MC08g0576 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0576
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionGibberellin-regulated protein
LocationMC08: 4660922 .. 4661179 (+)
RNA-Seq ExpressionMC08g0576
SyntenyMC08g0576
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTAACATTCCATTTTCTTTTTCTCATTCTTTTTGGTGTGTCTTTAATTTGTTGGGTTAAATTAGGTGAAGGTAGTTTCTGCAACTGGAAATGCAAAGAAAGATGCGCAAAAGCTGGAGTCCAGGATCGGTGCATCAAATACTGCGGGATCTGCTGCGAGAAGTGCCACTGCGTGCCATCAGGGACCTACGGGAATAAGCACGAGTGCCCTTGCTATGCCCAAATGAAAAACTCCAAGCGCAAGCCCAAGTGCCCT

mRNA sequence

TTTTTAACATTCCATTTTCTTTTTCTCATTCTTTTTGGTGTGTCTTTAATTTGTTGGGTTAAATTAGGTGAAGGTAGTTTCTGCAACTGGAAATGCAAAGAAAGATGCGCAAAAGCTGGAGTCCAGGATCGGTGCATCAAATACTGCGGGATCTGCTGCGAGAAGTGCCACTGCGTGCCATCAGGGACCTACGGGAATAAGCACGAGTGCCCTTGCTATGCCCAAATGAAAAACTCCAAGCGCAAGCCCAAGTGCCCT

Coding sequence (CDS)

TTTTTAACATTCCATTTTCTTTTTCTCATTCTTTTTGGTGTGTCTTTAATTTGTTGGGTTAAATTAGGTGAAGGTAGTTTCTGCAACTGGAAATGCAAAGAAAGATGCGCAAAAGCTGGAGTCCAGGATCGGTGCATCAAATACTGCGGGATCTGCTGCGAGAAGTGCCACTGCGTGCCATCAGGGACCTACGGGAATAAGCACGAGTGCCCTTGCTATGCCCAAATGAAAAACTCCAAGCGCAAGCCCAAGTGCCCT

Protein sequence

FLTFHFLFLILFGVSLICWVKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRKPKCP
Homology
BLAST of MC08g0576 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-25
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 26 SFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRKPKC 85
          SFC+ KC  RC+KAG Q+RC+KYCGICCEKCHCVPSGTYGNK ECPCY  +KNSK  PKC
Sbjct: 3  SFCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKC 62

Query: 86 P 87
          P
Sbjct: 63 P 63

BLAST of MC08g0576 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.1e-24
Identity = 54/86 (62.79%), Postives = 61/86 (70.93%), Query Frame = 0

Query: 1  FLTFHFLFLILFGVSLICWVKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVP 60
          FL    L  ++   SLI     G  SFC+ KCK RC+KAG+ DRC+KYCGICCE+C CVP
Sbjct: 4  FLLTLLLVTLVITPSLIQTTMAG-SSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVP 63

Query: 61 SGTYGNKHECPCYAQMKNSKRKPKCP 87
          SGTYGNKHECPCY   KNSK K KCP
Sbjct: 64 SGTYGNKHECPCYRDKKNSKGKSKCP 88

BLAST of MC08g0576 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.3e-21
Identity = 48/81 (59.26%), Postives = 55/81 (67.90%), Query Frame = 0

Query: 7  LFLILFGVSLICWVKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKC-HCVPSGTYG 66
          L + L   S +  +   + S C  KC  RC+KAG QDRC+KYC ICCEKC +CVPSGTYG
Sbjct: 9  LIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYG 68

Query: 67 NKHECPCYAQMKNSKRKPKCP 87
          NK ECPCY  MKNSK   KCP
Sbjct: 69 NKDECPCYRDMKNSKGTSKCP 89

BLAST of MC08g0576 vs. ExPASy Swiss-Prot
Match: C0HLQ1 (Cypmaclein OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-20
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 0

Query: 28 CNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRKPKCP 87
          C+ +C  RC+KA   DRC+KYCGICCEKC+CVP GTYGN+  CPCYA +KNSK   KCP
Sbjct: 5  CDKECNRRCSKASAHDRCLKYCGICCEKCNCVPPGTYGNEDSCPCYANLKNSKGGHKCP 63

BLAST of MC08g0576 vs. ExPASy Swiss-Prot
Match: O82328 (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.7e-20
Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 27  FCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRKPKCP 86
           +C  KC+ RC +AG++DRC+KYCGICC+ C CVPSGTYGNKHEC CY    +SK  PKCP
Sbjct: 49  WCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

BLAST of MC08g0576 vs. NCBI nr
Match: XP_022132053.1 (peamaclein-like [Momordica charantia])

HSP 1 Score: 153 bits (386), Expect = 2.29e-46
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query: 23 GEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRK 82
          GEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRK
Sbjct: 25 GEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRK 84

Query: 83 PKCP 86
          PKCP
Sbjct: 85 PKCP 88

BLAST of MC08g0576 vs. NCBI nr
Match: XP_004142881.1 (peamaclein [Cucumis sativus] >KGN62465.1 hypothetical protein Csa_018588 [Cucumis sativus])

HSP 1 Score: 123 bits (308), Expect = 1.65e-34
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 20 VKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNS 79
          + LG   FC WKC+ RC+KAGV+DRC+KYCGICCEKC CVPSGTYGNKHECPCY  +KNS
Sbjct: 19 LSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNLKNS 78

Query: 80 KRKPKCP 86
          K   KCP
Sbjct: 79 KGNSKCP 85

BLAST of MC08g0576 vs. NCBI nr
Match: XP_023546651.1 (peamaclein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122 bits (307), Expect = 2.34e-34
Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 20 VKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNS 79
          + L    FC+ KC  RCAKAGVQDRC+KYCGICCEKC CVPSGTYGNKHECPCY QMKNS
Sbjct: 19 LSLAAPGFCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGQMKNS 78

Query: 80 KRKPKCP 86
          K K KCP
Sbjct: 79 KGKSKCP 85

BLAST of MC08g0576 vs. NCBI nr
Match: XP_031270688.1 (peamaclein [Pistacia vera])

HSP 1 Score: 122 bits (306), Expect = 3.63e-34
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 0

Query: 6  FLFLILFGVSLICWVKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYG 65
          FLF+ L   S    V +    FC+ KC  RC+KAGV+DRC+KYCGICCEKC+CVPSGTYG
Sbjct: 8  FLFVSLVLTSSFFEVSMAGSDFCDSKCAVRCSKAGVKDRCLKYCGICCEKCNCVPSGTYG 67

Query: 66 NKHECPCYAQMKNSKRKPKCP 86
          NKHECPCY  MKNSK KPKCP
Sbjct: 68 NKHECPCYRDMKNSKGKPKCP 88

BLAST of MC08g0576 vs. NCBI nr
Match: KAB5526627.1 (hypothetical protein DKX38_020474 [Salix brachista])

HSP 1 Score: 122 bits (306), Expect = 3.63e-34
Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 20 VKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNS 79
          V +    FC  KC+ RC+KAGV+DRC+KYCGICCEKC CVPSGTYGNKHECPCY  MKNS
Sbjct: 22 VTMASSGFCGSKCEARCSKAGVKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 81

Query: 80 KRKPKCP 86
          K KPKCP
Sbjct: 82 KGKPKCP 88

BLAST of MC08g0576 vs. ExPASy TrEMBL
Match: A0A6J1BV69 (peamaclein-like OS=Momordica charantia OX=3673 GN=LOC111005017 PE=3 SV=1)

HSP 1 Score: 153 bits (386), Expect = 1.11e-46
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query: 23 GEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRK 82
          GEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRK
Sbjct: 25 GEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRK 84

Query: 83 PKCP 86
          PKCP
Sbjct: 85 PKCP 88

BLAST of MC08g0576 vs. ExPASy TrEMBL
Match: A0A0A0LKN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354910 PE=3 SV=1)

HSP 1 Score: 123 bits (308), Expect = 7.99e-35
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 20 VKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNS 79
          + LG   FC WKC+ RC+KAGV+DRC+KYCGICCEKC CVPSGTYGNKHECPCY  +KNS
Sbjct: 19 LSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNLKNS 78

Query: 80 KRKPKCP 86
          K   KCP
Sbjct: 79 KGNSKCP 85

BLAST of MC08g0576 vs. ExPASy TrEMBL
Match: A0A5N5KDA5 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_020474 PE=3 SV=1)

HSP 1 Score: 122 bits (306), Expect = 1.76e-34
Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 20 VKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNS 79
          V +    FC  KC+ RC+KAGV+DRC+KYCGICCEKC CVPSGTYGNKHECPCY  MKNS
Sbjct: 22 VTMASSGFCGSKCEARCSKAGVKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 81

Query: 80 KRKPKCP 86
          K KPKCP
Sbjct: 82 KGKPKCP 88

BLAST of MC08g0576 vs. ExPASy TrEMBL
Match: A0A6N2MX87 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS377645 PE=3 SV=1)

HSP 1 Score: 122 bits (305), Expect = 2.50e-34
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 20 VKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNS 79
          V +    FC  KC+ RC+KAG++DRC+KYCGICCEKC CVPSGTYGNKHECPCY  MKNS
Sbjct: 22 VTMASSGFCGSKCEARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 81

Query: 80 KRKPKCP 86
          K KPKCP
Sbjct: 82 KGKPKCP 88

BLAST of MC08g0576 vs. ExPASy TrEMBL
Match: K0E174 (Gibberellin-regulated protein OS=Populus tomentosa OX=118781 GN=GASA PE=2 SV=1)

HSP 1 Score: 121 bits (304), Expect = 3.55e-34
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 20 VKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNS 79
          V +    FC+ KC  RC+KAG++DRC+KYCGICCEKC CVPSGTYGNKHECPCY  MKNS
Sbjct: 22 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 81

Query: 80 KRKPKCP 86
          K KPKCP
Sbjct: 82 KGKPKCP 88

BLAST of MC08g0576 vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein )

HSP 1 Score: 101.7 bits (252), Expect = 3.1e-22
Identity = 48/81 (59.26%), Postives = 55/81 (67.90%), Query Frame = 0

Query: 7  LFLILFGVSLICWVKLGEGSFCNWKCKERCAKAGVQDRCIKYCGICCEKC-HCVPSGTYG 66
          L + L   S +  +   + S C  KC  RC+KAG QDRC+KYC ICCEKC +CVPSGTYG
Sbjct: 9  LIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYG 68

Query: 67 NKHECPCYAQMKNSKRKPKCP 87
          NK ECPCY  MKNSK   KCP
Sbjct: 69 NKDECPCYRDMKNSKGTSKCP 89

BLAST of MC08g0576 vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein )

HSP 1 Score: 98.6 bits (244), Expect = 2.6e-21
Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 27  FCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRKPKCP 86
           +C  KC+ RC +AG++DRC+KYCGICC+ C CVPSGTYGNKHEC CY    +SK  PKCP
Sbjct: 49  WCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

BLAST of MC08g0576 vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein )

HSP 1 Score: 96.7 bits (239), Expect = 9.9e-21
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 0

Query: 26 SFCNWKCKERCAKAGVQDRCIKYCGICCEKCHCVPSGTYGNKHECPCYAQMKNSKRKPKC 85
          S C  KC  RC+KAG  + C+KYC ICC+KC+CVPSGT+G+K ECPCY  MKNSK   KC
Sbjct: 27 SSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKC 86

Query: 86 P 87
          P
Sbjct: 87 P 87

BLAST of MC08g0576 vs. TAIR 10
Match: AT1G10588.2 (Gibberellin-regulated family protein )

HSP 1 Score: 87.0 bits (214), Expect = 7.8e-18
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 0

Query: 8  FLILFGVSLICWVKLGEGSFCNWKCKERCAKAG-VQDRCIKYCGICCEKCHCVPSGTYGN 67
          F+I   ++   +V     S C  KC  RC+KA    + C++ C ICC+KC+CVPSGTYGN
Sbjct: 10 FIISLLLTSSFYVLSSADSSCGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGN 69

Query: 68 KHECPCYAQMKNSKRKPKCP 87
          K ECPCY  MKNSK   KCP
Sbjct: 70 KDECPCYRDMKNSKGGSKCP 89

BLAST of MC08g0576 vs. TAIR 10
Match: AT1G10588.1 (Gibberellin-regulated family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-17
Identity = 41/82 (50.00%), Postives = 50/82 (60.98%), Query Frame = 0

Query: 6  FLFLILFGVSLICWVKLGEGSFCNWKCKERCAKAG-VQDRCIKYCGICCEKCHCVPSGTY 65
          F  + L   S    +   + S C  KC  RC+KA    + C++ C ICC+KC+CVPSGTY
Sbjct: 9  FFIISLLLTSSFYVLSSADSSACGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTY 68

Query: 66 GNKHECPCYAQMKNSKRKPKCP 87
          GNK ECPCY  MKNSK   KCP
Sbjct: 69 GNKDECPCYRDMKNSKGGSKCP 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P868882.9e-2577.05Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1[more]
Q948Z47.1e-2462.79Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1[more]
Q8LFM24.3e-2159.26Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 ... [more]
C0HLQ12.8e-2066.10Cypmaclein OS=Cryptomeria japonica OX=3369 PE=1 SV=1[more]
O823283.7e-2065.00Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV... [more]
Match NameE-valueIdentityDescription
XP_022132053.12.29e-46100.00peamaclein-like [Momordica charantia][more]
XP_004142881.11.65e-3473.13peamaclein [Cucumis sativus] >KGN62465.1 hypothetical protein Csa_018588 [Cucumi... [more]
XP_023546651.12.34e-3477.61peamaclein [Cucurbita pepo subsp. pepo][more]
XP_031270688.13.63e-3467.90peamaclein [Pistacia vera][more]
KAB5526627.13.63e-3474.63hypothetical protein DKX38_020474 [Salix brachista][more]
Match NameE-valueIdentityDescription
A0A6J1BV691.11e-46100.00peamaclein-like OS=Momordica charantia OX=3673 GN=LOC111005017 PE=3 SV=1[more]
A0A0A0LKN77.99e-3573.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354910 PE=3 SV=1[more]
A0A5N5KDA51.76e-3474.63Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_020474 PE=3 SV=1[more]
A0A6N2MX872.50e-3473.13Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS377645 PE=3 SV=... [more]
K0E1743.55e-3473.13Gibberellin-regulated protein OS=Populus tomentosa OX=118781 GN=GASA PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G59845.13.1e-2259.26Gibberellin-regulated family protein [more]
AT2G14900.12.6e-2165.00Gibberellin-regulated family protein [more]
AT2G39540.19.9e-2163.93Gibberellin-regulated family protein [more]
AT1G10588.27.8e-1851.25Gibberellin-regulated family protein [more]
AT1G10588.11.0e-1750.00Gibberellin-regulated family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003854Gibberellin regulated proteinPFAMPF02704GASAcoord: 27..86
e-value: 9.1E-23
score: 80.2
NoneNo IPR availablePANTHERPTHR23201:SF111GIBBERELLIN-REGULATED PROTEIN 10coord: 6..86
NoneNo IPR availablePANTHERPTHR23201EXTENSIN, PROLINE-RICH PROTEINcoord: 6..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0576.1MC08g0576.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009740 gibberellic acid mediated signaling pathway
cellular_component GO:0005576 extracellular region