MC08g0025 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGCAGCGTCGGAACCCCGGGCTAGGGCAGAAAGCGAAGATGATCATCCCAGTACGTTGCTTCACTTGCGGAAAGGTAAGCCATGGAGAAATAAATTCAATTTTTAGTTTAACTACCTTCTACTTATACTCCTATGTGGGAGCCTCTTCTGCAAATTTGCGTTTTTTCTGTTTTCTTGTGTGCAACTATCTTTATCTTTGGTTTGCTGCTTACGAGCACGATAAATTTTTGAATTTGTAATTTGTCAGGTGATTGGAAACAAATGGGATCATTACCTTGATCTTCTACAGGCAGACTATTCTGAAGGGTACGGATGTAGCCTCCCCTTTTCTTGTCATTTTAAGTTCTCACTCTAAAATTTCTCTCTCAAATTCCTTCTGGACTTTGAAGATTGCCTGGTCAATGTACGATATCTAACCTTTAACCTTGCTATGTAAAGATGATGCTGATGCGTTTTTTCTTGTATTAGAGATGCTCTCGATGCACTGGGCTTGGTTCGCTACTGCTGTAGGCGAATGCTCATGACTCATGTAGACCTTATCGAAAAGCTTCTTAATTACAACAGTAATTTCTCTCTCTTTCTCTACATTCATGCACGA AGGCAGCGTCGGAACCCCGGGCTAGGGCAGAAAGCGAAGATGATCATCCCAGTACGTTGCTTCACTTGCGGAAAGGTGATTGGAAACAAATGGGATCATTACCTTGATCTTCTACAGGCAGACTATTCTGAAGGAGATGCTCTCGATGCACTGGGCTTGGTTCGCTACTGCTGTAGGCGAATGCTCATGACTCATGTAGACCTTATCGAAAAGCTTCTTAATTACAACAGTAATTTCTCTCTCTTTCTCTACATTCATGCACGA AGGCAGCGTCGGAACCCCGGGCTAGGGCAGAAAGCGAAGATGATCATCCCAGTACGTTGCTTCACTTGCGGAAAGGTGATTGGAAACAAATGGGATCATTACCTTGATCTTCTACAGGCAGACTATTCTGAAGGAGATGCTCTCGATGCACTGGGCTTGGTTCGCTACTGCTGTAGGCGAATGCTCATGACTCATGTAGACCTTATCGAAAAGCTTCTTAATTACAACAGTAATTTCTCTCTCTTTCTCTACATTCATGCACGA RQRRNPGLGQKAKMIIPVRCFTCGKVIGNKWDHYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNSNFSLFLYIHAR Homology
BLAST of MC08g0025 vs. ExPASy Swiss-Prot
Match: Q9SYA6 (DNA-directed RNA polymerase subunit 10-like protein OS=Arabidopsis thaliana OX=3702 GN=NRPB10L PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 8.0e-31 Identity = 59/64 (92.19%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy Swiss-Prot
Match: Q8LFJ6 (DNA-directed RNA polymerases II, IV and V subunit 10 OS=Arabidopsis thaliana OX=3702 GN=NRPB10 PE=1 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 4.0e-30 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy Swiss-Prot
Match: Q39290 (DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Brassica napus OX=3708 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 4.0e-30 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy Swiss-Prot
Match: Q55AB6 (DNA-directed RNA polymerases I, II, and III subunit rpabc5 OS=Dictyostelium discoideum OX=44689 GN=polr2l PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 4.1e-27 Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy Swiss-Prot
Match: Q32P78 (DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Bos taurus OX=9913 GN=POLR2L PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 7.0e-27 Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of MC08g0025 vs. NCBI nr
Match: KAA0057130.1 (DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Cucumis melo var. makuwa] >TYJ97111.1 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (364), Expect = 5.16e-43 Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of MC08g0025 vs. NCBI nr
Match: KAF9825663.1 (hypothetical protein H0E87_032116, partial [Populus deltoides]) HSP 1 Score: 144 bits (364), Expect = 6.35e-43 Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0
BLAST of MC08g0025 vs. NCBI nr
Match: KAB5564305.1 (hypothetical protein DKX38_004359 [Salix brachista]) HSP 1 Score: 144 bits (363), Expect = 3.16e-42 Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of MC08g0025 vs. NCBI nr
Match: KAG6782578.1 (hypothetical protein POTOM_011988 [Populus tomentosa]) HSP 1 Score: 144 bits (364), Expect = 5.72e-42 Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0
BLAST of MC08g0025 vs. NCBI nr
Match: KAF9685616.1 (hypothetical protein SADUNF_Sadunf03G0073100 [Salix dunnii]) HSP 1 Score: 142 bits (359), Expect = 5.79e-42 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy TrEMBL
Match: A0A5A7UPU3 (DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold371G00170 PE=3 SV=1) HSP 1 Score: 144 bits (364), Expect = 2.50e-43 Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy TrEMBL
Match: A0A5N5N9W5 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_004359 PE=3 SV=1) HSP 1 Score: 144 bits (363), Expect = 1.53e-42 Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy TrEMBL
Match: A0A453FTM1 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1) HSP 1 Score: 143 bits (360), Expect = 2.52e-42 Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy TrEMBL
Match: I1K9Q6 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G096400 PE=3 SV=1) HSP 1 Score: 141 bits (355), Expect = 3.72e-42 Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of MC08g0025 vs. ExPASy TrEMBL
Match: T1MEG7 (Uncharacterized protein OS=Triticum urartu OX=4572 PE=3 SV=1) HSP 1 Score: 140 bits (353), Expect = 8.40e-42 Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of MC08g0025 vs. TAIR 10
Match: AT1G61700.1 (RNA polymerases N / 8 kDa subunit ) HSP 1 Score: 134.0 bits (336), Expect = 5.7e-32 Identity = 59/64 (92.19%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of MC08g0025 vs. TAIR 10
Match: AT1G11475.1 (RNA polymerases N / 8 kDa subunit ) HSP 1 Score: 131.7 bits (330), Expect = 2.8e-31 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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