MC08g0579 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0579
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 4677828 .. 4678109 (-)
RNA-Seq ExpressionMC08g0579
SyntenyMC08g0579
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTTGCCAATTTGGGGTGGGATTTCCCCAGAGAACGAGTTGTCGCTCAAATTTAGCAGAGACAAGCCCTGCAGATTAGAAATCGTGGTGGGTATATTCCCATATAGACGATTCTCTCCCATGTACAGCTTAGAAAGATCCTTGGAGAGATTCCCAATGGAATCTGGAATCACACCCTCGAAACTGTTCCCATCAATAGCTAGAAAGGCAAGGCGAGAGCTGTTCGTCAAGGAAGTGATGAAATCGAGACCCCCATTTGCATCTGAACCCACAAACTTGTTG

mRNA sequence

AACTTGCCAATTTGGGGTGGGATTTCCCCAGAGAACGAGTTGTCGCTCAAATTTAGCAGAGACAAGCCCTGCAGATTAGAAATCGTGGTGGGTATATTCCCATATAGACGATTCTCTCCCATGTACAGCTTAGAAAGATCCTTGGAGAGATTCCCAATGGAATCTGGAATCACACCCTCGAAACTGTTCCCATCAATAGCTAGAAAGGCAAGGCGAGAGCTGTTCGTCAAGGAAGTGATGAAATCGAGACCCCCATTTGCATCTGAACCCACAAACTTGTTG

Coding sequence (CDS)

AACTTGCCAATTTGGGGTGGGATTTCCCCAGAGAACGAGTTGTCGCTCAAATTTAGCAGAGACAAGCCCTGCAGATTAGAAATCGTGGTGGGTATATTCCCATATAGACGATTCTCTCCCATGTACAGCTTAGAAAGATCCTTGGAGAGATTCCCAATGGAATCTGGAATCACACCCTCGAAACTGTTCCCATCAATAGCTAGAAAGGCAAGGCGAGAGCTGTTCGTCAAGGAAGTGATGAAATCGAGACCCCCATTTGCATCTGAACCCACAAACTTGTTG

Protein sequence

NLPIWGGISPENELSLKFSRDKPCRLEIVVGIFPYRRFSPMYSLERSLERFPMESGITPSKLFPSIARKARRELFVKEVMKSRPPFASEPTNLL
Homology
[Close]
BLAST of MC08g0579 vs. NCBI nr
Match: KAF9681636.1 (hypothetical protein SADUNF_Sadunf05G0022500 [Salix dunnii])

HSP 1 Score: 55.8 bits (133), Expect = 1.38e-06
Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 0 

Query: 19 SRDKPCRLEIVVGIFPYRRFSPMYSLERSLERFPMESGITPSKLFPSIARK 69
          S  K  R  I  GI PY  F P Y L R  ERFPM+SG+ PS+  PS+ARK
Sbjct: 19 SNAKLLRCPIEAGILPYILFPPKYKLRREFERFPMDSGMGPSRRLPSMARK 69

[Close]
BLAST of MC08g0579 vs. NCBI nr
Match: XP_019096302.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC109130756 [Camelina sativa])

HSP 1 Score: 47.8 bits (112), Expect = 1.97e-04
Identity = 27/69 (39.13%), Postives = 36/69 (52.17%), Query Frame = 0 

Query: 4  IWGGISPENELSLKFSRDKPCRLEIVVGIFPYRRFSPMYSLERSLERFPMESGITPSKLF 63
          I GG +P N L      D P +    +G FP     P  +   SL RFP+E GI+P++LF
Sbjct: 28 ILGGSAPLNXLLESNKPDNPVKFRSTIGKFPLSLL-PSTNNVVSLFRFPIEDGISPTRLF 87

Query: 64 PSIARKARR 72
          P   RK +R
Sbjct: 88 PKRPRKVQR 95

[Close]
BLAST of MC08g0579 vs. ExPASy TrEMBL
Match: A0A2C9VZV6 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G008700 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.15e-07
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 40 PMYSLERSLERFPMESGITPSKLFPSIARKARRELFVKEVMKSRP 84
          PM +L R+LER PM+SGI P +  P  AR  RR +FVKEVM  RP
Sbjct: 5  PMCNLSRTLERLPMDSGIIPCRRLPPKARNLRRVVFVKEVMNPRP 49

The following BLAST results are available for this feature:
BLAST of MC08g0579 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g0579 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF9681636.11.38e-0652.94hypothetical protein SADUNF_Sadunf05G0022500 [Salix dunnii][more]
XP_019096302.11.97e-0439.13PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC109130756 [Camelina s... [more]
BLAST of MC08g0579 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2C9VZV65.15e-0757.78Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G008700 PE=4 SV=... [more]
BLAST of MC08g0579 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0579.1MC08g0579.1mRNA