MC08g0038 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.GCCGGAGGAGAATTATTTGGAGGAGGAATAATGGCGGGATTCCAAGGTGTGGTGCGGAGCGAAGAGGAAGCGGAAATGCCCGCTGCTGCCATTAGAGACCAGTGGGAAGTTCAATTCTCTCGCTTCATTTGCTATCCAAGTAGCGCCGCCACCACCACCAACAACGCCAGCCTCCATCCTCTCTTTCCCCGTCTCCGGAATCGCCCGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGCTATTCTGCAACTCCTCCACCGTTGCTCCTCCCCTGATTTGATTCTCACCGTGCGTTTTCGAGATAAGATCCTTGTGAGTTCTTGATTTTCCACTCTCTCCAACTTTCTAATCGCATCTGTACGAGTAGACTTGTGAGAGAAGAAATGTTTGGTTACGCTAAATATTATACGTTTGCTTCTTCAGGATCCTTGAACGGTATCGTTCATGCATTTAATATTTTTACTATTTCATTTCTTTTCCATTGGTTTGAATTCATGTAGTTTCCGATCAATGGCCCTGAAATCAATCAGATCATTTGCTAGTCTCCGCCAAAGGAGTCTGTCTCTTGTTTTCCTCGAATTCCCCCATCCCCTCACGGCATGGAGGATTACCTTCTTGGCTTCCTGTTGACCTCATTTTATACGCTTTAAGCGGTAGTTATTTCATTTACTACACCTTAGTGGATCCGGTGGAACGTGGGAAGTTCTACTTTGTAAGATGATTATGTGAAGTGAACCAACCTTCCTCTGGCAATTCAAATGCAGCATCTTATAATGAGTTCAGTGGTTTATTACAATATTATCCTGCCAAAATTCCAATCTAAGACTCGATTTCTATTATTTGGATGTGTTAACCGCAATGGATTAAGCATGTATTACTGGCATACTGATGTAGGAAGAGCACTACCTCTCCAAGCTTCATTTCTCATGGCCTCAGGTGTCCTGTATCTCTGGTTTTCCTGCCAGAGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGCTAACGAGGTAAGTCAGTATATATGTTCATGAAGATTTTGTCAATTTCTGTGGTGCTTTGTGATTTCAAAAGTTTTCTGAGGATGAGTTTTGGGTTGTTGAACCTCACAGCACACTCGTTTGTCTTTGCAGATCCAAAAGTTTGCCCTAAGATTTTCAACAGCTTACGAAACTGATTCATTTGTGAACATTCTCAAGGTAATTAATATGAATTTCTTTTATGGTAAGGTTTGATGGAAGATTTTTCGTTCTATAACCTTACTGCTGCTATCTTGTTTCAGGAAATGGCGGAGGATGCAAGAGATATTCAACCAATAAGCAGCGAATTTGGGTCTCGGATTACAACACAATCCGAGTTATTATCTTCAAACAGACCGTCTGATAGGTGAATGAAAATTCTCGTATAATCAATAATCTAATGCATCATTTTCTTTTTGTTGTCACAGCGAGAAGGAGATGTTGATGTATTTTCTGTTTTCAGCCTTTGTGAAGAATTGAGCAATTCTATTGTCCAGCCTTACACTCCTGAAATGCCTTTGAGCTTAAAAGATACTGTAGAGACATACCCATGTTCTCAAGAAAGAGCACATCTTGACCACTTAGAAAGCGTCTTTGCAGCTTTGCCTCCCAGTTTCACGTCTATGCTGTCAAACTGTTCAGATGTCAAACAAGGTCTGATATGACAAATTTAGAATGAAAATTCTTTCAAATTATCGTAGTGACAAATTTCCTTTCTTATAAAGGTAAAACTGCAGCTCAGCCATCTACTACAAAGGATAATGATCTAAAGTCTCAAATCATGGTATGTTCCACTATTACCAAATGTAATTTCGTTTTGTGCTACTCACATCATTGATTTATTTATTAAATGGTTTGATTCATTTTCCAACAGCGTCGTTGAGTTATTAATTTATTGAATTTGTCTTATGACAGAAATGTATGGAAGATTCTTCCTTTCAAGGTACGACTATAGCAACGCTTTATTTATAGTTGCAACTGTTTCCATATATGTCCTGCGTTTTAGAACTGTTCTCGTCAATTCAACGAGATGGAGTCAGAGGGTTCTGGAGGTCTAATTTCAGTTTACCTATTTTATTTTGCTCGATTGTTTTCTTTTTTGGGCTGGGCTTAGTTTTCAATAATACACAACATTTCAATAATCATATTCCATAACAACAGCCAGTAATAAATTTTTTAAGGGTACTGAGGCTAATTCGAGGATAGTTTGGCAGATGAAGCACTTGTTACCATCCTTCAAATCGATGGTTCGATCCCCACCCTACAATTATTGAACTAAAAAAAAATCAATGATTGAGAATTTGTATAGCTTACCAATGAATATCTCTTTATATGTGCCTACTTTTTGTTTAACGAGATGCAATTCCAAATTATACATTTGCAAGCCGACAAGTGAATGATTTATTCGTACATAACCGAGAATATTAGATACTGATATATTGGTTTAAATTCTTGGTGCTTGCCAGATATGTTGAACAGAGTTGAGAAAATTGTCAACGAAATTGGAGGTGATTTGCCGCTGTAATCTCAGGGTAATGTACGTAACATTTGACGCCTTTACATGTCTTTTCATTAGCTCCCAGCCGTGGCCACATTATCTTCGCATACACATCCTAGTTACTACTTAATCGTCATACAATTTGCAGTCCTGTTTTCTCTGAGCTACACAGAATATTTTAGTTAGTTTGAGGGTACATTGGCTTCTTACTTGTGAACTTCTGAATATTAGACCAAATATCTTGTTGATAATTGGGGAAATTAATAGACCGAACAGAATTGTAAATGCTGTGGGTGTAGATTTCATTCGGTTTTAGAAAATTAGGGTTTTTGTAAAATTTTAGAAATGGTATTTTATGATGAAGTGGTCACCTTTCCGCCC GCCGGAGGAGAATTATTTGGAGGAGGAATAATGGCGGGATTCCAAGGTGTGGTGCGGAGCGAAGAGGAAGCGGAAATGCCCGCTGCTGCCATTAGAGACCAGTGGGAAGTTCAATTCTCTCGCTTCATTTGCTATCCAAGTAGCGCCGCCACCACCACCAACAACGCCAGCCTCCATCCTCTCTTTCCCCGTCTCCGGAATCGCCCGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGCTATTCTGCAACTCCTCCACCGTTGCTCCTCCCCTGATTTGATTCTCACCGTGCGTTTTCGAGATAAGATCCTTGAAGAGCACTACCTCTCCAAGCTTCATTTCTCATGGCCTCAGGTGTCCTGTATCTCTGGTTTTCCTGCCAGAGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGCTAACGAGGTAAGTCAGTATATAATGAAGATTTTGTCAATTTCTGTGATCCAAAAGTTTGCCCTAAGATTTTCAACAGCTTACGAAACTGATTCATTTGTGAACATTCTCAAGGAAATGGCGGAGGATGCAAGAGATATTCAACCAATAAGCAGCGAATTTGGGTCTCGGATTACAACACAATCCGAGTTATTATCTTCAAACAGACCGTCTGATAGCCTTTGTGAAGAATTGAGCAATTCTATTGTCCAGCCTTACACTCCTGAAATGCCTTTGAGCTTAAAAGATACTGTAGAGACATACCCATGTTCTCAAGAAAGAGCACATCTTGACCACTTAGAAAGCGTCTTTGCAGCTTTGCCTCCCAGTTTCACGTCTATGCTGTCAAACTGTTCAGATGTCAAACAAGGTAAAACTGCAGCTCAGCCATCTACTACAAAGGATAATGATCTAAAGTCTCAAATCATGAAATGTATGGAAGATTCTTCCTTTCAAGATATGTTGAACAGAGTTGAGAAAATTGTCAACGAAATTGGAGGTGATTTGCCGCTGTAATCTCAGGGTAATGTACGTAACATTTGACGCCTTTACATGTCTTTTCATTAGCTCCCAGCCGTGGCCACATTATCTTCGCATACACATCCTAGTTACTACTTAATCGTCATACAATTTGCAGTCCTGTTTTCTCTGAGCTACACAGAATATTTTAGTTAGTTTGAGGGTACATTGGCTTCTTACTTGTGAACTTCTGAATATTAGACCAAATATCTTGTTGATAATTGGGGAAATTAATAGACCGAACAGAATTGTAAATGCTGTGGGTGTAGATTTCATTCGGTTTTAGAAAATTAGGGTTTTTGTAAAATTTTAGAAATGGTATTTTATGATGAAGTGGTCACCTTTCCGCCC ATGGCGGGATTCCAAGGTGTGGTGCGGAGCGAAGAGGAAGCGGAAATGCCCGCTGCTGCCATTAGAGACCAGTGGGAAGTTCAATTCTCTCGCTTCATTTGCTATCCAAGTAGCGCCGCCACCACCACCAACAACGCCAGCCTCCATCCTCTCTTTCCCCGTCTCCGGAATCGCCCGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGCTATTCTGCAACTCCTCCACCGTTGCTCCTCCCCTGATTTGATTCTCACCGTGCGTTTTCGAGATAAGATCCTTGAAGAGCACTACCTCTCCAAGCTTCATTTCTCATGGCCTCAGGTGTCCTGTATCTCTGGTTTTCCTGCCAGAGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGCTAACGAGGTAAGTCAGTATATAATGAAGATTTTGTCAATTTCTGTGATCCAAAAGTTTGCCCTAAGATTTTCAACAGCTTACGAAACTGATTCATTTGTGAACATTCTCAAGGAAATGGCGGAGGATGCAAGAGATATTCAACCAATAAGCAGCGAATTTGGGTCTCGGATTACAACACAATCCGAGTTATTATCTTCAAACAGACCGTCTGATAGCCTTTGTGAAGAATTGAGCAATTCTATTGTCCAGCCTTACACTCCTGAAATGCCTTTGAGCTTAAAAGATACTGTAGAGACATACCCATGTTCTCAAGAAAGAGCACATCTTGACCACTTAGAAAGCGTCTTTGCAGCTTTGCCTCCCAGTTTCACGTCTATGCTGTCAAACTGTTCAGATGTCAAACAAGGTAAAACTGCAGCTCAGCCATCTACTACAAAGGATAATGATCTAAAGTCTCAAATCATGAAATGTATGGAAGATTCTTCCTTTCAAGATATGTTGAACAGAGTTGAGAAAATTGTCAACGAAATTGGAGGTGATTTGCCGCTGTAA MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSQYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSRITTQSELLSSNRPSDSLCEELSNSIVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQGKTAAQPSTTKDNDLKSQIMKCMEDSSFQDMLNRVEKIVNEIGGDLPL Homology
BLAST of MC08g0038 vs. ExPASy Swiss-Prot
Match: Q45GQ7 (Protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Arabidopsis thaliana OX=3702 GN=PHS1 PE=1 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.5e-42 Identity = 124/348 (35.63%), Postives = 181/348 (52.01%), Query Frame = 0
BLAST of MC08g0038 vs. ExPASy Swiss-Prot
Match: Q6W2J0 (Protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Zea mays OX=4577 GN=PHS1 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.9e-22 Identity = 91/334 (27.25%), Postives = 147/334 (44.01%), Query Frame = 0
BLAST of MC08g0038 vs. NCBI nr
Match: XP_022131407.1 (protein POOR HOMOLOGOUS SYNAPSIS 1 [Momordica charantia]) HSP 1 Score: 590 bits (1520), Expect = 5.58e-212 Identity = 301/315 (95.56%), Postives = 302/315 (95.87%), Query Frame = 0
BLAST of MC08g0038 vs. NCBI nr
Match: KAG6585176.1 (Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 467 bits (1201), Expect = 4.68e-163 Identity = 240/323 (74.30%), Postives = 269/323 (83.28%), Query Frame = 0
BLAST of MC08g0038 vs. NCBI nr
Match: XP_023538055.1 (protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita pepo subsp. pepo] >XP_023538056.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 459 bits (1182), Expect = 2.13e-160 Identity = 237/321 (73.83%), Postives = 266/321 (82.87%), Query Frame = 0
BLAST of MC08g0038 vs. NCBI nr
Match: KAG7020096.1 (Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 455 bits (1171), Expect = 1.44e-158 Identity = 237/323 (73.37%), Postives = 264/323 (81.73%), Query Frame = 0
BLAST of MC08g0038 vs. NCBI nr
Match: XP_022951934.1 (protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita moschata]) HSP 1 Score: 452 bits (1164), Expect = 1.45e-157 Identity = 235/327 (71.87%), Postives = 264/327 (80.73%), Query Frame = 0
BLAST of MC08g0038 vs. ExPASy TrEMBL
Match: A0A6J1BQX6 (protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Momordica charantia OX=3673 GN=LOC111004631 PE=4 SV=1) HSP 1 Score: 590 bits (1520), Expect = 2.70e-212 Identity = 301/315 (95.56%), Postives = 302/315 (95.87%), Query Frame = 0
BLAST of MC08g0038 vs. ExPASy TrEMBL
Match: A0A6J1GK72 (protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Cucurbita moschata OX=3662 GN=LOC111454670 PE=4 SV=1) HSP 1 Score: 452 bits (1164), Expect = 7.02e-158 Identity = 235/327 (71.87%), Postives = 264/327 (80.73%), Query Frame = 0
BLAST of MC08g0038 vs. ExPASy TrEMBL
Match: A0A6J1KPK1 (protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Cucurbita maxima OX=3661 GN=LOC111496445 PE=4 SV=1) HSP 1 Score: 450 bits (1157), Expect = 6.35e-157 Identity = 233/320 (72.81%), Postives = 265/320 (82.81%), Query Frame = 0
BLAST of MC08g0038 vs. ExPASy TrEMBL
Match: A0A7N2L9L7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 2.38e-91 Identity = 164/318 (51.57%), Postives = 215/318 (67.61%), Query Frame = 0
BLAST of MC08g0038 vs. ExPASy TrEMBL
Match: A0A2I4DDJ4 (protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Juglans regia OX=51240 GN=LOC108979080 PE=4 SV=1) HSP 1 Score: 280 bits (717), Expect = 2.78e-90 Identity = 161/319 (50.47%), Postives = 214/319 (67.08%), Query Frame = 0
BLAST of MC08g0038 vs. TAIR 10
Match: AT1G10710.2 (poor homologous synapsis 1 ) HSP 1 Score: 172.2 bits (435), Expect = 6.8e-43 Identity = 124/348 (35.63%), Postives = 181/348 (52.01%), Query Frame = 0
BLAST of MC08g0038 vs. TAIR 10
Match: AT1G10710.1 (poor homologous synapsis 1 ) HSP 1 Score: 169.5 bits (428), Expect = 4.4e-42 Identity = 123/346 (35.55%), Postives = 179/346 (51.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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