MC08g1255 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1255
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ras-related protein Rab-2A
Location	MC08: 10865867 .. 10866829 (+)
RNA-Seq Expression	MC08g1255
Synteny	MC08g1255

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGATTACTGTTTCAAGTACATCCTCATCGGAGATGCAGGTTTATTTTTCTGGATATGAATTAGTCTTTGTTCTTTTTTAATCTAATTCTTTTTTTGAAATTGTATCAATATTCAAATCTTCTATCTCAAAACCAAAACCAAAACCAATTAATAAGAAAGGAGTAGCCCACTTTTCAACGTGGATTGTGAGAATTTTTTTGTTGTCGGTTTTTGCAGGCGTGGGAAAATCTTGTCTCATGTTACAATTTACATACGACCGATTTCAGCCGATTCATGATGTGACGATCGGTGCGGAATTTGGTTCTCGAATTGTCAACATTAATGGCGGACATATCAAACTTCAAATATGGGATACTGTAAGTACCTTTTTTTTTTACAAATTCCACTCCTATTTTTCCAAGTCCAACCTATTTACATTAGTGGTTTGATTTAAATAATTCGAAGAAGATATATAATAATATGTTTGCTAAACCCTACTGGTACTGGATAGAGAATTTCTTTTCGTGTCGATAATAACATAATATAATTTAATTACAGGCTGGACAAGAAAAATTCAGATCAATTACAAGATTTTACTATAGAGGAGCGGCCGCAGCTCTTTTAGTTTATGATATAACTAGGTAAATTACATTTTCATTTATTTCTAATTATTTTCTAAAAATCTAACTAAATTAGGATTTCAGTTTTGAACATGAAAAAGCATATCCTAGTATTTTAGTAAATTAACACTAAATTAATTATTATTAGGAGAGAGACATTTGATAATTTAGCAAGCTGGCTAGAGGACGTTCGACAGCAAGCAAATTCGAACATGACAATTATGCTGGTCGGGAACAAAGCAGATCTCACTCATCAAAGACTTGTAAGCAAAGAAGAGGGAGAACAATTTGCCAAACAGAATGGACTCTTATTCTTGGAGGCTTCTTCTAAAACATTTCTAAATGTCGAGGATGTGAGTTTT

mRNA sequence

TACGATTACTGTTTCAAGTACATCCTCATCGGAGATGCAGGCGTGGGAAAATCTTGTCTCATGTTACAATTTACATACGACCGATTTCAGCCGATTCATGATGTGACGATCGGTGCGGAATTTGGTTCTCGAATTGTCAACATTAATGGCGGACATATCAAACTTCAAATATGGGATACTGCTGGACAAGAAAAATTCAGATCAATTACAAGATTTTACTATAGAGGAGCGGCCGCAGCTCTTTTAGTTTATGATATAACTAGGAGAGAGACATTTGATAATTTAGCAAGCTGGCTAGAGGACGTTCGACAGCAAGCAAATTCGAACATGACAATTATGCTGGTCGGGAACAAAGCAGATCTCACTCATCAAAGACTTGTAAGCAAAGAAGAGGGAGAACAATTTGCCAAACAGAATGGACTCTTATTCTTGGAGGCTTCTTCTAAAACATTTCTAAATGTCGAGGATGTGAGTTTT

Coding sequence (CDS)

TACGATTACTGTTTCAAGTACATCCTCATCGGAGATGCAGGCGTGGGAAAATCTTGTCTCATGTTACAATTTACATACGACCGATTTCAGCCGATTCATGATGTGACGATCGGTGCGGAATTTGGTTCTCGAATTGTCAACATTAATGGCGGACATATCAAACTTCAAATATGGGATACTGCTGGACAAGAAAAATTCAGATCAATTACAAGATTTTACTATAGAGGAGCGGCCGCAGCTCTTTTAGTTTATGATATAACTAGGAGAGAGACATTTGATAATTTAGCAAGCTGGCTAGAGGACGTTCGACAGCAAGCAAATTCGAACATGACAATTATGCTGGTCGGGAACAAAGCAGATCTCACTCATCAAAGACTTGTAAGCAAAGAAGAGGGAGAACAATTTGCCAAACAGAATGGACTCTTATTCTTGGAGGCTTCTTCTAAAACATTTCTAAATGTCGAGGATGTGAGTTTT

Protein sequence

YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDTAGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKADLTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVEDVSF

Homology

[Close]

BLAST of MC08g1255 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.2e-66
Identity = 118/156 (75.64%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V ++G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN NM+IML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 157
           L H+R VSKEEG+QFAK++GLLFLEAS++T  NVE+
Sbjct: 123 LAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. ExPASy Swiss-Prot
Match: Q39570 (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-65
Identity = 117/156 (75.00%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           Y Y FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R++NI+G  IKLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN NMTIML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 157
           LTH+R V+ EEGEQFAK++GL+FLE S++T  NVE+
Sbjct: 123 LTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEE 158

[Close]

BLAST of MC08g1255 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-65
Identity = 117/156 (75.00%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           Y Y FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R++NI+G  IKLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN NMTIML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 157
           LTH+R V+ EEGEQFAK++GL+FLE S++T  NVE+
Sbjct: 123 LTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEE 158

[Close]

BLAST of MC08g1255 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-64
Identity = 117/156 (75.00%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           Y Y FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R++ I+   IKLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN+NMTIMLVGNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 157
           L+H+R VS EEGEQFAK++GL+F+EAS+KT  NVE+
Sbjct: 123 LSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-64
Identity = 117/156 (75.00%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           Y Y FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R++ I+   IKLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN+NMTIMLVGNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 157
           L+H+R VS EEGEQFAK++GL+F+EAS+KT  NVE+
Sbjct: 123 LSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. NCBI nr
Match: XP_022152163.1 (ras-related protein RABB1b-like [Momordica charantia])

HSP 1 Score: 290 bits (742), Expect = 1.40e-97
Identity = 142/145 (97.93%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 12  DAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDTAGQEKFRSITR 71
           D  VGKSCLMLQFTY+RFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDTAGQEKFRSITR
Sbjct: 15  DPSVGKSCLMLQFTYNRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDTAGQEKFRSITR 74

Query: 72  FYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKADLTHQRLVSKEE 131
           FYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKADLTHQRLVSKEE
Sbjct: 75  FYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKADLTHQRLVSKEE 134

Query: 132 GEQFAKQNGLLFLEASSKTFLNVED 156
           GEQFAKQNGLLFLEASSKTFLNVED
Sbjct: 135 GEQFAKQNGLLFLEASSKTFLNVED 159

[Close]

BLAST of MC08g1255 vs. NCBI nr
Match: XP_022869790.1 (ras-related protein RABB1b [Olea europaea var. sylvestris])

HSP 1 Score: 259 bits (663), Expect = 3.51e-86
Identity = 123/159 (77.36%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V I+G  +KLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPLKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN NMTIMLVGNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLVGNKSD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVEDVSF 159
           L H+R VSKEEGEQFAK+NGLLFLEAS++T  NVE+V +
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEVPY 161

[Close]

BLAST of MC08g1255 vs. NCBI nr
Match: XP_022152162.1 (ras-related protein RABB1b [Momordica charantia])

HSP 1 Score: 259 bits (663), Expect = 1.50e-85
Identity = 124/156 (79.49%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V I+G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ ANSNM+IMLVGNKAD
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMSIMLVGNKAD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 156
           L H+R VSKEEGEQFAK+NGLLFLEAS++T  NVE+
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. NCBI nr
Match: KAA8530168.1 (hypothetical protein F0562_004877 [Nyssa sinensis])

HSP 1 Score: 259 bits (663), Expect = 1.50e-85
Identity = 123/156 (78.85%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V I+G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN NMTIML+GNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 156
           LTH+R VSKEEGEQFAK+NGLLFLEAS++T  NVE+
Sbjct: 123 LTHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. NCBI nr
Match: XP_012071681.1 (ras-related protein RABB1b [Jatropha curcas] >KDP46387.1 hypothetical protein JCGZ_10227 [Jatropha curcas])

HSP 1 Score: 259 bits (662), Expect = 2.13e-85
Identity = 123/156 (78.85%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V I+G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ ANSNMTIML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 156
           L H+R VSKEEGEQFAK+NGLLFLEAS++T  NVE+
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. ExPASy TrEMBL
Match: A0A6J1DE45 (ras-related protein RABB1b-like OS=Momordica charantia OX=3673 GN=LOC111019952 PE=4 SV=1)

HSP 1 Score: 290 bits (742), Expect = 6.79e-98
Identity = 142/145 (97.93%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 12  DAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDTAGQEKFRSITR 71
           D  VGKSCLMLQFTY+RFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDTAGQEKFRSITR
Sbjct: 15  DPSVGKSCLMLQFTYNRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDTAGQEKFRSITR 74

Query: 72  FYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKADLTHQRLVSKEE 131
           FYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKADLTHQRLVSKEE
Sbjct: 75  FYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKADLTHQRLVSKEE 134

Query: 132 GEQFAKQNGLLFLEASSKTFLNVED 156
           GEQFAKQNGLLFLEASSKTFLNVED
Sbjct: 135 GEQFAKQNGLLFLEASSKTFLNVED 159

[Close]

BLAST of MC08g1255 vs. ExPASy TrEMBL
Match: A0A5J5AJ19 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004877 PE=4 SV=1)

HSP 1 Score: 259 bits (663), Expect = 7.27e-86
Identity = 123/156 (78.85%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V I+G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN NMTIML+GNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 156
           LTH+R VSKEEGEQFAK+NGLLFLEAS++T  NVE+
Sbjct: 123 LTHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. ExPASy TrEMBL
Match: A0A6J1DFF6 (ras-related protein RABB1b OS=Momordica charantia OX=3673 GN=LOC111019951 PE=4 SV=1)

HSP 1 Score: 259 bits (663), Expect = 7.27e-86
Identity = 124/156 (79.49%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V I+G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ ANSNM+IMLVGNKAD
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMSIMLVGNKAD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 156
           L H+R VSKEEGEQFAK+NGLLFLEAS++T  NVE+
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. ExPASy TrEMBL
Match: A0A067LDB3 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10227 PE=4 SV=1)

HSP 1 Score: 259 bits (662), Expect = 1.03e-85
Identity = 123/156 (78.85%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V I+G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ ANSNMTIML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 156
           L H+R VSKEEGEQFAK+NGLLFLEAS++T  NVE+
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. ExPASy TrEMBL
Match: A0A2G3DA25 (GTP-binding protein YPTC4 OS=Capsicum chinense OX=80379 GN=BC332_06117 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 2.08e-85
Identity = 123/156 (78.85%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V I+G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN NMTIMLVGNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLVGNKSD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 156
           L+H+R VSKEEGEQFAK+NGLLFLEAS++T  NVE+
Sbjct: 123 LSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 251.5 bits (641), Expect = 4.4e-67
Identity = 118/156 (75.64%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R+V ++G  IKLQIWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN NM+IML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 157
           L H+R VSKEEG+QFAK++GLLFLEAS++T  NVE+
Sbjct: 123 LAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-65
Identity = 116/156 (74.36%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           Y Y FKYI+IGD GVGKSCL+LQFT  RFQP+HD+TIG EFG+R++ I+   IKLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRSITR YYRGAA ALLVYDITRRETF++LASWLED RQ AN+NMTIML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 157
           L H+R VS EEGEQFAK++GL+F+EAS+KT  NVE+
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEE 158

[Close]

BLAST of MC08g1255 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 224.6 bits (571), Expect = 5.8e-59
Identity = 105/156 (67.31%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           Y Y FKYI+IGD GVGKSCL+L+FT  RFQ +HD+TIG EFG++ + I+   IKLQIWDT
Sbjct: 3   YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDT 62

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE FRS+TR YYRG A  LLVYDITRRETF++LASWLE+ RQ A+ NMT ML+GNK D
Sbjct: 63  AGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCD 122

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVED 157
           L  +R VS EEGEQFA+++GL+F+EAS+KT  NVE+
Sbjct: 123 LEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEE 158

[Close]

BLAST of MC08g1255 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 177.9 bits (450), Expect = 6.2e-45
Identity = 84/155 (54.19%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FK +LIGD+GVGKS ++ +FT + F      TIG EF +R   + G  IK QIWDT
Sbjct: 9   YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDT 68

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE++R+IT  YYRGA  ALLVYDIT+R+TFDN+  WL ++R  A+SN+ IM+ GNK+D
Sbjct: 69  AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSD 128

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVE 156
           L H R V++E+G+  A++ GL FLE S+    NVE
Sbjct: 129 LNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVE 163

[Close]

BLAST of MC08g1255 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-44
Identity = 83/155 (53.55%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   YDYCFKYILIGDAGVGKSCLMLQFTYDRFQPIHDVTIGAEFGSRIVNINGGHIKLQIWDT 60
           YDY FK +LIGD+GVGK+ ++ +FT + F      TIG EF +R + + G  +K QIWDT
Sbjct: 9   YDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68

Query: 61  AGQEKFRSITRFYYRGAAAALLVYDITRRETFDNLASWLEDVRQQANSNMTIMLVGNKAD 120
           AGQE++R+IT  YYRGA  ALLVYDIT+R+TFDN+  WL ++R  A+SN+ IM+ GNKAD
Sbjct: 69  AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKAD 128

Query: 121 LTHQRLVSKEEGEQFAKQNGLLFLEASSKTFLNVE 156
           L H R V++E+G+  A+  GL FLE S+    NVE
Sbjct: 129 LNHLRSVAEEDGQTLAETEGLSFLETSALEATNVE 163

The following BLAST results are available for this feature:

BLAST of MC08g1255 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38922	6.2e-66	75.64	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
Q39570	1.8e-65	75.00	GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=...	[more]
P36863	1.8e-65	75.00	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]
P49103	1.2e-64	75.00	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
P49104	1.2e-64	75.00	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]

BLAST of MC08g1255 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152163.1	1.40e-97	97.93	ras-related protein RABB1b-like [Momordica charantia]	[more]
XP_022869790.1	3.51e-86	77.36	ras-related protein RABB1b [Olea europaea var. sylvestris]	[more]
XP_022152162.1	1.50e-85	79.49	ras-related protein RABB1b [Momordica charantia]	[more]
KAA8530168.1	1.50e-85	78.85	hypothetical protein F0562_004877 [Nyssa sinensis]	[more]
XP_012071681.1	2.13e-85	78.85	ras-related protein RABB1b [Jatropha curcas] >KDP46387.1 hypothetical protein JC...	[more]

BLAST of MC08g1255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DE45	6.79e-98	97.93	ras-related protein RABB1b-like OS=Momordica charantia OX=3673 GN=LOC111019952 P...	[more]
A0A5J5AJ19	7.27e-86	78.85	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004877 PE=4 SV=1	[more]
A0A6J1DFF6	7.27e-86	79.49	ras-related protein RABB1b OS=Momordica charantia OX=3673 GN=LOC111019951 PE=4 S...	[more]
A0A067LDB3	1.03e-85	78.85	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10227 PE=4 SV=1	[more]
A0A2G3DA25	2.08e-85	78.85	GTP-binding protein YPTC4 OS=Capsicum chinense OX=80379 GN=BC332_06117 PE=4 SV=1	[more]

BLAST of MC08g1255 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35860.1	4.4e-67	75.64	GTP-binding 2	[more]
AT4G17170.1	1.1e-65	74.36	RAB GTPase homolog B1C	[more]
AT4G17160.1	5.8e-59	67.31	RAB GTPase homolog B1A	[more]
AT3G46830.1	6.2e-45	54.19	RAB GTPase homolog A2C	[more]
AT5G59150.1	1.4e-44	53.55	RAB GTPase homolog A2D	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 28..44 score: 30.16 coord: 108..121 score: 52.74 coord: 46..68 score: 51.94 coord: 5..26 score: 49.25 coord: 143..159 score: 28.26
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 10..159 e-value: 0.0047 score: -4.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..159 e-value: 2.5E-24 score: 96.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 5..157 e-value: 1.2E-85 score: 300.5
None	No IPR available	PANTHER	PTHR47979:SF67	RAS-RELATED PROTEIN RAB-2-A	coord: 1..156
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..156
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..159 score: 8.649075
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..159 score: 31.813046
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 7..158 e-value: 4.9E-10 score: 9.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 6..157 e-value: 3.9E-57 score: 192.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..159 score: 17.489841
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..159 e-value: 4.2E-63 score: 214.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..157
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 3..156 e-value: 3.9E-29 score: 99.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1255.1	MC08g1255.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030100	regulation of endocytosis
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding