MC08g0880 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g0880
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING/U-box superfamily protein
Location	MC08: 7120971 .. 7122294 (-)
RNA-Seq Expression	MC08g0880
Synteny	MC08g0880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCCGATGAGAAGTTAGCAGAATCGTTACAACTCCAGGAAGCAATCGCATCCTCCGTATCGGCTTCAATTACAACACCGATTGTAAAATCGGAGAACGTGTCTTCGTCTTCGAGGAGAGTAATCCTAAAAGGCGAATCGTCGTCGTCGTCGTCTGGTTCCGAAACCTCCTTGTGCATAATCTGTACGGACACAAAATCCGCCGCGGAAATGTTCACAAGCAGCGCCTGTTCGCACTCGTTCTGCGCCGATTGCATCTCGAAACACATCGCCGCCAAGCTTGAGGACAACATAGCGGTGAAGTGCCCGGAGCCGAAGTGCGAATCGACGCTGGAGCCGTGGATGTGCGATTCGTTCGTTCCGAGAGAGGTACTGGAGCGGTGGGGGGATGCGCTGTGCGAGGCGATAATTCTAGGGATTCCGAGGATGTACTGTCCCTTCGTGGACTGCTCGGCGGCGATGATCGACGACGGAGGGGAGGCGGCGACGGTGACGGCGGCGGAATGTCCGAGCTGCAGGAGAATGTTCTGCGCGCAGTGCAAAGTTGGGTGGCATGGGGAAATGGAGTGCGACGAGTTTCAGAAATTGCGTAAGGAGGGAGGAGAATTGAGAGAGGATTTGATGGCGTTGCAGCTCGCCAACAGACAGAAATGGAAGAGATGTCCCCATTGCAAGATTTATGTGGAGAAGGTTGCTGGTTGCCTCCATATCACCTGCAGGTAATTTTATTGTTCCCCTCTTTTATTATCCTTTAAGAAAAATACTTGGCAGAGCAAATTCCTTATTACCGGTTTTAGTTATTCGATAACTCAATTGTTTTTTAGAAAAAAAATTTGTTTTTGTATTCCAATCTCTTAATTATTTTACTCATGGTAAAATTGAAGTTGTTCCTTGTAACGAGTCAGATATTTTCAATCTTTTGATCATCAACCATTACCTATACCAATTATAACTATAGCCGAATTGTTAGCATCTGAATCTTAAATTTATATTGTTTTCGAAGCCTATATGGTATAAAATTATAAATCTAGTGTATTAAATATATGTTTAGGAGTGATTTTTGCTCATTTAAATTGCTTTCAGTGGAGTTTAAAATCATTTAAATTGATTTTCAAAGTATTATTTAGATGGTAATTTTAGAAAATCAATTCTACTTAAATATCTTTTTTTTTTCTTTTTCAAAATTGTTCATTCTACCATCATTCTCAAGTACATCCTAAATTTCTTTTCGAAGTTTTTGTATAGGTGCGGAAATCAGTTTTGCTATAGCTGTGGAGCCAAGTGGGGTGGTAGCCATGCATGTCCACCTTCAGCTTATGAACGT

mRNA sequence

ATCTCCGATGAGAAGTTAGCAGAATCGTTACAACTCCAGGAAGCAATCGCATCCTCCGTATCGGCTTCAATTACAACACCGATTGTAAAATCGGAGAACGTGTCTTCGTCTTCGAGGAGAGTAATCCTAAAAGGCGAATCGTCGTCGTCGTCGTCTGGTTCCGAAACCTCCTTGTGCATAATCTGTACGGACACAAAATCCGCCGCGGAAATGTTCACAAGCAGCGCCTGTTCGCACTCGTTCTGCGCCGATTGCATCTCGAAACACATCGCCGCCAAGCTTGAGGACAACATAGCGGTGAAGTGCCCGGAGCCGAAGTGCGAATCGACGCTGGAGCCGTGGATGTGCGATTCGTTCGTTCCGAGAGAGGTACTGGAGCGGTGGGGGGATGCGCTGTGCGAGGCGATAATTCTAGGGATTCCGAGGATGTACTGTCCCTTCGTGGACTGCTCGGCGGCGATGATCGACGACGGAGGGGAGGCGGCGACGGTGACGGCGGCGGAATGTCCGAGCTGCAGGAGAATGTTCTGCGCGCAGTGCAAAGTTGGGTGGCATGGGGAAATGGAGTGCGACGAGTTTCAGAAATTGCGTAAGGAGGGAGGAGAATTGAGAGAGGATTTGATGGCGTTGCAGCTCGCCAACAGACAGAAATGGAAGAGATGTCCCCATTGCAAGATTTATGTGGAGAAGGTTGCTGGTTGCCTCCATATCACCTGCAGGTGCGGAAATCAGTTTTGCTATAGCTGTGGAGCCAAGTGGGGTGGTAGCCATGCATGTCCACCTTCAGCTTATGAACGT

Coding sequence (CDS)

ATCTCCGATGAGAAGTTAGCAGAATCGTTACAACTCCAGGAAGCAATCGCATCCTCCGTATCGGCTTCAATTACAACACCGATTGTAAAATCGGAGAACGTGTCTTCGTCTTCGAGGAGAGTAATCCTAAAAGGCGAATCGTCGTCGTCGTCGTCTGGTTCCGAAACCTCCTTGTGCATAATCTGTACGGACACAAAATCCGCCGCGGAAATGTTCACAAGCAGCGCCTGTTCGCACTCGTTCTGCGCCGATTGCATCTCGAAACACATCGCCGCCAAGCTTGAGGACAACATAGCGGTGAAGTGCCCGGAGCCGAAGTGCGAATCGACGCTGGAGCCGTGGATGTGCGATTCGTTCGTTCCGAGAGAGGTACTGGAGCGGTGGGGGGATGCGCTGTGCGAGGCGATAATTCTAGGGATTCCGAGGATGTACTGTCCCTTCGTGGACTGCTCGGCGGCGATGATCGACGACGGAGGGGAGGCGGCGACGGTGACGGCGGCGGAATGTCCGAGCTGCAGGAGAATGTTCTGCGCGCAGTGCAAAGTTGGGTGGCATGGGGAAATGGAGTGCGACGAGTTTCAGAAATTGCGTAAGGAGGGAGGAGAATTGAGAGAGGATTTGATGGCGTTGCAGCTCGCCAACAGACAGAAATGGAAGAGATGTCCCCATTGCAAGATTTATGTGGAGAAGGTTGCTGGTTGCCTCCATATCACCTGCAGGTGCGGAAATCAGTTTTGCTATAGCTGTGGAGCCAAGTGGGGTGGTAGCCATGCATGTCCACCTTCAGCTTATGAACGT

Protein sequence

ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFVPREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITCRCGNQFCYSCGAKWGGSHACPPSAYER

Homology

[Close]

BLAST of MC08g0880 vs. ExPASy Swiss-Prot
Match: P50876 (E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens OX=9606 GN=RNF144A PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 4.0e-17
Identity = 55/198 (27.78%), Postives = 91/198 (45.96%), Query Frame = 0


Query: 59  CIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNI--AVKCPEPKC--ESTLEPW 118
           C +C       +M T + C   FC  C+ +++   +++ +  A+ CP+  C  +  L+  
Sbjct: 20  CKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQEN 79

Query: 119 MCDSFVPREVLERWGDALCEAIILGIP-RMYCPFVDCSA-AMIDDGGEAATVTAAECPSC 178
             +  V  E+++R+     E  +L  P R +CP   C A   + D G   T    +C +C
Sbjct: 80  EIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVG-LQTPQPVQCKAC 139

Query: 179 RRMFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVA 238
           R  FC+ CK  WH    C E   +    GE        +  +    KRCP CK+Y+E+  
Sbjct: 140 RMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEE--DDAPIKRCPKCKVYIERDE 199

Query: 239 GCLHITCR-CGNQFCYSC 250
           GC  + C+ C + FC+ C
Sbjct: 200 GCAQMMCKNCKHAFCWYC 214

[Close]

BLAST of MC08g0880 vs. ExPASy Swiss-Prot
Match: Q8BKD6 (E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 GN=Rnf144b PE=2 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 5.3e-17
Identity = 54/197 (27.41%), Postives = 83/197 (42.13%), Query Frame = 0


Query: 59  CIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIA--VKCPEPKC--ESTLEPW 118
           C +C   +S  +M     C   FC  C+ +++   + +     + CP+  C    TL+  
Sbjct: 30  CKLCLCEQSLDKMTMLQECQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTLQET 89

Query: 119 MCDSFVPREVLERWGDALCEAIILGIP-RMYCPFVDCSAAMIDDGGEAATVTAAECPSCR 178
                VP +  + +     E  +   P R +CP  DC        G+       ECPSC 
Sbjct: 90  EIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVLVECPSCH 149

Query: 179 RMFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAG 238
             FC+ CK  WH E  C + Q    E G L        +      K+CP C+IY+E+  G
Sbjct: 150 LKFCSCCKDAWHEESSCRDSQSAMPEHGALFGTDADAPI------KQCPVCRIYIERNEG 209

Query: 239 CLHITCR-CGNQFCYSC 250
           C  + C+ C + FC+ C
Sbjct: 210 CAQMMCKNCKHTFCWYC 220

[Close]

BLAST of MC08g0880 vs. ExPASy Swiss-Prot
Match: Q9SKC4 (Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana OX=3702 GN=ARI10 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.9e-17
Identity = 64/215 (29.77%), Postives = 106/215 (49.30%), Query Frame = 0


Query: 52  SGSETSL-CIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDN---IAVKCPEPKC 111
           +G+E  + C IC ++ +  E+  S +C H +C  C + +I  K+ED    + VKCPEP C
Sbjct: 113 NGTEVDIQCGICFESYTRKEI-ASVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSC 172

Query: 112 ESTLEPWMCDSFVPREVLERWGDALCEAIILGIPRM-YCPFVDCSAAMIDDGGEAATVTA 171
            + +   M D    ++  +++      + +    +M +CP   C  A+  + GE++    
Sbjct: 173 YAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAV--EFGESSGYDV 232

Query: 172 AECPSCRRMFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKI 231
           A C  C   FC  C    H  ++C+   K   +  +  E+   + LAN    K CP CK 
Sbjct: 233 A-C-LCSYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWI-LANS---KPCPKCKR 292

Query: 232 YVEKVAGCLHITC--RCGNQFCYSCGAKWGGSHAC 260
            +EK  GC H+TC   CG++FC+ CG  +   +AC
Sbjct: 293 PIEKSHGCNHMTCSASCGHRFCWICGKSYSDHYAC 318

[Close]

BLAST of MC08g0880 vs. ExPASy Swiss-Prot
Match: Q9SKC3 (Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana OX=3702 GN=ARI9 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16
Identity = 60/197 (30.46%), Postives = 93/197 (47.21%), Query Frame = 0


Query: 59  CIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDN---IAVKCPEPKCESTLEPWM 118
           C IC ++ +  E+   S C H +C  C + +I  K+ED    + VKCPEP C + +   M
Sbjct: 128 CGICFESYTREEIARVS-CGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDM 187

Query: 119 CDSFVPREVLERWGDALCEAIIL-GIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRR 178
            +     +V E++   +  + +  G    +CP   C  A ++ GG  ++     C  C  
Sbjct: 188 IEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYA-VEFGGSESSSYDVSC-LCSY 247

Query: 179 MFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGC 238
            FC  C    H  ++CD   K   +  +  E+     LAN    K CP CK  +EK  GC
Sbjct: 248 RFCWNCSEDAHSPVDCDTVSKWIFKNQDESEN-KNWMLANS---KPCPECKRPIEKNDGC 307

Query: 239 LHITCR--CGNQFCYSC 250
            H+TC   CG++FC+ C
Sbjct: 308 NHMTCSAPCGHEFCWIC 317

[Close]

BLAST of MC08g0880 vs. ExPASy Swiss-Prot
Match: Q6T486 (Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium discoideum OX=44689 GN=rbrA PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.4e-16
Identity = 57/217 (26.27%), Postives = 97/217 (44.70%), Query Frame = 0


Query: 59  CIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDN---IAVKCPEPKCESTLEPWM 118
           C+IC +     + F +  C+H +C  C   ++  K+ +    I   CP PKC+  +    
Sbjct: 139 CLICLEDYPPTQTF-ALICNHRYCLPCYKNYLEIKVSEGPECIYTPCPAPKCKVIVHQDA 198

Query: 119 CDSFVPREVLERWGDALCEAIILGIPRM-YCPFVDCSAAMIDDGGEAATVTAAECPSCRR 178
               V  EV ER+ + + ++ +   P++ +CP   C  ++  D  E       +C     
Sbjct: 199 FKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIYSIRCDRKERKEAVNCKCGFQYC 258

Query: 179 MFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGC 238
             C   ++G H    C +  K  ++  +  E+ +   LAN    K+CP C+  +EK  GC
Sbjct: 259 FNCNDYEIGDHMPCPCSQVDKWLQKASDESEN-VTWMLANT---KKCPECRSPIEKNGGC 318

Query: 239 LHITCR-----CGNQFCYSCGAKW-------GGSHAC 260
           +H+TCR     CG +FC+ C   W       GG + C
Sbjct: 319 MHMTCRKNAGGCGFEFCWLCRGPWTEHGSTTGGYYNC 350

[Close]

BLAST of MC08g0880 vs. NCBI nr
Match: XP_022152679.1 (E3 ubiquitin-protein ligase RNF144A-like [Momordica charantia])

HSP 1 Score: 480 bits (1236), Expect = 1.70e-169
Identity = 246/262 (93.89%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 60
           ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI
Sbjct: 29  ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 88

Query: 61  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 120
           ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV
Sbjct: 89  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 148

Query: 121 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 180
           PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC
Sbjct: 149 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 208

Query: 181 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITCR 240
           KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITC 
Sbjct: 209 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITC- 268

Query: 241 CGNQFCYSCGAKWGGSHACPPS 262
               FC   GA+   + A  PS
Sbjct: 269 ---SFCI--GAEISFAIAVEPS 284

[Close]

BLAST of MC08g0880 vs. NCBI nr
Match: XP_022956145.1 (probable E3 ubiquitin-protein ligase ARI10 [Cucurbita moschata])

HSP 1 Score: 344 bits (882), Expect = 5.48e-116
Identity = 170/266 (63.91%), Postives = 202/266 (75.94%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 60
           ISDE  AE LQLQE+IASS+    T+ I+ +            K   +  SSGS T+LC 
Sbjct: 32  ISDEIFAEELQLQESIASSL---FTSTIMSN------------KPSPNPESSGS-TTLCT 91

Query: 61  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 120
           ICTDTKSA+EMFTS+ CSH+FCADCISKHIAAKLED++AVKCPEPKC + LEP MCDSFV
Sbjct: 92  ICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFV 151

Query: 121 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 180
           P+EVLERWGDAL +A++L    +YCPF DCSA M+D+      + A ECP C RMFCA+C
Sbjct: 152 PKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDE----EDMEAVECPKCWRMFCAKC 211

Query: 181 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITCR 240
            VGWHG+M C EFQ+L K GG  RE+ M ++LA+ +KWKRCPHCKI VEK+ GCLHITCR
Sbjct: 212 GVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGCLHITCR 271

Query: 241 CGNQFCYSCGAKWGGSHACPPSAYER 266
           CG++FCY CGAKW G HACPPSAYER
Sbjct: 272 CGSEFCYCCGAKWNGHHACPPSAYER 277

[Close]

BLAST of MC08g0880 vs. NCBI nr
Match: XP_022980686.1 (probable E3 ubiquitin-protein ligase ARI5 [Cucurbita maxima])

HSP 1 Score: 336 bits (861), Expect = 8.24e-113
Identity = 165/266 (62.03%), Postives = 197/266 (74.06%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 60
           ISDE  AE LQLQE+IASS +++I +                 K   +  SSGS+T LC 
Sbjct: 32  ISDEIFAEELQLQESIASSFTSTIMSN----------------KPSPNPESSGSKT-LCT 91

Query: 61  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 120
           ICTDTKSA+EMFTS+ CSH+FCADCISKHIAAKL D++AVKCPEPKC + L+P MCDSFV
Sbjct: 92  ICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLVDSLAVKCPEPKCAAVLKPEMCDSFV 151

Query: 121 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 180
           P+EVLERWGDAL +A++L    +YCPF DCSA M+D+    A     ECP C RMFCA+C
Sbjct: 152 PKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDREAV----ECPKCWRMFCAKC 211

Query: 181 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITCR 240
            VGWH +M C EFQ+L K GG  RE+ M ++LA+ +KWKRCPHCKI VEK+ GCLHITCR
Sbjct: 212 GVGWHADMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKILGCLHITCR 271

Query: 241 CGNQFCYSCGAKWGGSHACPPSAYER 266
           CG++FCYSCG KW   HACPPSAYER
Sbjct: 272 CGSEFCYSCGGKWNDRHACPPSAYER 276

[Close]

BLAST of MC08g0880 vs. NCBI nr
Match: XP_023527456.1 (probable E3 ubiquitin-protein ligase rbrA [Cucurbita pepo subsp. pepo] >XP_023527457.1 probable E3 ubiquitin-protein ligase rbrA [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (839), Expect = 2.72e-110
Identity = 150/216 (69.44%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 51  SSGSETSLCIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCEST 110
           SSGSET LC ICT TKSA+EMFTS+ CSH+FCADCISKHIAA+LED++AVKCPEPKC + 
Sbjct: 11  SSGSET-LCTICTGTKSASEMFTSTGCSHTFCADCISKHIAARLEDSMAVKCPEPKCAAV 70

Query: 111 LEPWMCDSFVPREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECP 170
           LEP MCDSFVP+EVLERWGDAL +A++L    +YCPF DC A M+D     A     ECP
Sbjct: 71  LEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCLAGMVDKEDREAV----ECP 130

Query: 171 SCRRMFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEK 230
            C RMFCA+C VGWHG+M C EFQ+L K GG  RE++M ++LA+ +KWKRCPHCKI VEK
Sbjct: 131 KCWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEVMTMKLADERKWKRCPHCKILVEK 190

Query: 231 VAGCLHITCRCGNQFCYSCGAKWGGSHACPPSAYER 266
           + GCLHITCRCG++FCYSCGAKW G HACPP AYER
Sbjct: 191 IEGCLHITCRCGSEFCYSCGAKWNGHHACPPPAYER 221

[Close]

BLAST of MC08g0880 vs. NCBI nr
Match: XP_038889081.1 (probable E3 ubiquitin-protein ligase RNF144A-A [Benincasa hispida])

HSP 1 Score: 324 bits (831), Expect = 2.30e-107
Identity = 161/266 (60.53%), Postives = 194/266 (72.93%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 60
           +SDE  A  LQLQEAI SS+S+   TP     N               +SS   + S+C 
Sbjct: 21  LSDENFAYELQLQEAITSSLSS---TPAEIPNN---------------NSSPKPQDSICT 80

Query: 61  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 120
           ICTD K A+EMFT+  CSH+FC DCISK+IAAKLED++AVKCP+PKC + LEP MC SF+
Sbjct: 81  ICTDAKLASEMFTNGLCSHTFCTDCISKYIAAKLEDSMAVKCPQPKCGTLLEPEMCRSFI 140

Query: 121 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 180
           P+EVLERWGDAL EA+IL   R+ CPF DCSA MI +G E   VTA EC +C R+FCAQC
Sbjct: 141 PKEVLERWGDALFEAMILKWKRLNCPFKDCSAPMIYEGDEKG-VTAVECLNCWRLFCAQC 200

Query: 181 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITCR 240
           KVGWHG+MEC EF+K+RKE  E   D+M ++LA+ +KWK+CP+CK+YVEK  GC+HI CR
Sbjct: 201 KVGWHGDMECREFEKVRKENTE---DMMTMKLADEKKWKKCPNCKVYVEKTVGCVHIICR 260

Query: 241 CGNQFCYSCGAKWGGSHACPPSAYER 266
           CG QFCYSCGAKWGG HACP SAYE 
Sbjct: 261 CGTQFCYSCGAKWGGGHACPNSAYEH 264

[Close]

BLAST of MC08g0880 vs. ExPASy TrEMBL
Match: A0A6J1DGR7 (E3 ubiquitin-protein ligase RNF144A-like OS=Momordica charantia OX=3673 GN=LOC111020341 PE=3 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 8.25e-170
Identity = 246/262 (93.89%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 60
           ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI
Sbjct: 29  ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 88

Query: 61  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 120
           ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV
Sbjct: 89  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 148

Query: 121 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 180
           PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC
Sbjct: 149 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 208

Query: 181 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITCR 240
           KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITC 
Sbjct: 209 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITC- 268

Query: 241 CGNQFCYSCGAKWGGSHACPPS 262
               FC   GA+   + A  PS
Sbjct: 269 ---SFCI--GAEISFAIAVEPS 284

[Close]

BLAST of MC08g0880 vs. ExPASy TrEMBL
Match: A0A6J1GX07 (probable E3 ubiquitin-protein ligase ARI10 OS=Cucurbita moschata OX=3662 GN=LOC111457924 PE=3 SV=1)

HSP 1 Score: 344 bits (882), Expect = 2.65e-116
Identity = 170/266 (63.91%), Postives = 202/266 (75.94%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 60
           ISDE  AE LQLQE+IASS+    T+ I+ +            K   +  SSGS T+LC 
Sbjct: 32  ISDEIFAEELQLQESIASSL---FTSTIMSN------------KPSPNPESSGS-TTLCT 91

Query: 61  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 120
           ICTDTKSA+EMFTS+ CSH+FCADCISKHIAAKLED++AVKCPEPKC + LEP MCDSFV
Sbjct: 92  ICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFV 151

Query: 121 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 180
           P+EVLERWGDAL +A++L    +YCPF DCSA M+D+      + A ECP C RMFCA+C
Sbjct: 152 PKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDE----EDMEAVECPKCWRMFCAKC 211

Query: 181 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITCR 240
            VGWHG+M C EFQ+L K GG  RE+ M ++LA+ +KWKRCPHCKI VEK+ GCLHITCR
Sbjct: 212 GVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGCLHITCR 271

Query: 241 CGNQFCYSCGAKWGGSHACPPSAYER 266
           CG++FCY CGAKW G HACPPSAYER
Sbjct: 272 CGSEFCYCCGAKWNGHHACPPSAYER 277

[Close]

BLAST of MC08g0880 vs. ExPASy TrEMBL
Match: A0A6J1IU95 (probable E3 ubiquitin-protein ligase ARI5 OS=Cucurbita maxima OX=3661 GN=LOC111479983 PE=3 SV=1)

HSP 1 Score: 336 bits (861), Expect = 3.99e-113
Identity = 165/266 (62.03%), Postives = 197/266 (74.06%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSVSASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLCI 60
           ISDE  AE LQLQE+IASS +++I +                 K   +  SSGS+T LC 
Sbjct: 32  ISDEIFAEELQLQESIASSFTSTIMSN----------------KPSPNPESSGSKT-LCT 91

Query: 61  ICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSFV 120
           ICTDTKSA+EMFTS+ CSH+FCADCISKHIAAKL D++AVKCPEPKC + L+P MCDSFV
Sbjct: 92  ICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLVDSLAVKCPEPKCAAVLKPEMCDSFV 151

Query: 121 PREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQC 180
           P+EVLERWGDAL +A++L    +YCPF DCSA M+D+    A     ECP C RMFCA+C
Sbjct: 152 PKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDREAV----ECPKCWRMFCAKC 211

Query: 181 KVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLHITCR 240
            VGWH +M C EFQ+L K GG  RE+ M ++LA+ +KWKRCPHCKI VEK+ GCLHITCR
Sbjct: 212 GVGWHADMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKILGCLHITCR 271

Query: 241 CGNQFCYSCGAKWGGSHACPPSAYER 266
           CG++FCYSCG KW   HACPPSAYER
Sbjct: 272 CGSEFCYSCGGKWNDRHACPPSAYER 276

[Close]

BLAST of MC08g0880 vs. ExPASy TrEMBL
Match: A0A5A7UED3 (E3 ubiquitin-protein ligase RNF144B-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00700 PE=3 SV=1)

HSP 1 Score: 321 bits (823), Expect = 1.57e-107
Identity = 161/269 (59.85%), Postives = 191/269 (71.00%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSV-SASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLC 60
           +SDE  AE LQLQE I SS+ S  I  PI  S    SS+ +V                LC
Sbjct: 13  LSDENYAEELQLQEVITSSLLSPPIKIPIHPSPTPHSSTSQV----------------LC 72

Query: 61  IICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSF 120
            ICTD KS ++MFT+  C+H+FC DCISKHIAAKLE  +AVKCPEP C + LEP MC SF
Sbjct: 73  SICTDAKSHSQMFTNRVCTHTFCTDCISKHIAAKLEVTMAVKCPEPNCGTVLEPEMCGSF 132

Query: 121 VPREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQ 180
           VP+ VLERW DAL EA+IL   R+ CPF DC AAMID+G E   VTA EC SC R+FCA+
Sbjct: 133 VPKRVLERWADALFEAMILKSKRLNCPFKDCGAAMIDEGDEEG-VTAVECGSCWRLFCAE 192

Query: 181 CKVGWHGEMECDEFQKLRKEGGEL--REDLMALQLANRQKWKRCPHCKIYVEKVAGCLHI 240
           C+VGWHGEM+C EFQ+LRKE G    ++D M ++LA  +KW+RCPHCKIYVEK  GC+HI
Sbjct: 193 CRVGWHGEMKCGEFQRLRKEAGVSGDKDDAMTVKLAENKKWRRCPHCKIYVEKTVGCVHI 252

Query: 241 TCRCGNQFCYSCGAKWGGSHACPPSAYER 266
            CRCG++FCYSCG KWGG+HAC  SAYER
Sbjct: 253 LCRCGSEFCYSCGGKWGGAHACRGSAYER 264

[Close]

BLAST of MC08g0880 vs. ExPASy TrEMBL
Match: A0A1S3CDI0 (E3 ubiquitin-protein ligase RNF144B-like OS=Cucumis melo OX=3656 GN=LOC103499194 PE=3 SV=1)

HSP 1 Score: 321 bits (823), Expect = 1.57e-107
Identity = 161/269 (59.85%), Postives = 191/269 (71.00%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSV-SASITTPIVKSENVSSSSRRVILKGESSSSSSGSETSLC 60
           +SDE  AE LQLQE I SS+ S  I  PI  S    SS+ +V                LC
Sbjct: 13  LSDENYAEELQLQEVITSSLLSPPIKIPIHPSPTPHSSTSQV----------------LC 72

Query: 61  IICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDSF 120
            ICTD KS ++MFT+  C+H+FC DCISKHIAAKLE  +AVKCPEP C + LEP MC SF
Sbjct: 73  SICTDAKSHSQMFTNRVCTHTFCTDCISKHIAAKLEVTMAVKCPEPNCGTVLEPEMCGSF 132

Query: 121 VPREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRRMFCAQ 180
           VP+ VLERW DAL EA+IL   R+ CPF DC AAMID+G E   VTA EC SC R+FCA+
Sbjct: 133 VPKRVLERWADALFEAMILKSKRLNCPFKDCGAAMIDEGDEEG-VTAVECGSCWRLFCAE 192

Query: 181 CKVGWHGEMECDEFQKLRKEGGEL--REDLMALQLANRQKWKRCPHCKIYVEKVAGCLHI 240
           C+VGWHGEM+C EFQ+LRKE G    ++D M ++LA  +KW+RCPHCKIYVEK  GC+HI
Sbjct: 193 CRVGWHGEMKCGEFQRLRKEAGVSGDKDDAMTVKLAENKKWRRCPHCKIYVEKTVGCVHI 252

Query: 241 TCRCGNQFCYSCGAKWGGSHACPPSAYER 266
            CRCG++FCYSCG KWGG+HAC  SAYER
Sbjct: 253 LCRCGSEFCYSCGGKWGGAHACRGSAYER 264

[Close]

BLAST of MC08g0880 vs. TAIR 10
Match: AT3G14250.1 (RING/U-box superfamily protein )

HSP 1 Score: 226.5 bits (576), Expect = 2.6e-59
Identity = 110/267 (41.20%), Postives = 161/267 (60.30%), Query Frame = 0


Query: 1   ISDEKLAESLQLQEAIASSVSASIT----TPIVKSENVSSSSRRVILKGESSSSSSGSET 60
           I+DE  A  + LQEA+ SS  AS       P V    V+   +   +K E+         
Sbjct: 35  IADESYATEIHLQEAMFSSFGASTVGVNHHPQVHRNLVTLVKQEPEIKAENEPMEPSRR- 94

Query: 61  SLCIICTDTKSAAEMFTSSA-CSHSFCADCISKHIAAKLEDNIA-VKCPEPKCESTLEPW 120
            LC+IC D K ++++F  +  C+H++C DC  +++A K+++N + +KCP+ +C   +EP+
Sbjct: 95  -LCMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIKCPDVECTRLIEPY 154

Query: 121 MCDSFVPREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAECPSCRR 180
            C   +P++V +RW   LCE++I    + YCPF DCSA M+++    A VT  EC SC R
Sbjct: 155 TCRDLIPKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNENGDANVTQTECRSCHR 214

Query: 181 MFCAQCKVGWHGEMECDEFQKL--RKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVA 240
           +FC QCKV WH  + CDEFQ+    K+     +D + +Q+A  ++W+RCP CK YV+KV 
Sbjct: 215 LFCVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWRRCPSCKFYVDKVE 274

Query: 241 GCLHITCRCGNQFCYSCGAKWGGSHAC 260
           GC HI CRCG QFCY CG+ W  SHAC
Sbjct: 275 GCQHIKCRCGYQFCYGCGSVWSSSHAC 299

[Close]

BLAST of MC08g0880 vs. TAIR 10
Match: AT3G53690.1 (RING/U-box superfamily protein )

HSP 1 Score: 218.4 bits (555), Expect = 7.0e-57
Identity = 104/209 (49.76%), Postives = 138/209 (66.03%), Query Frame = 0


Query: 44  KGESSSSSSGSETSLCIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNI-AVKC 103
           KG+SSSS +   T  C IC D+KS  E F    CSH +C DC+SK+IAAKL+DNI +++C
Sbjct: 102 KGQSSSSKTA--TFDCEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIEC 161

Query: 104 PEPKCESTLEPWMCDSFVPREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAA 163
           P   C   LEP  C   +P+EV +RWGDALCEA+++   + YCP+ DCSA +  +  E  
Sbjct: 162 PVSGCSGRLEPDQCRQILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEESE-V 221

Query: 164 TVTAAECPSCRRMFCAQCKVGWHGEMECDEFQKL-RKEGGELREDLMALQLANRQKWKRC 223
            +  +ECP C RM C +C   WH EM C+EFQKL   E G  R+D++   +A ++KWKRC
Sbjct: 222 KMKDSECPHCHRMVCVECGTQWHPEMTCEEFQKLAANERG--RDDILLATMAKQKKWKRC 281

Query: 224 PHCKIYVEKVAGCLHITCRCGNQFCYSCG 251
           P CK Y+EK  GCL++ CRCG  FCY+CG
Sbjct: 282 PSCKFYIEKSQGCLYMKCRCGLAFCYNCG 305

[Close]

BLAST of MC08g0880 vs. TAIR 10
Match: AT5G37560.1 (RING/U-box superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-36
Identity = 71/201 (35.32%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 59  CIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDS 118
           C IC+D   A  M  +  C H  C  C+ + +  KL   I   C E  C+S L    C  
Sbjct: 181 CSICSDKTDAEHMLLNDKCLHRHCFSCVKQQVKVKLRSGIVPPCLEDGCKSELTLESCSM 240

Query: 119 FVPREVLERWGDALCEAIILGIPRMYCPFVDCSAAM--IDDGGEAATVTAAECPSCRRMF 178
            +  +++E W   + E +I    ++YCP+  CS  M   +   EA       C  C  +F
Sbjct: 241 VLTPKLIEMWKRKMEEDLIPDAEKIYCPYRSCSMLMSKTELSREAEQSNVRACIKCSELF 300

Query: 179 CAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVAGCLH 238
           C  CKV WH ++ C +++++  E   L  D+M   LAN Q W++C  CK  +E   GC H
Sbjct: 301 CIDCKVPWHSDLSCADYKRIHSE--RLVNDMMLKVLANDQMWRQCSECKHMIELTEGCNH 360

Query: 239 ITCRCGNQFCYSCGAKWGGSH 258
           ITCRCG +FCY CG KW   H
Sbjct: 361 ITCRCGYEFCYRCGHKWTKYH 379

[Close]

BLAST of MC08g0880 vs. TAIR 10
Match: AT5G60250.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 149.1 bits (375), Expect = 5.2e-36
Identity = 74/204 (36.27%), Postives = 104/204 (50.98%), Query Frame = 0


Query: 59  CIICTDTKSAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCDS 118
           C IC +   A  MF+   C H FC  C+ +H+  KL   +A KCP   C+S L    C  
Sbjct: 301 CAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLLHGMAPKCPHDGCKSELVIDACGK 360

Query: 119 FVPREVLERWGDALCEAIILGIPRMYCPFVDCSAAM----IDDGGEAATVT-----AAEC 178
            +  ++ + W   L E  I    R+YCP+  CSA M    I +  ++            C
Sbjct: 361 LLTPKLSKLWQQRLQENAIPVTERVYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRRC 420

Query: 179 PSCRRMFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVE 238
             CR +FC  CKV WHG + C E++KL  E     +D+    LAN + W++C  C+  +E
Sbjct: 421 VECRGLFCVDCKVPWHGNLSCTEYKKLHPE--PPADDVKLKSLANNKMWRQCGKCQHMIE 480

Query: 239 KVAGCLHITCRCGNQFCYSCGAKW 254
              GC HITCRCG++FCY+CG  W
Sbjct: 481 LSQGCNHITCRCGHEFCYNCGGGW 502

[Close]

BLAST of MC08g0880 vs. TAIR 10
Match: AT3G45540.1 (RING/U-box protein with C6HC-type zinc finger )

HSP 1 Score: 142.5 bits (358), Expect = 4.9e-34
Identity = 72/212 (33.96%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 59  CIICTDTK-SAAEMFTSSACSHSFCADCISKHIAAKLEDNIAVKCPEPKCESTLEPWMCD 118
           C IC D   +  +MF    C H FC+DC+ +HI  +L +   ++CP  +C++TL+   C 
Sbjct: 100 CKICLDDDINENQMFCVGKCRHRFCSDCMRRHIEVRLLEGSVMRCPHYRCKTTLKFGGCI 159

Query: 119 SFVPREVLERWGDALCEAIILGIPRMYCPFVDCSAAMIDDGGEAATVTAAE-----CPSC 178
           + +  ++ E W   + E +I    R+YCP   CSA M +   E +  T  +     C  C
Sbjct: 160 NLLTPKIREMWQQRIKEDLIPVTGRIYCPNSRCSALMSET--ELSISTKEDEVRRCCFKC 219

Query: 179 RRMFCAQCKVGWHGEMECDEFQKLRKEGGELREDLMALQLANRQKWKRCPHCKIYVEKVA 238
            ++FC +CKV WH  + C++++KL     E   D     LAN+++W++C  C+  +E   
Sbjct: 220 GQIFCIKCKVSWHSNLSCNDYKKLNPYPTE--NDGKIKALANQKRWRQCGKCQHMIELSK 279

Query: 239 GCLHITCRCGNQFCYSCGAKWGG---SHACPP 262
           GC+ + CRCG++FCY CG + GG    H  PP
Sbjct: 280 GCVQVKCRCGHKFCYRCGVQAGGCKHGHGLPP 307

The following BLAST results are available for this feature:

BLAST of MC08g0880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50876	4.0e-17	27.78	E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens OX=9606 GN=RNF144A PE=1 SV=2	[more]
Q8BKD6	5.3e-17	27.41	E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 GN=Rnf144b PE=2 SV=...	[more]
Q9SKC4	6.9e-17	29.77	Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana OX=3702 GN=AR...	[more]
Q9SKC3	1.5e-16	30.46	Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana OX=3702 GN=ARI...	[more]
Q6T486	3.4e-16	26.27	Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of MC08g0880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152679.1	1.70e-169	93.89	E3 ubiquitin-protein ligase RNF144A-like [Momordica charantia]	[more]
XP_022956145.1	5.48e-116	63.91	probable E3 ubiquitin-protein ligase ARI10 [Cucurbita moschata]	[more]
XP_022980686.1	8.24e-113	62.03	probable E3 ubiquitin-protein ligase ARI5 [Cucurbita maxima]	[more]
XP_023527456.1	2.72e-110	69.44	probable E3 ubiquitin-protein ligase rbrA [Cucurbita pepo subsp. pepo] >XP_02352...	[more]
XP_038889081.1	2.30e-107	60.53	probable E3 ubiquitin-protein ligase RNF144A-A [Benincasa hispida]	[more]

BLAST of MC08g0880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGR7	8.25e-170	93.89	E3 ubiquitin-protein ligase RNF144A-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1GX07	2.65e-116	63.91	probable E3 ubiquitin-protein ligase ARI10 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IU95	3.99e-113	62.03	probable E3 ubiquitin-protein ligase ARI5 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A5A7UED3	1.57e-107	59.85	E3 ubiquitin-protein ligase RNF144B-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CDI0	1.57e-107	59.85	E3 ubiquitin-protein ligase RNF144B-like OS=Cucumis melo OX=3656 GN=LOC103499194...	[more]

BLAST of MC08g0880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14250.1	2.6e-59	41.20	RING/U-box superfamily protein	[more]
AT3G53690.1	7.0e-57	49.76	RING/U-box superfamily protein	[more]
AT5G37560.1	1.8e-36	35.32	RING/U-box superfamily protein	[more]
AT5G60250.1	5.2e-36	36.27	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G45540.1	4.9e-34	33.96	RING/U-box protein with C6HC-type zinc finger	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002867	IBR domain	SMART	SM00647	ibrneu5	coord: 202..259 e-value: 0.005 score: 26.1 coord: 126..190 e-value: 1.5E-13 score: 61.1
IPR002867	IBR domain	PFAM	PF01485	IBR	coord: 142..190 e-value: 3.4E-11 score: 43.2 coord: 211..259 e-value: 5.6E-8 score: 32.9
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 59..104 e-value: 3.6E-5 score: 23.5
None	No IPR available	GENE3D	2.20.25.20		coord: 143..191 e-value: 4.2E-5 score: 25.6
None	No IPR available	GENE3D	1.20.120.1750		coord: 192..266 e-value: 2.3E-16 score: 62.4
None	No IPR available	PANTHER	PTHR11685:SF313	RBR-TYPE E3 UBIQUITIN TRANSFERASE	coord: 2..261
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 132..195
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 54..135
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 203..259
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 52..137 e-value: 4.4E-20 score: 73.4
IPR031127	E3 ubiquitin ligase RBR family	PANTHER	PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	coord: 2..261
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 77..86
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 59..106 score: 10.291081
IPR044066	TRIAD supradomain	PROSITE	PS51873	TRIAD	coord: 55..266 score: 26.505327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g0880.1	MC08g0880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity