFRKLLL HLKKLVA+ KLVKVKNS+KLPSAR
Sbjct: 62  ISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSAR 121

Query: 131 SIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVV 190
           +    A AP  AKKP   K K AA  K      KPKAK  V  K KA    KT++K    
Sbjct: 122 A----APAPALAKKPTIPKPKVAAKPKTAKIGAKPKAKAKVAAKTKATT--KTVAKKIPA 181

Query: 191 AKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKP 250
           AKPK A  A KPK             AA+PAKVAKT    SPGK+       K V  KK 
Sbjct: 182 AKPK-AKTAGKPKTV-----------AAKPAKVAKTAAVASPGKK-------KAVPVKKV 225

Query: 251 KTVKSPARK 256
           KTVKSPA K
Sbjct: 242 KTVKSPAGK 225

[Close]

BLAST of MC08g2342 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.4e-32
Identity = 137/268 (51.12%), Postives = 168/268 (62.69%), Query Frame = 0


Query: 12  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEA 71
           D+ AAD    + E    A   K KK  ++KA+K   K +   + K++ +HP + +MI +A
Sbjct: 13  DSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDA 72

Query: 72  IVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSAR 131
           IV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+K+PSAR
Sbjct: 73  IVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSAR 132

Query: 132 SIQA-KAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKV 191
           S    K AAPV  K    +K K     K  AAV   KAK A K   K     K ++K+KV
Sbjct: 133 SAATPKPAAPVKKKATVVAKPKG----KVAAAVAPAKAKAAAKGTKKPAA--KVVAKAKV 192

Query: 192 VAKPKAAAAAAKPK-----AAAKVKA-AAKAKPAARPAKVAKTLTQTSPGKR-AAPAAK- 251
            AKPKA   AAKPK     A +K KA AAK K   RPAK ++T T+TSPGK+ AAPA K 
Sbjct: 193 TAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKV 252

Query: 252 --AKKVAAKKPKTVKSPARKVQARKVKK 264
              KK  AK  K VKSPA++   RK KK
Sbjct: 253 AVTKKAPAKSVK-VKSPAKRASTRKAKK 273

[Close]

BLAST of MC08g2342 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.4e-32
Identity = 129/278 (46.40%), Postives = 162/278 (58.27%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKK------AASSKASKAKKPSGAKRPKSSP 60
           MA+    +     P     E  T+     P+K         +K +K  KP  A +P++  
Sbjct: 1   MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKKASKPRNPA 60

Query: 61  THPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLV 120
           +HP + +MI +AIVSLKE+ GSSQYAI KF EEK KQLP+NF+KLLL +LKK VA+ KL+
Sbjct: 61  SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLI 120

Query: 121 KVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAV 180
           KVK S+KL +            AAKKPA +K KA  + K K+     KAK A KPK KAV
Sbjct: 121 KVKGSFKLSA------------AAKKPAVAKPKAKTAAKAKSV----KAKPAAKPKAKAV 180

Query: 181 VKPKTISKSKVV--------AKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQT 240
           VKPK  SK+K V        AKPK  AA  KP  AAK KA  K K   +PAKVAKT  +T
Sbjct: 181 VKPKVASKAKAVAAKPKKAAAKPKTVAAKTKP-TAAKPKAVVKPKSKVKPAKVAKTSVKT 240

Query: 241 SPGKRAAPAAK--AKKVAAK--KPKTVKSPARKVQARK 261
           +PGK+ A   K  AKKV  K  K K+VKSP +KV  ++
Sbjct: 241 TPGKKVAAVKKVAAKKVPVKSVKAKSVKSPVKKVSVKR 261

[Close]

BLAST of MC08g2342 vs. ExPASy Swiss-Prot
Match: P23444 (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 4.1e-30
Identity = 138/264 (52.27%), Postives = 157/264 (59.47%), Query Frame = 0


Query: 5   ADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMIS 64
           A P  P+DAPAA AA+    AN AK KKA             A + ++SPTH P+ +M+S
Sbjct: 15  AAPEAPADAPAAPAAD----ANAAKAKKAT------------APKKRASPTHLPYAEMVS 74

Query: 65  EAIVSLKERTGSSQYAITKFSEEKHK-QLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLP 124
           EAI SLKERTGSS YAI KF E+KHK +LP NFRKLL V LKKLVA  KL KVKNSYKL 
Sbjct: 75  EAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLS 134

Query: 125 SARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKS 184
           SA     K  A  A KKP +   K  A+ K KA     KAK A KPKP A  KPK + K 
Sbjct: 135 SATKPNPKPKA--APKKPKTGAKKPKAAAKPKAK-TPAKAKPATKPKPAA--KPKAVVKP 194

Query: 185 KVVAKPKA-AAAAAKPKAAAKVKAAAKAKPAARP---AKVAKTLTQTSPGKRAAPAAKAK 244
           K  AKPKA  AA AKPK      A AK KP A+    AK AKT  + +PGK+ APA KA 
Sbjct: 195 KTPAKPKAKPAAKAKPKT-----AGAKPKPLAKKAGRAKAAKTSAKDTPGKK-APAKKA- 246

Query: 245 KVAAKKPKTVKSPARKVQARKVKK 264
              +KK  T   P RK  +RK KK
Sbjct: 255 -APSKKAAT---PVRKAPSRKAKK 246

[Close]

BLAST of MC08g2342 vs. NCBI nr
Match: XP_022142941.1 (histone H1-like [Momordica charantia])

HSP 1 Score: 425 bits (1093), Expect = 1.94e-148
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60
           MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF
Sbjct: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180
           KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI
Sbjct: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180

Query: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKK 240
           SKSKVVAKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKK
Sbjct: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKK 240

Query: 241 VAAKKPKTVKSPARKVQARKVKK 263
           VAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 VAAKKPKTVKSPARKVQARKVKK 263

[Close]

BLAST of MC08g2342 vs. NCBI nr
Match: KAG6599320.1 (Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333 bits (853), Expect = 5.86e-112
Identity = 222/264 (84.09%), Postives = 233/264 (88.26%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60
           M+SAADP+  SDAPA  AA    V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180
           KLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPKAV KPK  
Sbjct: 121 KLPSARSKAA--AAPVVAKKPASSKLKAAVSVKK-AAVAKPKAKTAVKPKPKAVAKPKAA 180

Query: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAK 240
           +KSKVVAKPKA A A K KAA KVK  A K KPAA+PAKVAKTL++TSPGK+AAPAAKAK
Sbjct: 181 AKSKVVAKPKAVAPA-KRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAAPAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 263
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of MC08g2342 vs. NCBI nr
Match: XP_022946127.1 (histone H1-like [Cucurbita moschata] >KAG7030316.1 Histone H1.2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332 bits (850), Expect = 1.68e-111
Identity = 221/264 (83.71%), Postives = 234/264 (88.64%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60
           M+SAADP+  SDAPA  AA    V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKFSEEKHK+LPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKKLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180
           KLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPKAV KPK+ 
Sbjct: 121 KLPSARSKAA--AAPVVAKKPASSKLKAAVSVKK-AAVAKPKAKTAVKPKPKAVAKPKSA 180

Query: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAK 240
           +KSKVVAKPKA A A K KAA KVK  A K KPAA+PAKVAKTL++TSPGK+AAPAAKAK
Sbjct: 181 AKSKVVAKPKAVAPA-KRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAAPAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 263
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of MC08g2342 vs. NCBI nr
Match: XP_023521173.1 (histone H1-like [Cucurbita pepo subsp. pepo] >XP_023521452.1 histone H1-like [Cucurbita pepo subsp. pepo] >XP_023547297.1 histone H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328 bits (841), Expect = 3.91e-110
Identity = 219/264 (82.95%), Postives = 230/264 (87.12%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60
           M+SAADP+  SDAPA  A       ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAQPAENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180
           KLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARSKAA--AAPVVAKKPASSKLKAAVSVKK-AAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAK 240
           +KSKVVAKPKA A A K KAA KVK  A K KPAA+PAKVAKTL++TSPGK+AAPAAKAK
Sbjct: 181 AKSKVVAKPKAVAPA-KRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAAPAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 263
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of MC08g2342 vs. NCBI nr
Match: XP_022999095.1 (histone H1-like [Cucurbita maxima])

HSP 1 Score: 326 bits (835), Expect = 3.19e-109
Identity = 218/264 (82.58%), Postives = 229/264 (86.74%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60
           M+SAADP+  SDAPA  A     V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAPPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180
           KLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARSKAA--AAPVVAKKPASSKLKAAVSVKK-AAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAK 240
           +KSKVV KPKA A A K KAA KVK  A K KPAA+PAKVAKTL++ SPGK+AAPAAKAK
Sbjct: 181 AKSKVVGKPKAVAPA-KRKAAEKVKKVAPKPKPAAKPAKVAKTLSRASPGKKAAPAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 263
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of MC08g2342 vs. ExPASy TrEMBL
Match: A0A6J1CNP7 (histone H1-like OS=Momordica charantia OX=3673 GN=LOC111012938 PE=3 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 9.41e-149
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60
           MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF
Sbjct: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180
           KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI
Sbjct: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180

Query: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKK 240
           SKSKVVAKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKK
Sbjct: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKK 240

Query: 241 VAAKKPKTVKSPARKVQARKVKK 263
           VAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 VAAKKPKTVKSPARKVQARKVKK 263

[Close]

BLAST of MC08g2342 vs. ExPASy TrEMBL
Match: A0A6J1G2W2 (histone H1-like OS=Cucurbita moschata OX=3662 GN=LOC111450301 PE=3 SV=1)

HSP 1 Score: 332 bits (850), Expect = 8.11e-112
Identity = 221/264 (83.71%), Postives = 234/264 (88.64%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60
           M+SAADP+  SDAPA  AA    V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKFSEEKHK+LPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKKLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180
           KLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPKAV KPK+ 
Sbjct: 121 KLPSARSKAA--AAPVVAKKPASSKLKAAVSVKK-AAVAKPKAKTAVKPKPKAVAKPKSA 180

Query: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAK 240
           +KSKVVAKPKA A A K KAA KVK  A K KPAA+PAKVAKTL++TSPGK+AAPAAKAK
Sbjct: 181 AKSKVVAKPKAVAPA-KRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAAPAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 263
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of MC08g2342 vs. ExPASy TrEMBL
Match: A0A6J1KEC3 (histone H1-like OS=Cucurbita maxima OX=3661 GN=LOC111493576 PE=3 SV=1)

HSP 1 Score: 326 bits (835), Expect = 1.55e-109
Identity = 218/264 (82.58%), Postives = 229/264 (86.74%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60
           M+SAADP+  SDAPA  A     V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAPPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTI 180
           KLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARSKAA--AAPVVAKKPASSKLKAAVSVKK-AAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 SKSKVVAKPKAAAAAAKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAK 240
           +KSKVV KPKA A A K KAA KVK  A K KPAA+PAKVAKTL++ SPGK+AAPAAKAK
Sbjct: 181 AKSKVVGKPKAVAPA-KRKAAEKVKKVAPKPKPAAKPAKVAKTLSRASPGKKAAPAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 263
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of MC08g2342 vs. ExPASy TrEMBL
Match: A0A5D3D4H1 (Histone H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001600 PE=3 SV=1)

HSP 1 Score: 321 bits (822), Expect = 1.74e-107
Identity = 218/269 (81.04%), Postives = 231/269 (85.87%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAA-DAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPF 60
           M+SAADP+V SDAPAA DAA      ND+K KKAA+SKASKAKKPSGAK+ +SSPTHPPF
Sbjct: 1   MSSAADPVVSSDAPAAADAAVAQPAENDSKSKKAAASKASKAKKPSGAKKARSSPTHPPF 60

Query: 61  FQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120
            QMISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS
Sbjct: 61  LQMISEAIVSLKERTGSSQYAITKFTEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120

Query: 121 YKLPSARSIQAKAAA--PVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKP 180
           YKLPSARSIQAKAAA  PVA KKP SSKLKA AS+KK A V KPKAKTA KPKPKAV KP
Sbjct: 121 YKLPSARSIQAKAAAAAPVATKKPVSSKLKAVASIKKPA-VAKPKAKTAAKPKPKAVAKP 180

Query: 181 K--TISKSKVVAKPKAAAAAAKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAP 240
           K  T++KSK VAKPK AA   K KAA KVK  A K K  A+  KVAKTL++TSPGKRAAP
Sbjct: 181 KPKTVTKSKTVAKPKTAA---KTKAAEKVKKVAPKPKAGAKATKVAKTLSRTSPGKRAAP 240

Query: 241 AAKAKKVAAKKPKTVKSPARKVQARKVKK 263
           AAKAKKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 AAKAKKVAAKKPKTVKSPARKVQARKVKK 265

[Close]

BLAST of MC08g2342 vs. ExPASy TrEMBL
Match: A0A1S3C278 (histone H1-like OS=Cucumis melo OX=3656 GN=LOC103496189 PE=3 SV=1)

HSP 1 Score: 318 bits (814), Expect = 2.85e-106
Identity = 217/269 (80.67%), Postives = 230/269 (85.50%), Query Frame = 0


Query: 1   MASAADPIVPSDAPAA-DAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPF 60
           M+SAADP+V SDAPAA DAA      ND+K KKAA+SKASKAKKPSGAK+ +SSPTHPPF
Sbjct: 1   MSSAADPVVSSDAPAAADAAVAQPAENDSKSKKAAASKASKAKKPSGAKKARSSPTHPPF 60

Query: 61  FQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120
            QMISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS
Sbjct: 61  LQMISEAIVSLKERTGSSQYAITKFTEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120

Query: 121 YKLPSARSIQAKAAA--PVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKP 180
           YKLPSARSIQAKAAA  PVA KKP SSKLKA AS+KK A V KPKAKTA K KPKAV KP
Sbjct: 121 YKLPSARSIQAKAAAAAPVATKKPVSSKLKAVASIKKPA-VAKPKAKTAAKSKPKAVAKP 180

Query: 181 K--TISKSKVVAKPKAAAAAAKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAP 240
           K  T++KSK VAKPK AA   K KAA KVK  A K K  A+  KVAKTL++TSPGKRAAP
Sbjct: 181 KPKTVTKSKTVAKPKTAA---KTKAAEKVKKVAPKPKAGAKATKVAKTLSRTSPGKRAAP 240

Query: 241 AAKAKKVAAKKPKTVKSPARKVQARKVKK 263
           AAKAKKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 AAKAKKVAAKKPKTVKSPARKVQARKVKK 265

[Close]

BLAST of MC08g2342 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.4e-33
Identity = 137/268 (51.12%), Postives = 168/268 (62.69%), Query Frame = 0


Query: 12  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEA 71
           D+ AAD    + E    A   K KK  ++KA+K   K +   + K++ +HP + +MI +A
Sbjct: 13  DSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDA 72

Query: 72  IVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSAR 131
           IV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+K+PSAR
Sbjct: 73  IVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSAR 132

Query: 132 SIQA-KAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKV 191
           S    K AAPV  K    +K K     K  AAV   KAK A K   K     K ++K+KV
Sbjct: 133 SAATPKPAAPVKKKATVVAKPKG----KVAAAVAPAKAKAAAKGTKKPAA--KVVAKAKV 192

Query: 192 VAKPKAAAAAAKPK-----AAAKVKA-AAKAKPAARPAKVAKTLTQTSPGKR-AAPAAK- 251
            AKPKA   AAKPK     A +K KA AAK K   RPAK ++T T+TSPGK+ AAPA K 
Sbjct: 193 TAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKV 252

Query: 252 --AKKVAAKKPKTVKSPARKVQARKVKK 264
              KK  AK  K VKSPA++   RK KK
Sbjct: 253 AVTKKAPAKSVK-VKSPAKRASTRKAKK 273

[Close]

BLAST of MC08g2342 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 125.6 bits (314), Expect = 6.1e-29
Identity = 133/266 (50.00%), Postives = 160/266 (60.15%), Query Frame = 0


Query: 11  SDAPAADAAEVLTVANDAKPKKAASSKASKAKKP-SGAKRPKSSPTHPPFFQMISEAIVS 70
           +DAP  DAA     A  AK +K  + K  K KK  + A + ++  +HP + +MI +AIV+
Sbjct: 18  ADAPVTDAAVEKKPA--AKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVT 77

Query: 71  LKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQ 130
           LKERTGSSQYAI KF EEK K+LP  FRKLLL++LK+LVA+ KLVKVK S+KLPSA    
Sbjct: 78  LKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSA---S 137

Query: 131 AKAAAP-VAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAK 190
           AKA++P  AA+K A +K K A     KA   K K   A K K    VKPKT +  KV AK
Sbjct: 138 AKASSPKAAAEKSAPAKKKPATVAVTKA---KRKVAAASKAKKTIAVKPKTAAAKKVTAK 197

Query: 191 PKAAAAAAKPKAAAKVKAA-AKAKPAARPAKVAKTLTQTSPGKRAAPAAK-------AKK 250
            KA        AA K KA  AK K  ARPAK AKT   TSP K+A  A K        KK
Sbjct: 198 AKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATKKK 257

Query: 251 VAAK---KPKTVKSPARKVQARKVKK 264
              K   KPKTVKSPA++  +R VKK
Sbjct: 258 TPVKKVVKPKTVKSPAKRASSR-VKK 274

[Close]

BLAST of MC08g2342 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 102.1 bits (253), Expect = 7.2e-22
Identity = 101/208 (48.56%), Postives = 127/208 (61.06%), Query Frame = 0


Query: 12  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEA 71
           D+ AAD    + E    A   K KK  ++KA+K   K +   + K++ +HP + +MI +A
Sbjct: 13  DSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDA 72

Query: 72  IVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSAR 131
           IV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+K+PSAR
Sbjct: 73  IVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSAR 132

Query: 132 SIQAKAAAPVAAKKPASSKLKAAASVKKKAAVV-KPKA-KTAVKPKP-KAVVKPKTISKS 191
           S    AA P           K AA VKKKA VV KPKA +T+ +  P K V  P      
Sbjct: 133 S----AATP-----------KPAAPVKKKATVVAKPKASRTSTRTSPGKKVAAP----AK 192

Query: 192 KVVAKPKAAAAAAKPKAAAKVKAAAKAK 212
           KV    KA A + K K+ AK  +  KAK
Sbjct: 193 KVAVTKKAPAKSVKVKSPAKRASTRKAK 201

[Close]

BLAST of MC08g2342 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-11
Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 37  KASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPSN 96
           K   AKKP   ++PK++ THPP+FQMI EA++ LKE+ GSS YAI K  EEKHK  LP +
Sbjct: 9   KTPAAKKP---RKPKTT-THPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPES 68

Query: 97  FRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAK------KPASSKLKAA 156
           FRK L + LK  VA  KLVK++ SYKL     +  +       K      K  + + +++
Sbjct: 69  FRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRSS 128

Query: 157 ASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAA 197
           ++  KK   V  + K   K K K   +PK+I  S  V K KA  A+A
Sbjct: 129 STRPKKTVSVNKQEK---KRKVKKARQPKSIKSS--VGKKKAMKASA 166

[Close]

BLAST of MC08g2342 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 49.7 bits (117), Expect = 4.2e-06
Identity = 56/142 (39.44%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 62  MISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPSNFRKLLLVHLKKLVAADKLVKVKNSY 121
           MI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L + LK  VA  KLVK++ SY
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KLPSARSIQAKAAAPVAAK------KPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAV 181
           KL     +  +       K      K  + + +++++  KK   V  + K   K K K  
Sbjct: 61  KLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVSVNKQEK---KRKVKKA 120

Query: 182 VKPKTISKSKVVAKPKAAAAAA 197
            +PK+I  S  V K KA  A+A
Sbjct: 121 RQPKSIKSS--VGKKKAMKASA 137

The following BLAST results are available for this feature:

BLAST of MC08g2342 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37218	2.8e-39	52.25	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
Q9M5W4	7.2e-35	53.82	Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
P26569	3.4e-32	51.12	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P08283	4.4e-32	46.40	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P23444	4.1e-30	52.27	Histone H1 OS=Zea mays OX=4577 PE=2 SV=2	[more]

BLAST of MC08g2342 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142941.1	1.94e-148	100.00	histone H1-like [Momordica charantia]	[more]
KAG6599320.1	5.86e-112	84.09	Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946127.1	1.68e-111	83.71	histone H1-like [Cucurbita moschata] >KAG7030316.1 Histone H1.2 [Cucurbita argyr...	[more]
XP_023521173.1	3.91e-110	82.95	histone H1-like [Cucurbita pepo subsp. pepo] >XP_023521452.1 histone H1-like [Cu...	[more]
XP_022999095.1	3.19e-109	82.58	histone H1-like [Cucurbita maxima]	[more]

BLAST of MC08g2342 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNP7	9.41e-149	100.00	histone H1-like OS=Momordica charantia OX=3673 GN=LOC111012938 PE=3 SV=1	[more]
A0A6J1G2W2	8.11e-112	83.71	histone H1-like OS=Cucurbita moschata OX=3662 GN=LOC111450301 PE=3 SV=1	[more]
A0A6J1KEC3	1.55e-109	82.58	histone H1-like OS=Cucurbita maxima OX=3661 GN=LOC111493576 PE=3 SV=1	[more]
A0A5D3D4H1	1.74e-107	81.04	Histone H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G0016...	[more]
A0A1S3C278	2.85e-106	80.67	histone H1-like OS=Cucumis melo OX=3656 GN=LOC103496189 PE=3 SV=1	[more]

BLAST of MC08g2342 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	2.4e-33	51.12	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	6.1e-29	50.00	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	7.2e-22	48.56	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	2.6e-11	41.32	histone H1-3	[more]
AT2G18050.2	4.2e-06	39.44	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 42..63 score: 41.41 coord: 194..213 score: 30.0 coord: 69..86 score: 38.89 coord: 140..154 score: 36.3 coord: 172..189 score: 32.72
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 2.5E-30 score: 116.7
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 2.5E-15 score: 56.6
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 27.810253
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..127 e-value: 1.22552E-14 score: 65.7203
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 51..135 e-value: 1.9E-17 score: 65.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..263
None	No IPR available	PANTHER	PTHR11467:SF128	SUBFAMILY NOT NAMED	coord: 12..263
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 12..263
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2342.1	MC08g2342.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030261	chromosome condensation
biological_process	GO:0045910	negative regulation of DNA recombination
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0016584	nucleosome positioning
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0031492	nucleosomal DNA binding
molecular_function	GO:0003677	DNA binding