MC08g1682 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1682
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	BZIP transcription factor
Location	MC08: 24804667 .. 24804816 (+)
RNA-Seq Expression	MC08g1682
Synteny	MC08g1682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGAAGATCTATGGCAAAACGTGGGTAAGAGGAAGAGGAAAAGAATGATATTGAATCGAAAATCGACCCACCGGTCGAGGATGCGAAAGCATAAACAGCTCGAAAATCTGACGGTTCAGGTGGGCCAAATCAGGACCGAGAACGAGCAA

mRNA sequence

GATGAAGATCTATGGCAAAACGTGGGTAAGAGGAAGAGGAAAAGAATGATATTGAATCGAAAATCGACCCACCGGTCGAGGATGCGAAAGCATAAACAGCTCGAAAATCTGACGGTTCAGGTGGGCCAAATCAGGACCGAGAACGAGCAA

Coding sequence (CDS)

GATGAAGATCTATGGCAAAACGTGGGTAAGAGGAAGAGGAAAAGAATGATATTGAATCGAAAATCGACCCACCGGTCGAGGATGCGAAAGCATAAACAGCTCGAAAATCTGACGGTTCAGGTGGGCCAAATCAGGACCGAGAACGAGCAA

Protein sequence

DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ

Homology

[Close]

BLAST of MC08g1682 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 3.6e-04
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 8  VGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 51
          V +RKRKRM+ NR+S  RSRMRK K +++LT Q+ Q+  +N Q
Sbjct: 28 VDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQ 70

[Close]

BLAST of MC08g1682 vs. NCBI nr
Match: AOZ56991.1 (bZIP2 [Citrullus lanatus])

HSP 1 Score: 67.4 bits (163), Expect = 2.21e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL Q V +RKRKRMI NR+S  RSRMRK KQL++LT QVGQIRTENEQ
Sbjct: 15 DEDLRQIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRTENEQ 64

[Close]

BLAST of MC08g1682 vs. NCBI nr
Match: XP_038897679.1 (bZIP transcription factor 44-like [Benincasa hispida])

HSP 1 Score: 67.4 bits (163), Expect = 2.21e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL Q V +RKRKRMI NR+S  RSRMRK KQL++LT QVGQIRTENEQ
Sbjct: 15 DEDLRQIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRTENEQ 64

[Close]

BLAST of MC08g1682 vs. NCBI nr
Match: XP_022136835.1 (bZIP transcription factor 44-like [Momordica charantia])

HSP 1 Score: 65.9 bits (159), Expect = 8.96e-12
Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL Q V +RKRKRMI NR+S  RSRMRK KQL++LTVQV QIR+ENEQ
Sbjct: 15 DEDLRQIVDQRKRKRMISNRESARRSRMRKQKQLDDLTVQVAQIRSENEQ 64

[Close]

BLAST of MC08g1682 vs. NCBI nr
Match: XP_011653153.1 (bZIP transcription factor 44 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 2.47e-11
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL   V +RKRKRMI NR+S  RSRMRK KQL++LT QVGQIRTENEQ
Sbjct: 15 DEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRTENEQ 64

[Close]

BLAST of MC08g1682 vs. NCBI nr
Match: KAA0044785.1 (bZIP transcription factor 53 [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 2.52e-11
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL   V +RKRKRMI NR+S  RSRMRK KQL++LT QVGQIRTENEQ
Sbjct: 15 DEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRTENEQ 64

[Close]

BLAST of MC08g1682 vs. ExPASy TrEMBL
Match: A0A1I9RYK7 (BZIP2 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.07e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL Q V +RKRKRMI NR+S  RSRMRK KQL++LT QVGQIRTENEQ
Sbjct: 15 DEDLRQIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRTENEQ 64

[Close]

BLAST of MC08g1682 vs. ExPASy TrEMBL
Match: A0A6J1C522 (bZIP transcription factor 44-like OS=Momordica charantia OX=3673 GN=LOC111008436 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.34e-12
Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL Q V +RKRKRMI NR+S  RSRMRK KQL++LTVQV QIR+ENEQ
Sbjct: 15 DEDLRQIVDQRKRKRMISNRESARRSRMRKQKQLDDLTVQVAQIRSENEQ 64

[Close]

BLAST of MC08g1682 vs. ExPASy TrEMBL
Match: A0A0A0KZH6 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G045060 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.20e-11
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL   V +RKRKRMI NR+S  RSRMRK KQL++LT QVGQIRTENEQ
Sbjct: 15 DEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRTENEQ 64

[Close]

BLAST of MC08g1682 vs. ExPASy TrEMBL
Match: A0A5D3CZ93 (BZIP transcription factor 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005110 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.22e-11
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL   V +RKRKRMI NR+S  RSRMRK KQL++LT QVGQIRTENEQ
Sbjct: 15 DEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRTENEQ 64

[Close]

BLAST of MC08g1682 vs. ExPASy TrEMBL
Match: A0A5A7TTR6 (BZIP transcription factor 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00750 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.22e-11
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1  DEDLWQNVGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 50
          DEDL   V +RKRKRMI NR+S  RSRMRK KQL++LT QVGQIRTENEQ
Sbjct: 15 DEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRTENEQ 64

[Close]

BLAST of MC08g1682 vs. TAIR 10
Match: AT2G18160.1 (basic leucine-zipper 2 )

HSP 1 Score: 44.7 bits (104), Expect = 2.6e-05
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 8  VGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 51
          V +RKRKRM+ NR+S  RSRMRK K +++LT Q+ Q+  +N Q
Sbjct: 28 VDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQ 70

[Close]

BLAST of MC08g1682 vs. TAIR 10
Match: AT1G75390.1 (basic leucine-zipper 44 )

HSP 1 Score: 42.0 bits (97), Expect = 1.7e-04
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 1  DEDLWQN--VGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 51
          + DL Q   + +RKRKR   NR+S  RSRMRK K L++LT QV  +R EN Q
Sbjct: 29 ESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLRKENAQ 80

[Close]

BLAST of MC08g1682 vs. TAIR 10
Match: AT1G75390.2 (basic leucine-zipper 44 )

HSP 1 Score: 42.0 bits (97), Expect = 1.7e-04
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 1  DEDLWQN--VGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 51
          + DL Q   + +RKRKR   NR+S  RSRMRK K L++LT QV  +R EN Q
Sbjct: 29 ESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLRKENAQ 80

[Close]

BLAST of MC08g1682 vs. TAIR 10
Match: AT4G34590.1 (G-box binding factor 6 )

HSP 1 Score: 40.8 bits (94), Expect = 3.7e-04
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 10 KRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 51
          +RKRKRM+ NR+S  RSRM+K K L++LT QV  ++ EN +
Sbjct: 26 QRKRKRMLSNRESARRSRMKKQKLLDDLTAQVNHLKKENTE 66

[Close]

BLAST of MC08g1682 vs. TAIR 10
Match: AT5G15830.1 (basic leucine-zipper 3 )

HSP 1 Score: 40.4 bits (93), Expect = 4.9e-04
Identity = 21/43 (48.84%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 8   VGKRKRKRMILNRKSTHRSRMRKHKQLENLTVQVGQIRTENEQ 51
           + +RK++RM+ NR+S  RSRMRK + L+ L  QV  +R+EN Q
Sbjct: 71  INERKQRRMVSNRESARRSRMRKQRHLDELLSQVAWLRSENHQ 113

The following BLAST results are available for this feature:

BLAST of MC08g1682 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SI15	3.6e-04	53.49	bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1	[more]

BLAST of MC08g1682 vs. NCBI nr


Match Name	E-value	Identity	Description
AOZ56991.1	2.21e-12	76.00	bZIP2 [Citrullus lanatus]	[more]
XP_038897679.1	2.21e-12	76.00	bZIP transcription factor 44-like [Benincasa hispida]	[more]
XP_022136835.1	8.96e-12	74.00	bZIP transcription factor 44-like [Momordica charantia]	[more]
XP_011653153.1	2.47e-11	74.00	bZIP transcription factor 44 [Cucumis sativus]	[more]
KAA0044785.1	2.52e-11	74.00	bZIP transcription factor 53 [Cucumis melo var. makuwa]	[more]

BLAST of MC08g1682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1I9RYK7	1.07e-12	76.00	BZIP2 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1C522	4.34e-12	74.00	bZIP transcription factor 44-like OS=Momordica charantia OX=3673 GN=LOC111008436...	[more]
A0A0A0KZH6	1.20e-11	74.00	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G045060 PE=4 S...	[more]
A0A5D3CZ93	1.22e-11	74.00	BZIP transcription factor 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7TTR6	1.22e-11	74.00	BZIP transcription factor 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of MC08g1682 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18160.1	2.6e-05	53.49	basic leucine-zipper 2	[more]
AT1G75390.1	1.7e-04	51.92	basic leucine-zipper 44	[more]
AT1G75390.2	1.7e-04	51.92	basic leucine-zipper 44	[more]
AT4G34590.1	3.7e-04	53.66	G-box binding factor 6	[more]
AT5G15830.1	4.9e-04	48.84	basic leucine-zipper 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.5.170		coord: 10..50 e-value: 7.8E-6 score: 27.8
None	No IPR available	PANTHER	PTHR45764:SF54	BASIC-LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..50
None	No IPR available	PANTHER	PTHR45764	BZIP TRANSCRIPTION FACTOR 44	coord: 1..50
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 11..49
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 11..50 e-value: 7.1E-7 score: 29.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1682.1	MC08g1682.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding