MC08g2069 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2069
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 29373459 .. 29373629 (+)
RNA-Seq Expression	MC08g2069
Synteny	MC08g2069

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTGGGTGTGAAGATAGTAAGAAAAGGGTATTGGACAGAGGATGAATGGGGCAAAATGAGGAGTGTGTCTGTGTCTCAGCACAGGGCCGAACAGCAAGGATTGTTTTCAGTGATCTCAGCCACTCCTCCTCCGCAGGTTGTCTTTGAAGCATTTCTCACCATGGAGAAT

mRNA sequence

CAGGTGGGTGTGAAGATAGTAAGAAAAGGGTATTGGACAGAGGATGAATGGGGCAAAATGAGGAGTGTGTCTGTGTCTCAGCACAGGGCCGAACAGCAAGGATTGTTTTCAGTGATCTCAGCCACTCCTCCTCCGCAGGTTGTCTTTGAAGCATTTCTCACCATGGAGAAT

Coding sequence (CDS)

CAGGTGGGTGTGAAGATAGTAAGAAAAGGGTATTGGACAGAGGATGAATGGGGCAAAATGAGGAGTGTGTCTGTGTCTCAGCACAGGGCCGAACAGCAAGGATTGTTTTCAGTGATCTCAGCCACTCCTCCTCCGCAGGTTGTCTTTGAAGCATTTCTCACCATGGAGAAT

Protein sequence

QVGVKIVRKGYWTEDEWGKMRSVSVSQHRAEQQGLFSVISATPPPQVVFEAFLTMEN

Homology

[Close]

BLAST of MC08g2069 vs. NCBI nr
Match: XP_038889583.1 (23 kDa jasmonate-induced protein-like [Benincasa hispida])

HSP 1 Score: 51.6 bits (122), Expect = 8.01e-06
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 1   QVGVKIVRKGYWTEDEWGKMRSVSV---SQHRAEQQGLFSVISATPPPQVVFEAFLTMEN 57
           QV VKI R   W E+EW  +        S HR +++G  SVISA+P P VVFEA LTM++
Sbjct: 156 QVHVKIGRDVDWCENEWNNVYKALERCGSLHRTKEEGWRSVISASPGPHVVFEALLTMKH 215

[Close]

BLAST of MC08g2069 vs. NCBI nr
Match: XP_008451161.1 (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo])

HSP 1 Score: 48.9 bits (115), Expect = 8.17e-05
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 1   QVGVKIVRKGYWTEDEWGKMRSV---SVSQHRAEQQGLFSVISATPPPQVVFEAFLTMEN 57
           QV VKI R   W ++EW  +      S S HR +++G  SVISA+  P VVFEA LTM++
Sbjct: 159 QVHVKIGRDIDWCKNEWNNVYRTLENSGSLHRIKEKGWLSVISASARPNVVFEALLTMDH 218

[Close]

BLAST of MC08g2069 vs. NCBI nr
Match: TYK03078.1 (23 kDa jasmonate-induced protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 48.5 bits (114), Expect = 1.14e-04
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 1   QVGVKIVRKGYWTEDEWGKMRSV---SVSQHRAEQQGLFSVISATPPPQVVFEAFLTMEN 57
           QV VKI R   W ++EW  +      S S HR +++G  SVISA+  P VVFEA LTM++
Sbjct: 160 QVHVKIGRDIDWYKNEWNNVYRTLENSGSLHRIKEKGWLSVISASARPNVVFEALLTMDH 219

[Close]

BLAST of MC08g2069 vs. ExPASy TrEMBL
Match: A0A1S3BQ98 (23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103492535 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.96e-05
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 1   QVGVKIVRKGYWTEDEWGKMRSV---SVSQHRAEQQGLFSVISATPPPQVVFEAFLTMEN 57
           QV VKI R   W ++EW  +      S S HR +++G  SVISA+  P VVFEA LTM++
Sbjct: 159 QVHVKIGRDIDWCKNEWNNVYRTLENSGSLHRIKEKGWLSVISASARPNVVFEALLTMDH 218

[Close]

BLAST of MC08g2069 vs. ExPASy TrEMBL
Match: A0A5D3BVQ0 (23 kDa jasmonate-induced protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001850 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.51e-05
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 1   QVGVKIVRKGYWTEDEWGKMRSV---SVSQHRAEQQGLFSVISATPPPQVVFEAFLTMEN 57
           QV VKI R   W ++EW  +      S S HR +++G  SVISA+  P VVFEA LTM++
Sbjct: 160 QVHVKIGRDIDWYKNEWNNVYRTLENSGSLHRIKEKGWLSVISASARPNVVFEALLTMDH 219

The following BLAST results are available for this feature:

BLAST of MC08g2069 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g2069 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889583.1	8.01e-06	48.33	23 kDa jasmonate-induced protein-like [Benincasa hispida]	[more]
XP_008451161.1	8.17e-05	46.67	PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo]	[more]
TYK03078.1	1.14e-04	46.67	23 kDa jasmonate-induced protein-like [Cucumis melo var. makuwa]	[more]

BLAST of MC08g2069 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQ98	3.96e-05	46.67	23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103492535 PE...	[more]
A0A5D3BVQ0	5.51e-05	46.67	23 kDa jasmonate-induced protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of MC08g2069 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2069.1	MC08g2069.1	mRNA