MC08g1992 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g1992
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 28287700 .. 28287930 (-)
RNA-Seq ExpressionMC08g1992
SyntenyMC08g1992
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGGCCAATTCTAGCTGATTACCATGGAGGCTTTGGAGATGTCACCTTGGTTAGTTCTAGCGGATTATTTTTGCTTTCGATTGTCCTTCTATCGATCTCTCTCATATCGATGATCATATTTGCTTGCGGTGACTCTAGTAACGATCTTCAAAAGAAAAGAGATGGTGGCGGTGGTGGCTGCGGCGGAGGTTGCGGTGGTGGAGGCTGTGGTGGCTGTGGTGGTGGT

mRNA sequence

ATGGCTAGGCCAATTCTAGCTGATTACCATGGAGGCTTTGGAGATGTCACCTTGGTTAGTTCTAGCGGATTATTTTTGCTTTCGATTGTCCTTCTATCGATCTCTCTCATATCGATGATCATATTTGCTTGCGGTGACTCTAGTAACGATCTTCAAAAGAAAAGAGATGGTGGCGGTGGTGGCTGCGGCGGAGGTTGCGGTGGTGGAGGCTGTGGTGGCTGTGGTGGTGGT

Coding sequence (CDS)

ATGGCTAGGCCAATTCTAGCTGATTACCATGGAGGCTTTGGAGATGTCACCTTGGTTAGTTCTAGCGGATTATTTTTGCTTTCGATTGTCCTTCTATCGATCTCTCTCATATCGATGATCATATTTGCTTGCGGTGACTCTAGTAACGATCTTCAAAAGAAAAGAGATGGTGGCGGTGGTGGCTGCGGCGGAGGTTGCGGTGGTGGAGGCTGTGGTGGCTGTGGTGGTGGT

Protein sequence

MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGCGGGCGGGGCGGCGGG
Homology
BLAST of MC08g1992 vs. NCBI nr
Match: KAG6603229.1 (hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.3 bits (199), Expect = 3.56e-18
Identity = 49/73 (67.12%), Postives = 57/73 (78.08%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGG 60
          M RPI A   GG GDVTL SS GL LL+ +L+S+SL+SMIIFACGDSS   ++KR+GGGG
Sbjct: 1  MGRPIPAADGGGLGDVTLFSSGGLLLLATILMSLSLVSMIIFACGDSSRKNKRKRNGGGG 60

Query: 61 GCGGGCGGGGCGG 73
          G G  CGGGGCGG
Sbjct: 61 GAG--CGGGGCGG 71

BLAST of MC08g1992 vs. NCBI nr
Match: KAG6604774.1 (hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 77.0 bits (188), Expect = 1.97e-16
Identity = 58/83 (69.88%), Postives = 63/83 (75.90%), Query Frame = 0

Query: 1  MARPILADYHGG--FGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGG 60
          M RPILA   GG  F DVTLVSS GLFLLS +LLSISL+SMIIFACG+S ND ++K  GG
Sbjct: 1  MGRPILAAAGGGGGFQDVTLVSSGGLFLLSAILLSISLVSMIIFACGNS-NDPKRKDGGG 60

Query: 61 G-----GGCGGGCGGGGCGGCGG 76
          G     GG GGGCGGG CGGCGG
Sbjct: 61 GCGGGDGGGGGGCGGG-CGGCGG 81

BLAST of MC08g1992 vs. NCBI nr
Match: KAG6603228.1 (hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 77.4 bits (189), Expect = 2.55e-16
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGG 60
          M R I A   GG GDVTL SS GL LL+ VLLS+SL+SMIIFACGDSS+D ++KR+GGG 
Sbjct: 1  MGRSIPAADGGGLGDVTLFSSGGLLLLATVLLSLSLVSMIIFACGDSSSDNKRKRNGGG- 60

Query: 61 GCGGGCGGGGCGGCGG 76
               CGGGG GGCGG
Sbjct: 61 -----CGGGGGGGCGG 70

BLAST of MC08g1992 vs. NCBI nr
Match: KAG4968855.1 (hypothetical protein JHK87_034506 [Glycine soja] >KAG4981320.1 hypothetical protein JHK85_035278 [Glycine max] >KAG4986941.1 hypothetical protein JHK86_034632 [Glycine max] >KAG5120140.1 hypothetical protein JHK82_034560 [Glycine max] >KAG5141125.1 hypothetical protein JHK84_034893 [Glycine max])

HSP 1 Score: 60.5 bits (145), Expect = 7.10e-10
Identity = 31/58 (53.45%), Postives = 45/58 (77.59%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLVSSSG-LFLLSIVLLSISLISMIIFACG-DSSNDLQKKRD 56
          M R  LA +HGG+GD  ++  SG LFLL ++ LS+S+ISMIIFACG D+S++ ++KR+
Sbjct: 1  MGREFLAMFHGGYGDEVIMHKSGVLFLLGMIFLSLSVISMIIFACGADNSHEYRRKRN 58

BLAST of MC08g1992 vs. NCBI nr
Match: KGN61189.1 (hypothetical protein Csa_006542 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 2.42e-09
Identity = 45/78 (57.69%), Postives = 52/78 (66.67%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKR--DGG 60
          M RPI A      GDVT     GL LLS++LLSISL+SMIIFAC +  N  +++   DGG
Sbjct: 1  MGRPIAAT----IGDVTTSIPGGLSLLSLILLSISLLSMIIFACSNFFNTRRRRGGDDGG 60

Query: 61 GGGC---GGGCGGGGCGG 73
           GGC   GGGCGGGGCGG
Sbjct: 61 AGGCACGGGGCGGGGCGG 74

BLAST of MC08g1992 vs. ExPASy TrEMBL
Match: I1LUN3 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G211400 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.44e-10
Identity = 31/58 (53.45%), Postives = 45/58 (77.59%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLVSSSG-LFLLSIVLLSISLISMIIFACG-DSSNDLQKKRD 56
          M R  LA +HGG+GD  ++  SG LFLL ++ LS+S+ISMIIFACG D+S++ ++KR+
Sbjct: 1  MGREFLAMFHGGYGDEVIMHKSGVLFLLGMIFLSLSVISMIIFACGADNSHEYRRKRN 58

BLAST of MC08g1992 vs. ExPASy TrEMBL
Match: A0A445HTB8 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_035059 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.44e-10
Identity = 31/58 (53.45%), Postives = 45/58 (77.59%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLVSSSG-LFLLSIVLLSISLISMIIFACG-DSSNDLQKKRD 56
          M R  LA +HGG+GD  ++  SG LFLL ++ LS+S+ISMIIFACG D+S++ ++KR+
Sbjct: 1  MGREFLAMFHGGYGDEVIMHKSGVLFLLGMIFLSLSVISMIIFACGADNSHEYRRKRN 58

BLAST of MC08g1992 vs. ExPASy TrEMBL
Match: A0A0A0LJD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062640 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.17e-09
Identity = 45/78 (57.69%), Postives = 52/78 (66.67%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKR--DGG 60
          M RPI A      GDVT     GL LLS++LLSISL+SMIIFAC +  N  +++   DGG
Sbjct: 1  MGRPIAAT----IGDVTTSIPGGLSLLSLILLSISLLSMIIFACSNFFNTRRRRGGDDGG 60

Query: 61 GGGC---GGGCGGGGCGG 73
           GGC   GGGCGGGGCGG
Sbjct: 61 AGGCACGGGGCGGGGCGG 74

BLAST of MC08g1992 vs. ExPASy TrEMBL
Match: A0A540MXA9 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_010997 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.18e-08
Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLV----SSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRD 60
          MAR  +    G  G+V ++    +S GL LL ++L+S+SLISM+IFACGDSS   + +  
Sbjct: 1  MARTYVGLGGGHAGEVAIMMPDHNSGGLLLLCMILMSLSLISMVIFACGDSSGSPRPRPG 60

Query: 61 GGG-----GGCGGGCGGGGCGG 73
          GGG     GGCGGG GGGGCGG
Sbjct: 61 GGGWGGGGGGCGGGGGGGGCGG 82

BLAST of MC08g1992 vs. ExPASy TrEMBL
Match: A0A061DKB8 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001723 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.59e-08
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 0

Query: 1  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDG-GG 60
          MAR ++     G G    VS  GLFLL +++ S+S+ISM+IFACGD+++   +   G GG
Sbjct: 1  MARELVNLGGSGAGGEAGVSG-GLFLLCMIVFSLSIISMVIFACGDNNSGKPRHNHGAGG 60

Query: 61 GGCGGGCGGGGCGGCGG 76
          GGCG  CGGGGCGGCGG
Sbjct: 61 GGCG--CGGGGCGGCGG 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6603229.13.56e-1867.12hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6604774.11.97e-1669.88hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6603228.12.55e-1665.79hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG4968855.17.10e-1053.45hypothetical protein JHK87_034506 [Glycine soja] >KAG4981320.1 hypothetical prot... [more]
KGN61189.12.42e-0957.69hypothetical protein Csa_006542 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
I1LUN33.44e-1053.45Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G211400 PE=4 SV=1[more]
A0A445HTB83.44e-1053.45Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_035059 PE=4 SV=1[more]
A0A0A0LJD51.17e-0957.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062640 PE=4 SV=1[more]
A0A540MXA91.18e-0851.22Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_010997 PE=4 SV=1[more]
A0A061DKB82.59e-0853.25Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001723 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35420OS02G0198500 PROTEINcoord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g1992.1MC08g1992.1mRNA