MC08g1987 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1987
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	two-component response regulator ARR22-like
Location	MC08: 28121621 .. 28123464 (+)
RNA-Seq Expression	MC08g1987
Synteny	MC08g1987

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAATAATAAGTGCTTTGGTTGTGGATGATGAGGCTGTGGTTAGATACATTCACATGTCTCTCCTCAGAAAGTTGAATGTTGAACAAGTTGAAGCAGCTGAAAGTGGAAAGGCAGCAGTTGATGCTTTCCAATGTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTCTCATGGATGGGGCTCAGGTAATTAACTACACTTTTTCTTTGATTTACCACCCCATTCAATTATTATTATACATTTCCTTTTTAATTAACTTATTTTGAAAATATGGGTTACGTACGTGGTTCTCCCCCAGGACAAAAATCAATTTATTTCGTCAACCTAATCATAGCTTAATTGGTTGAGACATATATCCTTGTTACTAAAAAAGCCAAAGATTCGACGTTGAACTAAATAAATGATTGTTTTTTTTTTTTTTAAGAATGGTAAGTTTTGAAAGTAATAATTTTTAGATAAATACTTTTCTTATACGCTTTTTTGCTTTTTTAAAGAAACACTAATTGAGGGTGGATTTGGAATGATATTTGGCGGTGATGGTAAATGAGTAATTTTGAAAAAGGAGATTTACGTATAATTGATATTTTAAAATCACCACTCCAGTGATGTCTTAAAAATCATTTTAAAGTGTTCTTAATTTGTCAAACATATCAATAAAAAATGAAGTGATTTTGACCACGGGAAAAATTATTTAAAGTACTTTTTTTTAAGTGTTTTTATAGATGGTTGCCAAATATATGGTACACCCTTGTCTAAAAGACCAAAAGCACAACTACTTCAACCTTTAAAAATTCTTACCCAATAAAAATTAGCTTGAAGTGTTTTCTCTCAAAGTACTTTTAAGGTGACCAAGCTAAGAAATCTCAATTTTATCTTAAAAATTGCTTCCGTCAAATTAGTGGCTTTCGAAAATGACGAACCCAATTAAAAATTAAAATACTACTTCGCCTCCTCACTTGAACACCATTACGTATTTGACAAGTAGAATAAAAAATTGCCCAAAAAAAACGATAGAATAGATATTTTATTGTAAAAAGTAAATAAATAATTATCAAATTTTAAGTATCATTCTAAAAAGTCACCCAACGATTTTTTTTTTCTTTAAATGCCAAATACCTTAAAAGTAGTTTCATGGTTAAAAAATACTTTTGATCGGTACTTTCACTAAAGTAACGATTTAGTTCCTGAACTTTAACGATTTAGTTCATGTACTTTCAAATTTGTAACAATTTAGTCCTTGAACCTTAACATGTAACAATTTAGTCATTGTAATTTAAAGTTGGTAATGATTTAGTTCTTATCGTGAAGTTTTCTTGTTAAGTTTCTTTTATATATCTATATATATATAGATTGATAAACCATAGAGGGACCAAACATGTTTATAAATTAGAAATATTAAATTGTTATATGATAAAATTTGACACTTAATTTTAATAAATTTTTTTACGATATGAATTAAATTGTTATAAATTTTAAACTATATGGACTAAATCATTACAAGCTGAAGTTCAGAGACTAAATTGTTATCTCAGTGAAATTACAGGGACTAAATCGTTACAAACTAAAATTCATGGACTAAATTATTACTTGAACGAAAGTACAGGAACCGAATGTGTTTTTTTAGGTCAGTTCATTCTGAATTGAGAAATCAGCTTTAATAATTTGAAAGGCAACGAAGGAGCTGAGAAGAATGGGAGTTGAAAGCAAGATTGTTGGAGTGACAGCGAATGGAGCAATTAGCTGTGAGAAGGCTGCCTTTATGGAGGCTGGTCTCGACCATTGCTTGATGAAGCCATTGACACTTGAAAATCTTCACTCTCTCCTCCAACAA

mRNA sequence

AAGAAAATAATAAGTGCTTTGGTTGTGGATGATGAGGCTGTGGTTAGATACATTCACATGTCTCTCCTCAGAAAGTTGAATGTTGAACAAGTTGAAGCAGCTGAAAGTGGAAAGGCAGCAGTTGATGCTTTCCAATGTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTCTCATGGATGGGGCTCAGGCAACGAAGGAGCTGAGAAGAATGGGAGTTGAAAGCAAGATTGTTGGAGTGACAGCGAATGGAGCAATTAGCTGTGAGAAGGCTGCCTTTATGGAGGCTGGTCTCGACCATTGCTTGATGAAGCCATTGACACTTGAAAATCTTCACTCTCTCCTCCAACAA

Coding sequence (CDS)

AAGAAAATAATAAGTGCTTTGGTTGTGGATGATGAGGCTGTGGTTAGATACATTCACATGTCTCTCCTCAGAAAGTTGAATGTTGAACAAGTTGAAGCAGCTGAAAGTGGAAAGGCAGCAGTTGATGCTTTCCAATGTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTCTCATGGATGGGGCTCAGGCAACGAAGGAGCTGAGAAGAATGGGAGTTGAAAGCAAGATTGTTGGAGTGACAGCGAATGGAGCAATTAGCTGTGAGAAGGCTGCCTTTATGGAGGCTGGTCTCGACCATTGCTTGATGAAGCCATTGACACTTGAAAATCTTCACTCTCTCCTCCAACAA

Protein sequence

KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ

Homology

[Close]

BLAST of MC08g1987 vs. ExPASy Swiss-Prot
Match: F4JZT3 (Two-component response regulator 24 OS=Arabidopsis thaliana OX=3702 GN=ARR24 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.2e-22
Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 4   ISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMD 63
           ++ALVVDD  V + IH  LL +L ++  +   +GK AVD +  G ++DL+LMD++MP+M+
Sbjct: 18  LTALVVDDSFVNQTIHQKLLNRLGIKN-DVVTNGKEAVDVYCSGGNYDLILMDMDMPIMN 77

Query: 64  GAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 121
           G QATK LR MG+ESKI GVT   A   EK  FMEAGL+    KPLT+  L S+L +
Sbjct: 78  GIQATKRLREMGIESKIAGVTTR-ANEGEKKEFMEAGLNDFQEKPLTISKLLSILHK 132

[Close]

BLAST of MC08g1987 vs. ExPASy Swiss-Prot
Match: Q9M8Y4 (Two-component response regulator ARR22 OS=Arabidopsis thaliana OX=3702 GN=ARR22 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCG-ASFDLVLMDLEM 60
           KK+I+ L+VDD+ + R +H  +++ +     + A++G+ AV   + G ASFDL+LMD EM
Sbjct: 19  KKLINVLIVDDDPLNRRLHEMIIKTIGGIS-QTAKNGEEAVILHRDGEASFDLILMDKEM 78

Query: 61  PLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 119
           P  DG   TK+LR M V S IVGVT+      E+ AFMEAGL+HCL KPLT   +  L+
Sbjct: 79  PERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLI 136

[Close]

BLAST of MC08g1987 vs. ExPASy Swiss-Prot
Match: Q75KW7 (Two-component response regulator ORR41 OS=Oryza sativa subsp. japonica OX=39947 GN=RR41 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13
Identity = 47/120 (39.17%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKL-NVEQVEAAESGKAAVDAFQ-CGASFDLVLMDLE 60
           +K+I  L+V+DE + R +  + L+     + V+ AE+G+ AV   +   A +DLVLMD +
Sbjct: 3   RKMIRVLLVEDEEINRVVARAALKAAGGGDVVDEAENGEVAVQRVRDAAAPYDLVLMDKQ 62

Query: 61  MPLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 119
           MP+MDG +AT+ +R MGV + IV V+++G +  +  AF+ AG D    KPL+ E L  +L
Sbjct: 63  MPVMDGHEATRRIRGMGVTTPIVAVSSDG-LPADVDAFITAGADDFTSKPLSKEKLGVIL 121

[Close]

BLAST of MC08g1987 vs. ExPASy Swiss-Prot
Match: Q56128 (Sensor histidine kinase RcsC OS=Salmonella typhi OX=90370 GN=rcsC PE=3 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 7   LVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMDGAQ 66
           LVVDD  + R +    L  L   Q + A  G  A++     A  D+VL D+ MP MDG +
Sbjct: 828 LVVDDHPINRRLLADQLGSLGY-QCKTANDGVDALNVLSKNA-IDIVLSDVNMPNMDGYR 887

Query: 67  ATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 119
            T+ +R++G+   +VGVTAN A++ EK   +E+G+D CL KP+TL+ L   L
Sbjct: 888 LTQRIRQLGLTLPVVGVTAN-ALAEEKQRCLESGMDSCLSKPVTLDALKQTL 936

[Close]

BLAST of MC08g1987 vs. ExPASy Swiss-Prot
Match: P58662 (Sensor histidine kinase RcsC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rcsC PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11
Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 7   LVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMDGAQ 66
           LVVDD  + R +    L  L   Q + A  G  A++     A  D+VL D+ MP MDG +
Sbjct: 828 LVVDDHPINRRLLADQLGSLGY-QCKTANDGVDALNVLSKNA-IDIVLSDVNMPNMDGYR 887

Query: 67  ATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 119
            T+ +R++G+   +VGVTAN A++ EK   +E+G+D CL KP+TL+ L   L
Sbjct: 888 LTQRIRQLGLTLPVVGVTAN-ALAEEKQRCLESGMDSCLSKPVTLDVLKQTL 936

[Close]

BLAST of MC08g1987 vs. NCBI nr
Match: XP_022144466.1 (two-component response regulator ARR22-like [Momordica charantia])

HSP 1 Score: 229 bits (585), Expect = 2.10e-75
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP 60
           KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP
Sbjct: 17  KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP 76

Query: 61  LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 120
           LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ
Sbjct: 77  LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 136

[Close]

BLAST of MC08g1987 vs. NCBI nr
Match: XP_038889283.1 (two-component response regulator 24-like [Benincasa hispida])

HSP 1 Score: 169 bits (428), Expect = 1.56e-51
Identity = 91/119 (76.47%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP 60
           +K +S LVVDDEAV R IHMSLL+KLNVE  EAAE+GK AV+AFQ GASFDLVLMDLEMP
Sbjct: 18  EKKVSGLVVDDEAVNRQIHMSLLKKLNVE-AEAAENGKEAVEAFQGGASFDLVLMDLEMP 77

Query: 61  LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQ 119
            MDG QATKELRRMGV+SKI+GVT +G  S +KAAFMEAGLDHC MKPLT+E+L +LLQ
Sbjct: 78  AMDGLQATKELRRMGVKSKIIGVTGHGPTSEKKAAFMEAGLDHCFMKPLTIESLQTLLQ 135

[Close]

BLAST of MC08g1987 vs. NCBI nr
Match: KAF3452388.1 (hypothetical protein FNV43_RR02821 [Rhamnella rubrinervis])

HSP 1 Score: 127 bits (320), Expect = 4.54e-35
Identity = 67/120 (55.83%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIH-MSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEM 60
           +K +S LVVDD+ V++ IH M L  K  +   + AE+GK AVD  +CGA FDL+LMD+EM
Sbjct: 16  EKRLSVLVVDDDPVIQKIHKMMLTNKFKISDTQVAENGKQAVDLHRCGAIFDLILMDMEM 75

Query: 61  PLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQ 119
           P+M+G QAT ELR MGVES IVGVT++G +  EK  F+ AGLD C  KPLT++ + SLLQ
Sbjct: 76  PIMNGVQATMELRAMGVESMIVGVTSHG-LDAEKQTFIGAGLDDCFAKPLTIQTISSLLQ 134

[Close]

BLAST of MC08g1987 vs. NCBI nr
Match: XP_015882017.1 (two-component response regulator 24 [Ziziphus jujuba])

HSP 1 Score: 126 bits (316), Expect = 1.29e-34
Identity = 64/115 (55.65%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 4   ISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMD 63
           IS LVVDD+ V++ IH  +L+K  + + + AE+GK A+D  +CGA FDL+LMD+EMP+M+
Sbjct: 7   ISVLVVDDDPVIQKIHKMMLKKCKIFETQVAENGKQAIDLHRCGAIFDLILMDMEMPIMN 66

Query: 64  GAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 118
           G QATKELR MGV+S IVGVT+ G+ S EK AF+ AGL+ C  KPLT++ + S L
Sbjct: 67  GIQATKELRAMGVDSMIVGVTSRGSDS-EKQAFIGAGLNDCFAKPLTIQIISSFL 120

[Close]

BLAST of MC08g1987 vs. NCBI nr
Match: KAA8519414.1 (hypothetical protein F0562_013711 [Nyssa sinensis])

HSP 1 Score: 126 bits (316), Expect = 1.95e-34
Identity = 70/117 (59.83%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 4   ISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMD 63
           I  L+VDD+   R IH +LL K  VE  + AE+GK AVD ++ GASFDLV+MD+EMP+MD
Sbjct: 21  ICVLIVDDDRATRRIHSALLNKFGVE-TQVAENGKEAVDLYRSGASFDLVIMDMEMPVMD 80

Query: 64  GAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 120
           G  AT+ELRRMGV S IVGVT+ G  S EK AFM AGLD C +KPL    + SLLQQ
Sbjct: 81  GPTATQELRRMGVNSMIVGVTSRGQDS-EKQAFMRAGLDDCHVKPLNSNTIASLLQQ 135

[Close]

BLAST of MC08g1987 vs. ExPASy TrEMBL
Match: A0A6J1CTH4 (two-component response regulator ARR22-like OS=Momordica charantia OX=3673 GN=LOC111014146 PE=4 SV=1)

HSP 1 Score: 229 bits (585), Expect = 1.02e-75
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP 60
           KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP
Sbjct: 17  KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP 76

Query: 61  LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 120
           LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ
Sbjct: 77  LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 136

[Close]

BLAST of MC08g1987 vs. ExPASy TrEMBL
Match: A0A6P4A8B9 (two-component response regulator 24 OS=Ziziphus jujuba OX=326968 GN=LOC107417876 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 6.24e-35
Identity = 64/115 (55.65%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 4   ISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMD 63
           IS LVVDD+ V++ IH  +L+K  + + + AE+GK A+D  +CGA FDL+LMD+EMP+M+
Sbjct: 7   ISVLVVDDDPVIQKIHKMMLKKCKIFETQVAENGKQAIDLHRCGAIFDLILMDMEMPIMN 66

Query: 64  GAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 118
           G QATKELR MGV+S IVGVT+ G+ S EK AF+ AGL+ C  KPLT++ + S L
Sbjct: 67  GIQATKELRAMGVDSMIVGVTSRGSDS-EKQAFIGAGLNDCFAKPLTIQIISSFL 120

[Close]

BLAST of MC08g1987 vs. ExPASy TrEMBL
Match: A0A5J4ZNK8 (Response regulatory domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013711 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 9.45e-35
Identity = 70/117 (59.83%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 4   ISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMD 63
           I  L+VDD+   R IH +LL K  VE  + AE+GK AVD ++ GASFDLV+MD+EMP+MD
Sbjct: 21  ICVLIVDDDRATRRIHSALLNKFGVE-TQVAENGKEAVDLYRSGASFDLVIMDMEMPVMD 80

Query: 64  GAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 120
           G  AT+ELRRMGV S IVGVT+ G  S EK AFM AGLD C +KPL    + SLLQQ
Sbjct: 81  GPTATQELRRMGVNSMIVGVTSRGQDS-EKQAFMRAGLDDCHVKPLNSNTIASLLQQ 135

[Close]

BLAST of MC08g1987 vs. ExPASy TrEMBL
Match: A0A5C7IAF2 (Response regulatory domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_007439 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 2.12e-33
Identity = 68/120 (56.67%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP 60
           KK +SAL+VDD+ V+R IH  +LR L V+  E A +GK AVD F+ GA+FD+V MDLEMP
Sbjct: 10  KKQVSALIVDDDRVIRKIHSMILRSLKVKS-EMAVNGKEAVDLFRSGANFDIVFMDLEMP 69

Query: 61  LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 120
           +M+G +ATKELR MGV  KIVGVT+    +  K AF+EAGLD C +KPLT+  +  LL+Q
Sbjct: 70  IMNGIEATKELRAMGVTCKIVGVTSRD--NEVKEAFLEAGLDFCHLKPLTVAKVTPLLEQ 126

[Close]

BLAST of MC08g1987 vs. ExPASy TrEMBL
Match: A0A438D7E0 (Two-component response regulator ARR22 OS=Vitis vinifera OX=29760 GN=ARR22_8 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 2.32e-33
Identity = 65/117 (55.56%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 4   ISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMD 63
           IS L+VDD+ + R IH  LL K+ +E  +A E+GK AVD ++ GASFDL+LMDLEMP+MD
Sbjct: 11  ISTLIVDDDPLTRRIHKVLLTKVGLE-TQAVENGKEAVDLYRSGASFDLILMDLEMPIMD 70

Query: 64  GAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 120
           G +ATKELR MGV+S IVGVTA   +  EK  FM +GLD C +KPLT + + +L+++
Sbjct: 71  GPKATKELRAMGVQSMIVGVTARD-LEVEKQMFMASGLDDCYVKPLTTDTVTALVEK 125

[Close]

BLAST of MC08g1987 vs. TAIR 10
Match: AT5G26594.1 (response regulator 24 )

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23
Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 4   ISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMD 63
           ++ALVVDD  V + IH  LL +L ++  +   +GK AVD +  G ++DL+LMD++MP+M+
Sbjct: 18  LTALVVDDSFVNQTIHQKLLNRLGIKN-DVVTNGKEAVDVYCSGGNYDLILMDMDMPIMN 77

Query: 64  GAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 121
           G QATK LR MG+ESKI GVT   A   EK  FMEAGL+    KPLT+  L S+L +
Sbjct: 78  GIQATKRLREMGIESKIAGVTTR-ANEGEKKEFMEAGLNDFQEKPLTISKLLSILHK 132

[Close]

BLAST of MC08g1987 vs. TAIR 10
Match: AT3G04280.1 (response regulator 22 )

HSP 1 Score: 94.0 bits (232), Expect = 8.9e-20
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCG-ASFDLVLMDLEM 60
           KK+I+ L+VDD+ + R +H  +++ +     + A++G+ AV   + G ASFDL+LMD EM
Sbjct: 19  KKLINVLIVDDDPLNRRLHEMIIKTIGGIS-QTAKNGEEAVILHRDGEASFDLILMDKEM 78

Query: 61  PLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 119
           P  DG   TK+LR M V S IVGVT+      E+ AFMEAGL+HCL KPLT   +  L+
Sbjct: 79  PERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLI 136

[Close]

BLAST of MC08g1987 vs. TAIR 10
Match: AT3G04280.2 (response regulator 22 )

HSP 1 Score: 94.0 bits (232), Expect = 8.9e-20
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCG-ASFDLVLMDLEM 60
           KK+I+ L+VDD+ + R +H  +++ +     + A++G+ AV   + G ASFDL+LMD EM
Sbjct: 19  KKLINVLIVDDDPLNRRLHEMIIKTIGGIS-QTAKNGEEAVILHRDGEASFDLILMDKEM 78

Query: 61  PLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 119
           P  DG   TK+LR M V S IVGVT+      E+ AFMEAGL+HCL KPLT   +  L+
Sbjct: 79  PERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLI 136

[Close]

BLAST of MC08g1987 vs. TAIR 10
Match: AT3G04280.3 (response regulator 22 )

HSP 1 Score: 94.0 bits (232), Expect = 8.9e-20
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 1   KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCG-ASFDLVLMDLEM 60
           KK+I+ L+VDD+ + R +H  +++ +     + A++G+ AV   + G ASFDL+LMD EM
Sbjct: 19  KKLINVLIVDDDPLNRRLHEMIIKTIGGIS-QTAKNGEEAVILHRDGEASFDLILMDKEM 78

Query: 61  PLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLL 119
           P  DG   TK+LR M V S IVGVT+      E+ AFMEAGL+HCL KPLT   +  L+
Sbjct: 79  PERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLI 136

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BLAST of MC08g1987 vs. TAIR 10
Match: AT2G01830.2 (CHASE domain containing histidine kinase protein )

HSP 1 Score: 63.9 bits (154), Expect = 9.9e-11
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 7    LVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMPLMDGAQ 66
            LVVDD  V R +    L+K   E V  AESG+ A+   Q   +FD   MD++MP MDG +
Sbjct: 948  LVVDDNIVNRRVAAGALKKFGAE-VVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGFE 1007

Query: 67   ATKELRRMGVESK----------IVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLH 116
            AT+++R M  E+K          I+ +TA+  I       +++G+D  + KP   ENL+
Sbjct: 1008 ATRQIRMMEKETKEKTNLEWHLPILAMTAD-VIHATYEECLKSGMDGYVSKPFEEENLY 1064

The following BLAST results are available for this feature:

BLAST of MC08g1987 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JZT3	3.2e-22	49.57	Two-component response regulator 24 OS=Arabidopsis thaliana OX=3702 GN=ARR24 PE=...	[more]
Q9M8Y4	1.3e-18	46.22	Two-component response regulator ARR22 OS=Arabidopsis thaliana OX=3702 GN=ARR22 ...	[more]
Q75KW7	2.7e-13	39.17	Two-component response regulator ORR41 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q56128	1.1e-11	40.18	Sensor histidine kinase RcsC OS=Salmonella typhi OX=90370 GN=rcsC PE=3 SV=2	[more]
P58662	1.5e-11	40.18	Sensor histidine kinase RcsC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ...	[more]

BLAST of MC08g1987 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144466.1	2.10e-75	100.00	two-component response regulator ARR22-like [Momordica charantia]	[more]
XP_038889283.1	1.56e-51	76.47	two-component response regulator 24-like [Benincasa hispida]	[more]
KAF3452388.1	4.54e-35	55.83	hypothetical protein FNV43_RR02821 [Rhamnella rubrinervis]	[more]
XP_015882017.1	1.29e-34	55.65	two-component response regulator 24 [Ziziphus jujuba]	[more]
KAA8519414.1	1.95e-34	59.83	hypothetical protein F0562_013711 [Nyssa sinensis]	[more]

BLAST of MC08g1987 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTH4	1.02e-75	100.00	two-component response regulator ARR22-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6P4A8B9	6.24e-35	55.65	two-component response regulator 24 OS=Ziziphus jujuba OX=326968 GN=LOC107417876...	[more]
A0A5J4ZNK8	9.45e-35	59.83	Response regulatory domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05...	[more]
A0A5C7IAF2	2.12e-33	56.67	Response regulatory domain-containing protein OS=Acer yangbiense OX=1000413 GN=E...	[more]
A0A438D7E0	2.32e-33	55.56	Two-component response regulator ARR22 OS=Vitis vinifera OX=29760 GN=ARR22_8 PE=...	[more]

BLAST of MC08g1987 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26594.1	2.3e-23	49.57	response regulator 24	[more]
AT3G04280.1	8.9e-20	46.22	response regulator 22	[more]
AT3G04280.2	8.9e-20	46.22	response regulator 22	[more]
AT3G04280.3	8.9e-20	46.22	response regulator 22	[more]
AT2G01830.2	9.9e-11	36.13	CHASE domain containing histidine kinase protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 4..118 e-value: 2.2E-24 score: 97.0
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 7..118 e-value: 4.9E-23 score: 81.4
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 5..120 score: 34.208916
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..120 e-value: 1.5E-30 score: 107.8
None	No IPR available	PANTHER	PTHR43228:SF12	TWO-COMPONENT RESPONSE REGULATOR 24	coord: 2..119
None	No IPR available	PANTHER	PTHR43228	TWO-COMPONENT RESPONSE REGULATOR	coord: 2..119
None	No IPR available	CDD	cd17546	REC_hyHK_CKI1_RcsC-like	coord: 7..118 e-value: 2.03464E-33 score: 110.637
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 5..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1987.1	MC08g1987.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity