MC08g1204 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g1204
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 10382666 .. 10382968 (+)
RNA-Seq ExpressionMC08g1204
SyntenyMC08g1204
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCAAATAGCCGAAAGCGCAAAGGGTTCATGAAAGGGAAGTTGATGCCTTTGTACAAGCAATATAGTGGGAGCAAGACGAAACAAAGTGGTTTGGTTGGCTATGTCTTCCATCGGGACTATACTATTTCTCAACACAAAGTTTCTTTTCTAGTTCAAGAGACGAGTGTCGGACGGGATACAACTGGAGCGACTCGTGACTCGTTGAGTCAGTTCGATAACCCATATGGAATTGCCCCGGATGAAGGCGTCAACCTCAAGGCTGCAAACTATATTTCTTCAACTCTAGCGCGATTCAAG

mRNA sequence

ATGGAAGCAAATAGCCGAAAGCGCAAAGGGTTCATGAAAGGGAAGTTGATGCCTTTGTACAAGCAATATAGTGGGAGCAAGACGAAACAAAGTGGTTTGGTTGGCTATGTCTTCCATCGGGACTATACTATTTCTCAACACAAAGTTTCTTTTCTAGTTCAAGAGACGAGTGTCGGACGGGATACAACTGGAGCGACTCGTGACTCGTTGAGTCAGTTCGATAACCCATATGGAATTGCCCCGGATGAAGGCGTCAACCTCAAGGCTGCAAACTATATTTCTTCAACTCTAGCGCGATTCAAG

Coding sequence (CDS)

ATGGAAGCAAATAGCCGAAAGCGCAAAGGGTTCATGAAAGGGAAGTTGATGCCTTTGTACAAGCAATATAGTGGGAGCAAGACGAAACAAAGTGGTTTGGTTGGCTATGTCTTCCATCGGGACTATACTATTTCTCAACACAAAGTTTCTTTTCTAGTTCAAGAGACGAGTGTCGGACGGGATACAACTGGAGCGACTCGTGACTCGTTGAGTCAGTTCGATAACCCATATGGAATTGCCCCGGATGAAGGCGTCAACCTCAAGGCTGCAAACTATATTTCTTCAACTCTAGCGCGATTCAAG

Protein sequence

MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHRDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK
Homology
BLAST of MC08g1204 vs. NCBI nr
Match: KAA0042928.1 (hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK05327.1 hypothetical protein E5676_scaffold108G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (336), Expect = 5.09e-38
Identity = 73/104 (70.19%), Postives = 83/104 (79.81%), Query Frame = 0

Query: 1   MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHRDY---TISQHKVSFLVQETS 60
           MEAN RK +GFMKGKLMP YKQY+GSKTKQ+GLVGYVFHR+      SQH ++ LVQ+  
Sbjct: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60

Query: 61  VGRDTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK 101
             RDTT ATR SLSQ D+ YGI  DEGV++KAANYISSTLARFK
Sbjct: 61  -SRDTT-ATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 102

BLAST of MC08g1204 vs. NCBI nr
Match: KAG6588895.1 (hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117 bits (294), Expect = 6.92e-32
Identity = 60/85 (70.59%), Postives = 67/85 (78.82%), Query Frame = 0

Query: 17  MPLYKQYSGSKTKQSGLVGYVFHRDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNP 76
           MP YKQY G+KTK +GLVGYVFHRDY IS H V+ LV E   G DT   TRDSL+QFDN 
Sbjct: 1   MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENP-GPDTA-VTRDSLTQFDNL 60

Query: 77  YGIAPDEGVNLKAANYISSTLARFK 101
           YGI  DEG+++KAANYISSTLARFK
Sbjct: 61  YGIVADEGIDVKAANYISSTLARFK 83

BLAST of MC08g1204 vs. NCBI nr
Match: KAE8650773.1 (hypothetical protein Csa_017653 [Cucumis sativus])

HSP 1 Score: 108 bits (270), Expect = 2.61e-28
Identity = 62/101 (61.39%), Postives = 68/101 (67.33%), Query Frame = 0

Query: 1   MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHRDYTISQHKVSFLVQETSVGR 60
           MEAN RK +GFM+GKLMP YKQY+GSKTKQ+GL                         GR
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGL----------------------DDPGR 60

Query: 61  DTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK 101
           DTT ATRDSLSQFD  YGI  DEGV++KAANYISSTLARFK
Sbjct: 61  DTT-ATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 78

BLAST of MC08g1204 vs. NCBI nr
Match: KAG7022660.1 (hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.7 bits (221), Expect = 1.08e-20
Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 0

Query: 17 MPLYKQYSGSKTKQSGLVGYVFHRDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNP 76
          MP YKQY G+KTK +GLVGYVFHRDY IS H V+ LV E   G DT   TRDSL+QFD+ 
Sbjct: 1  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENP-GPDTA-VTRDSLTQFDSL 60

Query: 77 YGIAPDEGVN 86
          YGI  DEG++
Sbjct: 61 YGIVADEGID 68

BLAST of MC08g1204 vs. NCBI nr
Match: XP_012070196.1 (uncharacterized protein LOC105632422 [Jatropha curcas] >KDP46265.1 hypothetical protein JCGZ_10105 [Jatropha curcas])

HSP 1 Score: 83.6 bits (205), Expect = 4.05e-18
Identity = 58/117 (49.57%), Postives = 70/117 (59.83%), Query Frame = 0

Query: 1   MEANSRKRKGFMKGKLMPLYK--------QYSGSKTKQS------GLVGYVFHRDYTIS- 60
           ME+N RKR+GFMKGKL+P Y+        QYS SK K S        VG+V H+DY I+ 
Sbjct: 1   MESN-RKRRGFMKGKLIPFYRSSKATSTVQYS-SKVKPSQSSPSAASVGFVVHQDYIITP 60

Query: 61  -QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK 101
            + KVSF+V      RD        LSQFD  YG+A DEGV++KAA YISS   RFK
Sbjct: 61  PKQKVSFIVPTADSNRDKY------LSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

BLAST of MC08g1204 vs. ExPASy TrEMBL
Match: A0A0A0LVE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 142 bits (357), Expect = 1.43e-41
Identity = 75/103 (72.82%), Postives = 86/103 (83.50%), Query Frame = 0

Query: 1   MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHRDY--TISQHKVSFLVQETSV 60
           MEAN RK +GFM+GKLMP YKQY+GSKTKQ+GLVGYVFHR+   ++SQH +  LVQ+   
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDP- 60

Query: 61  GRDTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK 101
           GRDTT ATRDSLSQFD  YGI  DEGV++KAANYISSTLARFK
Sbjct: 61  GRDTT-ATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 101

BLAST of MC08g1204 vs. ExPASy TrEMBL
Match: A0A5D3C0J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001540 PE=4 SV=1)

HSP 1 Score: 134 bits (336), Expect = 2.46e-38
Identity = 73/104 (70.19%), Postives = 83/104 (79.81%), Query Frame = 0

Query: 1   MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHRDY---TISQHKVSFLVQETS 60
           MEAN RK +GFMKGKLMP YKQY+GSKTKQ+GLVGYVFHR+      SQH ++ LVQ+  
Sbjct: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60

Query: 61  VGRDTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK 101
             RDTT ATR SLSQ D+ YGI  DEGV++KAANYISSTLARFK
Sbjct: 61  -SRDTT-ATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 102

BLAST of MC08g1204 vs. ExPASy TrEMBL
Match: A0A067LN74 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.96e-18
Identity = 58/117 (49.57%), Postives = 70/117 (59.83%), Query Frame = 0

Query: 1   MEANSRKRKGFMKGKLMPLYK--------QYSGSKTKQS------GLVGYVFHRDYTIS- 60
           ME+N RKR+GFMKGKL+P Y+        QYS SK K S        VG+V H+DY I+ 
Sbjct: 1   MESN-RKRRGFMKGKLIPFYRSSKATSTVQYS-SKVKPSQSSPSAASVGFVVHQDYIITP 60

Query: 61  -QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK 101
            + KVSF+V      RD        LSQFD  YG+A DEGV++KAA YISS   RFK
Sbjct: 61  PKQKVSFIVPTADSNRDKY------LSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

BLAST of MC08g1204 vs. ExPASy TrEMBL
Match: A0A6A6LUB7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.03e-17
Identity = 52/120 (43.33%), Postives = 70/120 (58.33%), Query Frame = 0

Query: 1   MEANSRKRKGFMKGKLMPLYK---------QYSGSK-------TKQSGLVGYVFHRDYTI 60
           ME+N RKR+GFMKGKLMP Y+         QY+ SK       +  +  VG+  H+DY I
Sbjct: 35  MESN-RKRRGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYII 94

Query: 61  S---QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK 101
           +   Q+KVSF++           + RD L+QFD  YG+  DE V++KAA+YISS   RFK
Sbjct: 95  APPKQNKVSFIIPPAP------DSNRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 147

BLAST of MC08g1204 vs. ExPASy TrEMBL
Match: A0A2C9U7Q7 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102100 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.90e-16
Identity = 52/119 (43.70%), Postives = 68/119 (57.14%), Query Frame = 0

Query: 1   MEANSRKRKGFMKGKLMPLYK---------QYSGSKTKQSGL------VGYVFHRDYTIS 60
           ME+N RKR+GFMKGKLMP Y+         QY+    K S        VG+  H+DY I+
Sbjct: 1   MESN-RKRRGFMKGKLMPFYRSPKSSSSNLQYTSKVIKPSQASPSAPSVGFYVHQDYIIA 60

Query: 61  ---QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVNLKAANYISSTLARFK 101
              Q+KVSF++     G       R+ L+QFD  YG+  DE V++KAA+YISS   RFK
Sbjct: 61  PPKQNKVSFIIAPPPDGN------RERLAQFDKVYGLPGDESVDIKAASYISSVQERFK 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0042928.15.09e-3870.19hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK0532... [more]
KAG6588895.16.92e-3270.59hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8650773.12.61e-2861.39hypothetical protein Csa_017653 [Cucumis sativus][more]
KAG7022660.11.08e-2064.29hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_012070196.14.05e-1849.57uncharacterized protein LOC105632422 [Jatropha curcas] >KDP46265.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
A0A0A0LVE71.43e-4172.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1[more]
A0A5D3C0J62.46e-3870.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A067LN741.96e-1849.57Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1[more]
A0A6A6LUB78.03e-1743.33Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1[more]
A0A2C9U7Q73.90e-1643.70Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102100 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36030:SF1SUBFAMILY NOT NAMEDcoord: 1..101
NoneNo IPR availablePANTHERPTHR36030FAMILY NOT NAMEDcoord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g1204.1MC08g1204.1mRNA