Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAAGGACAGTCTGTCGCTTGATGAGTACATCAAAAAATTCAAGAACTTGGGTGACAGATTAGCCGCCATGAAGAAACCTCTTGACAATCTAACTAAGGTGATGCATTTAGCAAGAGGTTTGGGAAGCAATTATAGAGAATTCAAAACAGACATGTTCTCAAAGCCACCATATCCCACATATAATCAATTCTAACTGGCACTAAAGAATCATGAGCACAGTAGATCAATCTTGAAGCAGAGGAAGGAAAAATTTCTGTCATGGACCATAATCAAGCCTTATACTCTCAAAGGGGAAGAAACAAAGGACGAGGCAGGCATTTCTCCTCAATAGGACGAGGATTTCAACAAGGCAGACCTCATATAATGCAACAACCAGATCTGAAGCAGTCCCCTCAAAGACTCCAAACTGAAAAAACAAATGAGAACTCTCCCTTTAAGGCTGAAGGACGAGTAAGTTGTCAAATATGTGGAAAATTTAATCACACTGCCATTGAATGTTGGAACAGATTTGATCATAGCTTTCAACTTGAGGATTTGCCTAAAGCACTAGCTGCATTCAACTTGAAGGATACATCAGATCAGAATCTCTACGCAGATTCAGGCGCTACTTCTCATGTGTTAAATGATGCTGGTAAGCTAGCTTCAGTTAAAACCTATAAAGGAAAAGAATCAATTTATATAGGTGATGGTAATGTTTTAGAAATATCTCATATAAGACATAGTAAATTAAGTACTGATTTTGGAAACTTAGTCCTTAAAGATGTCCTTGATGTACCTAACATGACAAAAAAATCTTCTCTCAGTAAACTAGCTAAGGACAATGATTGTGTTATTACTTTCTCCACTGACAATTTCGTTGTTAAGAACAAACAGGGGGAGATCCTAGCGAAGGGACATAAGAAAGGAGGACTTTATGCATTGGATCTACGCTAGCCGCAACAGATTGATGGTTTACATGCGTATCTAGCTTCCACCGGCACGAATAAGGCTCCCTATTCTATATGGCATAGAAGAATGAGACATTTAAATGAAAGTTATATTAGAGTTTTGAGCAATAATAATGCTATTGATGTTTCTAGTTGGAAAAAACTTGAGAATGTGTGTACTGAATGCCAAATGGGCAAAAGTTCTAAATTACCTTTTTATTCAAATCATAATTTAAATATGGCATTGGGGGCTGCTCCTATCTCATCTTGTC
mRNA sequence
ATGGACCATAATCAAGCCTTATACTCTCAAAGGGGAAGAAACAAAGGACGAGGCAGGCATTTCTCCTCAATAGGACGAGGATTTCAACAAGGCAGACCTCATATAATGCAACAACCAGATCTGAAGCAGTCCCCTCAAAGACTCCAAACTGAAAAAACAAATGAGAACTCTCCCTTTAAGGCTGAAGGACGAGTAAGTTGTCAAATATGTGGAAAATTTAATCACACTGCCATTGAATGTTGGAACAGATTTGATCATAGCTTTCAACTTGAGGATTTGCCTAAAGCACTAGCTGCATTCAACTTGAAGGATACATCAGATCAGAATCTCTACGCAGATTCAGGCGCTACTTCTCATGTGTTAAATGATGCTGGTAAGCTAGCTTCAGTTAAAACCTATAAAGGAAAAGAATCAATTTATATAGGTGATGGTAATGTTTTAGAAATATCTCATATAAGACATAGTAAATTAAGTACTGATTTTGGAAACTTAGTCCTTAAAGATGTCCTTGATGTACCTAACATGACAAAAAAATCTTCTCTCAGTAAACTAGCTAAGGACAATGATTGTGTTATTACTTTCTCCACTGACAATTTCGTTGTTAAGAACAAACAGGGGGAGATCCTAGCGAAGGGACATAAGAAAGGAGGACTTTATGCATTGGATCTACGCTAG
Coding sequence (CDS)
ATGGACCATAATCAAGCCTTATACTCTCAAAGGGGAAGAAACAAAGGACGAGGCAGGCATTTCTCCTCAATAGGACGAGGATTTCAACAAGGCAGACCTCATATAATGCAACAACCAGATCTGAAGCAGTCCCCTCAAAGACTCCAAACTGAAAAAACAAATGAGAACTCTCCCTTTAAGGCTGAAGGACGAGTAAGTTGTCAAATATGTGGAAAATTTAATCACACTGCCATTGAATGTTGGAACAGATTTGATCATAGCTTTCAACTTGAGGATTTGCCTAAAGCACTAGCTGCATTCAACTTGAAGGATACATCAGATCAGAATCTCTACGCAGATTCAGGCGCTACTTCTCATGTGTTAAATGATGCTGGTAAGCTAGCTTCAGTTAAAACCTATAAAGGAAAAGAATCAATTTATATAGGTGATGGTAATGTTTTAGAAATATCTCATATAAGACATAGTAAATTAAGTACTGATTTTGGAAACTTAGTCCTTAAAGATGTCCTTGATGTACCTAACATGACAAAAAAATCTTCTCTCAGTAAACTAGCTAAGGACAATGATTGTGTTATTACTTTCTCCACTGACAATTTCGTTGTTAAGAACAAACAGGGGGAGATCCTAGCGAAGGGACATAAGAAAGGAGGACTTTATGCATTGGATCTACGCTAG
Protein sequence
MDHNQALYSQRGRNKGRGRHFSSIGRGFQQGRPHIMQQPDLKQSPQRLQTEKTNENSPFKAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDLPKALAAFNLKDTSDQNLYADSGATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKLSTDFGNLVLKDVLDVPNMTKKSSLSKLAKDNDCVITFSTDNFVVKNKQGEILAKGHKKGGLYALDLR
Homology
BLAST of MC07g_new0035 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 53/177 (29.94%), Postives = 80/177 (45.20%), Query Frame = 0
Query: 54 NENSPFKAEGRVSCQICGKFNHTAIEC--WNRFDHSFQLEDLPKALAAFNLKDT------ 113
N++ P+ + CQICG H+A C F S + P + +
Sbjct: 270 NQSKPYLGK----CQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSP 329
Query: 114 -SDQNLYADSGATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKLSTDFGNL 173
S N DSGAT H+ +D L+ + Y G + + + DG+ + ISH + LST L
Sbjct: 330 YSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPL 389
Query: 174 VLKDVLDVPNMTKK-SSLSKLAKDNDCVITFSTDNFVVKN-KQGEILAKGHKKGGLY 220
L ++L VPN+ K S+ +L N + F +F VK+ G L +G K LY
Sbjct: 390 NLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY 442
BLAST of MC07g_new0035 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 3.4e-09
Identity = 53/167 (31.74%), Postives = 74/167 (44.31%), Query Frame = 0
Query: 67 CQICGKFNHTAIECWNRFDHSFQLED------------LPKALAAFNLKDTSDQNLYADS 126
CQIC H+A C H FQ P+A A N + N DS
Sbjct: 258 CQICSVQGHSAKRCPQL--HQFQSTTNQQQSTSPFTPWQPRANLAVN-SPYNANNWLLDS 317
Query: 127 GATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKLSTDFGNLVLKDVLDVPN 186
GAT H+ +D L+ + Y G + + I DG+ + I+H + L T +L L VL VPN
Sbjct: 318 GATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPN 377
Query: 187 MTKK-SSLSKLAKDNDCVITFSTDNFVVKN-KQGEILAKGHKKGGLY 220
+ K S+ +L N + F +F VK+ G L +G K LY
Sbjct: 378 IHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELY 421
BLAST of MC07g_new0035 vs. NCBI nr
Match:
TXG63956.1 (hypothetical protein EZV62_010950 [Acer yangbiense])
HSP 1 Score: 205 bits (521), Expect = 8.48e-58
Identity = 101/165 (61.21%), Postives = 125/165 (75.76%), Query Frame = 0
Query: 60 KAEGRVSCQICGKFNHTAIECWNRFDHSFQLED-LPKALAAFNLKDTSDQNLYADSGATS 119
+ E ++CQICGKFNHTA+ECWNRFDHS+Q ED LPKALAA NLK+ D NLYADSGAT+
Sbjct: 106 QGESTMTCQICGKFNHTALECWNRFDHSYQPEDHLPKALAAMNLKNKDDPNLYADSGATT 165
Query: 120 HVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKLSTDFGNLVLKDVLDVPNMTKK 179
H+LND GKL+ V YKG ++I +G+G L ISHI K+ T G L LK+VL VPN+ K
Sbjct: 166 HILNDPGKLSKVMRYKGNDTILVGNGESLNISHIGEGKIETKDGTLDLKNVLIVPNIKKN 225
Query: 180 S-SLSKLAKDNDCVITFSTDNFVVKNKQGEILAKGHKKGGLYALD 222
S+ +LA DN C I F+ +NF VK++QG+I+AKG K GGLYALD
Sbjct: 226 LISVGQLASDNACTIEFNANNFFVKSQQGKIIAKGRKNGGLYALD 270
BLAST of MC07g_new0035 vs. NCBI nr
Match:
RVW43526.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 186 bits (471), Expect = 6.17e-50
Identity = 106/251 (42.23%), Postives = 155/251 (61.75%), Query Frame = 0
Query: 1 MDHNQALYSQRGRNKGRGRHFSSIGRGFQQ-GRPHIMQQPDLKQS--------------- 60
++H QA ++QRGR + RG F S GRGF GR + D +Q+
Sbjct: 264 INHEQAYFTQRGRGRNRGGRFLSRGRGFTPAGRFNNNATSDQRQNVYSSTRNPRNSFNNQ 323
Query: 61 --PQRLQTE--KTNENSPF-------KAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDL 120
PQ++ T + + N+ F K+EG + CQIC K NH+A++CWNRFD+ +QLE++
Sbjct: 324 FPPQQISTRNPRNSFNNQFPPQQKLQKSEGTLICQICSKANHSALDCWNRFDYLYQLEEI 383
Query: 121 PKALAAFNL-KDTSDQNLYADSGATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHI 180
P+ALAA L ++ D N Y DSGAT+H+ ND GK++ V YKG ++I++G+G L ISHI
Sbjct: 384 PQALAAMALHEEEKDPNFYVDSGATAHITNDPGKMSQVIPYKGHDAIFVGNGEALRISHI 443
Query: 181 RHSKLSTDFGNLVLKDVLDVPNMTKKS-SLSKLAKDNDCVITFSTDNFVVKNKQGEILAK 222
++L T +L LK +L VP + K S+ +L DN C I FS+ FV+K++ ++LA+
Sbjct: 444 GEARLKTKHRDLKLKKLLVVPEIKKNLLSIGQLTSDNACSIEFSSTGFVIKDQLQQVLAR 503
BLAST of MC07g_new0035 vs. NCBI nr
Match:
PNY13708.1 (hypothetical protein L195_g010371 [Trifolium pratense])
HSP 1 Score: 183 bits (464), Expect = 3.77e-49
Identity = 101/229 (44.10%), Postives = 139/229 (60.70%), Query Frame = 0
Query: 1 MDHNQALYSQRGRNKGR----GR-HFSSIGRGFQQ-GRPHIMQQPDLKQSPQRLQTEKTN 60
M+H QA +SQR R +GR GR HF+S GRGF GR + Q + R + +
Sbjct: 241 MEHAQAFFSQRARGRGRSARGGRGHFNSQGRGFTPAGRYNRQQNNEFFFKHNRNSKGEKS 300
Query: 61 ENSPFKAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDLPKALAAFNLKDTSDQNLYADS 120
+ E CQIC K NH A++CW R+D+S+Q ED P+A AA L DT DQ+ DS
Sbjct: 301 RPTTQPNESNSDCQICKKPNHEAVDCWYRYDYSYQSEDFPQAFAALALNDTKDQSFIVDS 360
Query: 121 GATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKLSTDFGNLVLKDVLDVPN 180
GATSH++NDAG L+ VK Y+G + IY+GDGN + I+H + + GNL LKDVL VP+
Sbjct: 361 GATSHMINDAGNLSYVKPYRGNDVIYVGDGNSIPITHTGDVNVISTTGNLKLKDVLVVPD 420
Query: 181 MTKKS-SLSKLAKDNDCVITFSTDNFVVKNKQGEILAKGHKKGGLYALD 222
+ S+ K DN C F++ FV+K++ ++A+GHKKG LY L+
Sbjct: 421 LKNNLLSVGKFVSDNHCSFEFTSSGFVIKDQNQRMIARGHKKGQLYTLE 469
BLAST of MC07g_new0035 vs. NCBI nr
Match:
RVW77775.1 (Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera])
HSP 1 Score: 182 bits (461), Expect = 1.16e-48
Identity = 104/251 (41.43%), Postives = 154/251 (61.35%), Query Frame = 0
Query: 1 MDHNQALYSQRGRNKGRGRHFSSIGRGFQQ-GRPHIMQQPDLKQS--------------- 60
++H Q+ ++QRGR + RG F S GRGF GR + D +Q+
Sbjct: 193 INHEQSYFTQRGRGRNRGGRFLSRGRGFTPAGRFNNNATSDQRQNVHSSTRNPRNIFNNQ 252
Query: 61 --PQRLQTE--KTNENSPF-------KAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDL 120
PQ++ T + + N+ F K+EG + CQIC K NH+A++CWNRFD+S+Q E++
Sbjct: 253 FPPQQINTRNPRNSFNNQFPPQQKLQKSEGTLICQICSKANHSALDCWNRFDYSYQSEEI 312
Query: 121 PKALAAFNL-KDTSDQNLYADSGATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHI 180
P+ALAA L ++ D N Y DSGAT+H+ ND K++ V YKG ++I++G+G L ISHI
Sbjct: 313 PQALAAMALHEEEKDPNFYVDSGATAHITNDPSKMSQVIPYKGHDAIFVGNGEALRISHI 372
Query: 181 RHSKLSTDFGNLVLKDVLDVPNMTKKS-SLSKLAKDNDCVITFSTDNFVVKNKQGEILAK 222
++L T +L LK +L VP + K S+ +L DN C I FS+ FV+K++ ++LA+
Sbjct: 373 GEARLKTKHRDLKLKKLLVVPEIKKNLLSIRQLTSDNACSIEFSSTGFVIKDQLQQVLAR 432
BLAST of MC07g_new0035 vs. NCBI nr
Match:
TXG67661.1 (hypothetical protein EZV62_008936 [Acer yangbiense])
HSP 1 Score: 175 bits (444), Expect = 1.27e-46
Identity = 101/246 (41.06%), Postives = 141/246 (57.32%), Query Frame = 0
Query: 1 MDHNQALYSQRGRN-------------KGRGRHFSSIGR-----GFQQGRPHIMQQPDLK 60
++HNQA +SQRGR RG+ F+ GR G Q QP+
Sbjct: 344 IEHNQAFFSQRGRRGRNGRGAGGRVQLNSRGKGFTPAGRYNTQNGGQNSGQQNSNQPNNN 403
Query: 61 QSPQRLQTEKTNE-----NSPFKAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDLPKAL 120
Q+ Q + N+P +G++ CQICGK NH AI+CW RF++S+Q E+ P+ L
Sbjct: 404 LGHQQKQGTTQGQPQWRPNAPNN-DGKIVCQICGKMNHFAIDCWYRFNYSYQSEEFPQDL 463
Query: 121 AAFNLKDTSDQNLYADSGATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKL 180
A L + +D + YADS AT+H+ NDAGKL+S++ Y G + IY+GDGN ISHI + +
Sbjct: 464 ATLTLHNDNDPSFYADSRATTHMTNDAGKLSSIQRYDGNDMIYVGDGNGSPISHIDDAHV 523
Query: 181 STDFGNLVLKDVLDVPNMTKKSS-LSKLAKDNDCVITFSTDNFVVKNKQGEILAKGHKKG 222
+T G L DVL VP + K + K DN C F++ +FVVK++ I+A+GHKKG
Sbjct: 524 TTHEGMFKLNDVLIVPELKKNLLFVGKFTSDNSCTFEFTSSDFVVKDRNQRIIARGHKKG 583
BLAST of MC07g_new0035 vs. ExPASy TrEMBL
Match:
A0A5C7I5Y2 (gag_pre-integrs domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010950 PE=4 SV=1)
HSP 1 Score: 205 bits (521), Expect = 4.10e-58
Identity = 101/165 (61.21%), Postives = 125/165 (75.76%), Query Frame = 0
Query: 60 KAEGRVSCQICGKFNHTAIECWNRFDHSFQLED-LPKALAAFNLKDTSDQNLYADSGATS 119
+ E ++CQICGKFNHTA+ECWNRFDHS+Q ED LPKALAA NLK+ D NLYADSGAT+
Sbjct: 106 QGESTMTCQICGKFNHTALECWNRFDHSYQPEDHLPKALAAMNLKNKDDPNLYADSGATT 165
Query: 120 HVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKLSTDFGNLVLKDVLDVPNMTKK 179
H+LND GKL+ V YKG ++I +G+G L ISHI K+ T G L LK+VL VPN+ K
Sbjct: 166 HILNDPGKLSKVMRYKGNDTILVGNGESLNISHIGEGKIETKDGTLDLKNVLIVPNIKKN 225
Query: 180 S-SLSKLAKDNDCVITFSTDNFVVKNKQGEILAKGHKKGGLYALD 222
S+ +LA DN C I F+ +NF VK++QG+I+AKG K GGLYALD
Sbjct: 226 LISVGQLASDNACTIEFNANNFFVKSQQGKIIAKGRKNGGLYALD 270
BLAST of MC07g_new0035 vs. ExPASy TrEMBL
Match:
A0A438E6Z5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1575 PE=4 SV=1)
HSP 1 Score: 186 bits (471), Expect = 2.99e-50
Identity = 106/251 (42.23%), Postives = 155/251 (61.75%), Query Frame = 0
Query: 1 MDHNQALYSQRGRNKGRGRHFSSIGRGFQQ-GRPHIMQQPDLKQS--------------- 60
++H QA ++QRGR + RG F S GRGF GR + D +Q+
Sbjct: 264 INHEQAYFTQRGRGRNRGGRFLSRGRGFTPAGRFNNNATSDQRQNVYSSTRNPRNSFNNQ 323
Query: 61 --PQRLQTE--KTNENSPF-------KAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDL 120
PQ++ T + + N+ F K+EG + CQIC K NH+A++CWNRFD+ +QLE++
Sbjct: 324 FPPQQISTRNPRNSFNNQFPPQQKLQKSEGTLICQICSKANHSALDCWNRFDYLYQLEEI 383
Query: 121 PKALAAFNL-KDTSDQNLYADSGATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHI 180
P+ALAA L ++ D N Y DSGAT+H+ ND GK++ V YKG ++I++G+G L ISHI
Sbjct: 384 PQALAAMALHEEEKDPNFYVDSGATAHITNDPGKMSQVIPYKGHDAIFVGNGEALRISHI 443
Query: 181 RHSKLSTDFGNLVLKDVLDVPNMTKKS-SLSKLAKDNDCVITFSTDNFVVKNKQGEILAK 222
++L T +L LK +L VP + K S+ +L DN C I FS+ FV+K++ ++LA+
Sbjct: 444 GEARLKTKHRDLKLKKLLVVPEIKKNLLSIGQLTSDNACSIEFSSTGFVIKDQLQQVLAR 503
BLAST of MC07g_new0035 vs. ExPASy TrEMBL
Match:
A0A2K3PEI3 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g010371 PE=4 SV=1)
HSP 1 Score: 183 bits (464), Expect = 1.83e-49
Identity = 101/229 (44.10%), Postives = 139/229 (60.70%), Query Frame = 0
Query: 1 MDHNQALYSQRGRNKGR----GR-HFSSIGRGFQQ-GRPHIMQQPDLKQSPQRLQTEKTN 60
M+H QA +SQR R +GR GR HF+S GRGF GR + Q + R + +
Sbjct: 241 MEHAQAFFSQRARGRGRSARGGRGHFNSQGRGFTPAGRYNRQQNNEFFFKHNRNSKGEKS 300
Query: 61 ENSPFKAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDLPKALAAFNLKDTSDQNLYADS 120
+ E CQIC K NH A++CW R+D+S+Q ED P+A AA L DT DQ+ DS
Sbjct: 301 RPTTQPNESNSDCQICKKPNHEAVDCWYRYDYSYQSEDFPQAFAALALNDTKDQSFIVDS 360
Query: 121 GATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKLSTDFGNLVLKDVLDVPN 180
GATSH++NDAG L+ VK Y+G + IY+GDGN + I+H + + GNL LKDVL VP+
Sbjct: 361 GATSHMINDAGNLSYVKPYRGNDVIYVGDGNSIPITHTGDVNVISTTGNLKLKDVLVVPD 420
Query: 181 MTKKS-SLSKLAKDNDCVITFSTDNFVVKNKQGEILAKGHKKGGLYALD 222
+ S+ K DN C F++ FV+K++ ++A+GHKKG LY L+
Sbjct: 421 LKNNLLSVGKFVSDNHCSFEFTSSGFVIKDQNQRMIARGHKKGQLYTLE 469
BLAST of MC07g_new0035 vs. ExPASy TrEMBL
Match:
A0A438GZV0 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Vitis vinifera OX=29760 GN=RE2_55 PE=4 SV=1)
HSP 1 Score: 182 bits (461), Expect = 5.62e-49
Identity = 104/251 (41.43%), Postives = 154/251 (61.35%), Query Frame = 0
Query: 1 MDHNQALYSQRGRNKGRGRHFSSIGRGFQQ-GRPHIMQQPDLKQS--------------- 60
++H Q+ ++QRGR + RG F S GRGF GR + D +Q+
Sbjct: 193 INHEQSYFTQRGRGRNRGGRFLSRGRGFTPAGRFNNNATSDQRQNVHSSTRNPRNIFNNQ 252
Query: 61 --PQRLQTE--KTNENSPF-------KAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDL 120
PQ++ T + + N+ F K+EG + CQIC K NH+A++CWNRFD+S+Q E++
Sbjct: 253 FPPQQINTRNPRNSFNNQFPPQQKLQKSEGTLICQICSKANHSALDCWNRFDYSYQSEEI 312
Query: 121 PKALAAFNL-KDTSDQNLYADSGATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHI 180
P+ALAA L ++ D N Y DSGAT+H+ ND K++ V YKG ++I++G+G L ISHI
Sbjct: 313 PQALAAMALHEEEKDPNFYVDSGATAHITNDPSKMSQVIPYKGHDAIFVGNGEALRISHI 372
Query: 181 RHSKLSTDFGNLVLKDVLDVPNMTKKS-SLSKLAKDNDCVITFSTDNFVVKNKQGEILAK 222
++L T +L LK +L VP + K S+ +L DN C I FS+ FV+K++ ++LA+
Sbjct: 373 GEARLKTKHRDLKLKKLLVVPEIKKNLLSIRQLTSDNACSIEFSSTGFVIKDQLQQVLAR 432
BLAST of MC07g_new0035 vs. ExPASy TrEMBL
Match:
A0A5C7IEW8 (LRRNT_2 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008936 PE=4 SV=1)
HSP 1 Score: 175 bits (444), Expect = 6.14e-47
Identity = 101/246 (41.06%), Postives = 141/246 (57.32%), Query Frame = 0
Query: 1 MDHNQALYSQRGRN-------------KGRGRHFSSIGR-----GFQQGRPHIMQQPDLK 60
++HNQA +SQRGR RG+ F+ GR G Q QP+
Sbjct: 344 IEHNQAFFSQRGRRGRNGRGAGGRVQLNSRGKGFTPAGRYNTQNGGQNSGQQNSNQPNNN 403
Query: 61 QSPQRLQTEKTNE-----NSPFKAEGRVSCQICGKFNHTAIECWNRFDHSFQLEDLPKAL 120
Q+ Q + N+P +G++ CQICGK NH AI+CW RF++S+Q E+ P+ L
Sbjct: 404 LGHQQKQGTTQGQPQWRPNAPNN-DGKIVCQICGKMNHFAIDCWYRFNYSYQSEEFPQDL 463
Query: 121 AAFNLKDTSDQNLYADSGATSHVLNDAGKLASVKTYKGKESIYIGDGNVLEISHIRHSKL 180
A L + +D + YADS AT+H+ NDAGKL+S++ Y G + IY+GDGN ISHI + +
Sbjct: 464 ATLTLHNDNDPSFYADSRATTHMTNDAGKLSSIQRYDGNDMIYVGDGNGSPISHIDDAHV 523
Query: 181 STDFGNLVLKDVLDVPNMTKKSS-LSKLAKDNDCVITFSTDNFVVKNKQGEILAKGHKKG 222
+T G L DVL VP + K + K DN C F++ +FVVK++ I+A+GHKKG
Sbjct: 524 TTHEGMFKLNDVLIVPELKKNLLFVGKFTSDNSCTFEFTSSDFVVKDRNQRIIARGHKKG 583
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94HW2 | 1.1e-10 | 29.94 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 3.4e-09 | 31.74 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
TXG63956.1 | 8.48e-58 | 61.21 | hypothetical protein EZV62_010950 [Acer yangbiense] | [more] |
RVW43526.1 | 6.17e-50 | 42.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
PNY13708.1 | 3.77e-49 | 44.10 | hypothetical protein L195_g010371 [Trifolium pratense] | [more] |
RVW77775.1 | 1.16e-48 | 41.43 | Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera] | [more] |
TXG67661.1 | 1.27e-46 | 41.06 | hypothetical protein EZV62_008936 [Acer yangbiense] | [more] |
Match Name | E-value | Identity | Description | |
A0A5C7I5Y2 | 4.10e-58 | 61.21 | gag_pre-integrs domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62... | [more] |
A0A438E6Z5 | 2.99e-50 | 42.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A2K3PEI3 | 1.83e-49 | 44.10 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Trifolium prat... | [more] |
A0A438GZV0 | 5.62e-49 | 41.43 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Vitis vinifera OX=2976... | [more] |
A0A5C7IEW8 | 6.14e-47 | 41.06 | LRRNT_2 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008936 ... | [more] |
Match Name | E-value | Identity | Description | |