MC08g0282 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0282
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCytochrome c550
LocationMC08: 2141045 .. 2141284 (-)
RNA-Seq ExpressionMC08g0282
SyntenyMC08g0282
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGATTGTCCCGGATAAAAGATTATTGGAGAGATCGAGAACGTTGAGGGATTTCAACGACGAAATCGAATTTGGGATTGAAGAATCCAGCTGGTTCCCCTGTAACATCATCAGATTGAGTTTCTTCAGATTTCCAATCTCCGGTGGCACCTGGCCGGAGAGAAGATTGTTGCTGAGATCAAGCTTCACCAGATTGGTAGCTCCTGAAATCTCCGGGGGTATAACTCCAGAAATCCTGTTT

mRNA sequence

GGGATTGTCCCGGATAAAAGATTATTGGAGAGATCGAGAACGTTGAGGGATTTCAACGACGAAATCGAATTTGGGATTGAAGAATCCAGCTGGTTCCCCTGTAACATCATCAGATTGAGTTTCTTCAGATTTCCAATCTCCGGTGGCACCTGGCCGGAGAGAAGATTGTTGCTGAGATCAAGCTTCACCAGATTGGTAGCTCCTGAAATCTCCGGGGGTATAACTCCAGAAATCCTGTTT

Coding sequence (CDS)

GGGATTGTCCCGGATAAAAGATTATTGGAGAGATCGAGAACGTTGAGGGATTTCAACGACGAAATCGAATTTGGGATTGAAGAATCCAGCTGGTTCCCCTGTAACATCATCAGATTGAGTTTCTTCAGATTTCCAATCTCCGGTGGCACCTGGCCGGAGAGAAGATTGTTGCTGAGATCAAGCTTCACCAGATTGGTAGCTCCTGAAATCTCCGGGGGTATAACTCCAGAAATCCTGTTT

Protein sequence

GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRSSFTRLVAPEISGGITPEILF
Homology
BLAST of MC08g0282 vs. NCBI nr
Match: PON56471.1 (hypothetical protein TorRG33x02_296220 [Trema orientale])

HSP 1 Score: 87.4 bits (215), Expect = 3.35e-19
Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEF-GIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLR 60
           GI+P KRL ERSRTLRD ++E E  GIEE +  PC   + + F+ PI GG  PERRLLL 
Sbjct: 57  GILPVKRLFERSRTLRDLSEESESAGIEEFNLLPCKRSKFNLFKLPIWGGIGPERRLLLM 116

Query: 61  SSFTRLVAPEISGGITPEIL 79
           S  T+LVA EI  G TPEIL
Sbjct: 117 SILTKLVALEIPTGSTPEIL 136

BLAST of MC08g0282 vs. NCBI nr
Match: GER40230.1 (cytochrome c550 [Striga asiatica])

HSP 1 Score: 87.4 bits (215), Expect = 1.11e-18
Identity = 46/80 (57.50%), Postives = 53/80 (66.25%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRS 60
           G  P ++LL+RS TLRDF DE + GI E S   C+I R S FR PIS G  P++R  LRS
Sbjct: 76  GTFPVRQLLDRSSTLRDFRDERDSGISELSSLFCSISRFSDFRLPISQGIGPDKRFALRS 135

Query: 61  SFTRLVAPEISGGITPEILF 80
             TRLVA  ISGGI PEI F
Sbjct: 136 ILTRLVAQAISGGILPEIRF 155

BLAST of MC08g0282 vs. NCBI nr
Match: KAF5445853.1 (hypothetical protein F2P56_031535 [Juglans regia])

HSP 1 Score: 58.5 bits (140), Expect = 7.42e-08
Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRS 60
           GI P+ R +++S++   +  +++ GIE  SWF  +  RLS   FP S G  PE  LLLRS
Sbjct: 85  GIKPEIRFMDKSKSASRYILDMDAGIEPLSWFLLSSARLSMPSFPKSAGISPEIWLLLRS 144

Query: 61  SFTRLVAPEISGGITPEI 78
               L +P    GI PEI
Sbjct: 145 RCINLESPTSDAGIFPEI 162

BLAST of MC08g0282 vs. NCBI nr
Match: KAG6630218.1 (hypothetical protein CIPAW_13G003100 [Carya illinoinensis])

HSP 1 Score: 58.2 bits (139), Expect = 8.42e-08
Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRS 60
           GI P+ R +++S++   +  +++ GIE  SWF  +  RLS   FP S G  PE  LLLRS
Sbjct: 59  GIKPEIRFMDKSKSASRYILDMDAGIEPLSWFLLSRARLSMPSFPKSAGISPEIWLLLRS 118

Query: 61  SFTRLVAPEISGGITPEI 78
               L +P    GI PEI
Sbjct: 119 RCINLESPTSDAGIFPEI 136

BLAST of MC08g0282 vs. NCBI nr
Match: KAF1899195.1 (hypothetical protein Lal_00019317 [Lupinus albus])

HSP 1 Score: 52.4 bits (124), Expect = 2.94e-06
Identity = 29/80 (36.25%), Postives = 43/80 (53.75%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRS 60
           GI+PD  LLERS  L   +  I+ GIE  SW     +  S  +F I+ G +PE+ L  +S
Sbjct: 31  GIIPDSLLLERSIILTSISSHIQAGIESESWLLPMSMNFSIEQFCIAEGIYPEKLLPSKS 90

Query: 61  SFTRLVAPEISGGITPEILF 80
           + +      +  GI+P+ LF
Sbjct: 91  NDSSADKYPMELGISPDKLF 110

BLAST of MC08g0282 vs. ExPASy TrEMBL
Match: A0A7N0V1S0 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.70e-23
Identity = 48/80 (60.00%), Postives = 57/80 (71.25%), Query Frame = 0

Query: 1  GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRS 60
          G+VP KRL ++SR LRDF+DE++ G EE S FPCNI  LSF RFPI+ G   ERRL L S
Sbjct: 12 GMVPVKRLSDKSRRLRDFSDEMDIGTEEVSLFPCNISMLSFLRFPIAEGIEDERRLWLAS 71

Query: 61 SFTRLVAPEISGGITPEILF 80
          +FTR  A EIS G  PE +F
Sbjct: 72 NFTRFWALEISEGTAPESIF 91

BLAST of MC08g0282 vs. ExPASy TrEMBL
Match: A0A2P5C645 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_296220 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.62e-19
Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEF-GIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLR 60
           GI+P KRL ERSRTLRD ++E E  GIEE +  PC   + + F+ PI GG  PERRLLL 
Sbjct: 57  GILPVKRLFERSRTLRDLSEESESAGIEEFNLLPCKRSKFNLFKLPIWGGIGPERRLLLM 116

Query: 61  SSFTRLVAPEISGGITPEIL 79
           S  T+LVA EI  G TPEIL
Sbjct: 117 SILTKLVALEIPTGSTPEIL 136

BLAST of MC08g0282 vs. ExPASy TrEMBL
Match: A0A5A7Q4V2 (Cytochrome c550 OS=Striga asiatica OX=4170 GN=STAS_16892 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.36e-19
Identity = 46/80 (57.50%), Postives = 53/80 (66.25%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRS 60
           G  P ++LL+RS TLRDF DE + GI E S   C+I R S FR PIS G  P++R  LRS
Sbjct: 76  GTFPVRQLLDRSSTLRDFRDERDSGISELSSLFCSISRFSDFRLPISQGIGPDKRFALRS 135

Query: 61  SFTRLVAPEISGGITPEILF 80
             TRLVA  ISGGI PEI F
Sbjct: 136 ILTRLVAQAISGGILPEIRF 155

BLAST of MC08g0282 vs. ExPASy TrEMBL
Match: J3LVE7 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.21e-06
Identity = 34/76 (44.74%), Postives = 39/76 (51.32%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRS 60
           G  P  RLL RSR L  F      GIE +   P +  R      PISGG+ PER L  RS
Sbjct: 362 GTGPASRLLPRSRKLMLFIPATAAGIEPARRLPPSRSRTRLAALPISGGSGPERSLERRS 421

Query: 61  SFTRLVAPEISGGITP 76
           S  RL + +  GGITP
Sbjct: 422 SLVRLRSRKRPGGITP 437

BLAST of MC08g0282 vs. ExPASy TrEMBL
Match: A0A6A5PMG1 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00019317 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.43e-06
Identity = 29/80 (36.25%), Postives = 43/80 (53.75%), Query Frame = 0

Query: 1   GIVPDKRLLERSRTLRDFNDEIEFGIEESSWFPCNIIRLSFFRFPISGGTWPERRLLLRS 60
           GI+PD  LLERS  L   +  I+ GIE  SW     +  S  +F I+ G +PE+ L  +S
Sbjct: 31  GIIPDSLLLERSIILTSISSHIQAGIESESWLLPMSMNFSIEQFCIAEGIYPEKLLPSKS 90

Query: 61  SFTRLVAPEISGGITPEILF 80
           + +      +  GI+P+ LF
Sbjct: 91  NDSSADKYPMELGISPDKLF 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
PON56471.13.35e-1958.75hypothetical protein TorRG33x02_296220 [Trema orientale][more]
GER40230.11.11e-1857.50cytochrome c550 [Striga asiatica][more]
KAF5445853.17.42e-0841.03hypothetical protein F2P56_031535 [Juglans regia][more]
KAG6630218.18.42e-0841.03hypothetical protein CIPAW_13G003100 [Carya illinoinensis][more]
KAF1899195.12.94e-0636.25hypothetical protein Lal_00019317 [Lupinus albus][more]
Match NameE-valueIdentityDescription
A0A7N0V1S01.70e-2360.00Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1[more]
A0A2P5C6451.62e-1958.75Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_296220 PE=4 SV... [more]
A0A5A7Q4V25.36e-1957.50Cytochrome c550 OS=Striga asiatica OX=4170 GN=STAS_16892 PE=4 SV=1[more]
J3LVE71.21e-0644.74Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1[more]
A0A6A5PMG11.43e-0636.25Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00019317 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0282.1MC08g0282.1mRNA