MC07g_new0033 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0033
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Natterin-3 like
Location	MC07: 1388772 .. 1390796 (-)
RNA-Seq Expression	MC07g_new0033
Synteny	MC07g_new0033

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTACAATTATGAAGGCTGATGATGAAATTTATGCACTCTCAACACTCGTTGATTGGGACTCCCTCTTTATACTTCCAAAACATGTGGCCTTCAAGGGAGATAATGGCCAATATTTGAGCTTTTCTAGTCCATACTTGAAGTTTTCGAACTCGGATGTTAAAGACTCATCAGTTGTGCAAGAGATCTTTCCTACAAAAGATGGTAATATTCGTATAAAGAATGACGACTCGGGTAAGTTTTGGTATCGTGATCCTAACTGGATATGCGCCACATCGACCGTCAAGAGCGACAATCCCAACAACTTATTTTGGCCCGTCAAAATCGACAACCAAAACCTGGCTCTTCGCAACTTAGGTAATGTAATATTTTTTTTTGTATATTCTTAATTATCAGCGAACCAATGTTGACTCTCTCTTACCTCCGATCTTCTGGTGAATGATATGTGTGTTAACCATGAATGAATTACATTACATTTATTCTTTATAGGTAATAATCATTTCTGCCAGAGACTGACCATCGAGGGAAAAACGAGTTGTCTCAATGCTGGTGCGGTTACTATTACCAAAGAATCGCGCATGGAAGTGGTAGAGATTGTAATTTCGAGGACCATTGATAACGTGGAGTATCGACTTAACGATGCTCGAATTTACGGTCAAAAGGTGGTGTCAATGGCGAAAGGAACTGCTGTCAACAAAACAAAAGAAACTGACATAGTAACTTTTCAATTCAAGTACGAGGAAAAAAATAAGAAAAACTGGAGTTCCTCTGTCTCGTCCAAGATTGGTGTGAGTGTGACTACAAACTTTCAAGTTGGGGTTCCTATGGTTGCAAAAGGGAAGATTGAAGTTTCAGCTGAGATGGAGACTGAATATGAATGGGGAGAAACCCATAAGAATAAAAATGTGAAGGAATTTACTTACCCTGTAATTGTTCCTCCAATGTCAAAAGTGAAGATTCATGCTGTCATAAAGCAAGGCATGTGCCAAGTTCCTTTCTCCTACCACCGCGAACCGATGTTCTTAGGACGGGACAACAAGTCGTTCATCATTTACATGATGGACTTCTCACTGGTGTAAACTCTTACGACTTCGAGTTCAAGTCTGAAACTGTAGCAATGACATCATAAAATTATTTGAGGGACTGGAACAATGTGTGACTAGTAATTCGATACTATTCGAACTTCTTCGAATAGTTATTAGGAAGAAATCACATTTGGACCGCCCCTTGAATAATTTTGTGTGAGAAAGGGTAATTATCTAAGTTGTTCGGAGTGAATTAAGGATTGAATTTCGGTTTCTAGTTGATGTTGTTTGCTTTGTCATTAAAAATAATGGTGTAAAACCAGCTTGTGTTGTGGTATGTTTGTATTTTCGTACCTTTTTAAGTGTAATTACTAATGTGTTATGAAATTCTCTTTGATTTTTTTCTTTTTTTTTTTTAATAAAAGATACCGAAACTATTTCATTCAAGAGAGTAGAGAGTAGATGAGAAACGTACCAAGTAAACAAAGGAAAGCGAGAGTATGTGAGAAAAATTATCTGAAATTATCTTTGGTTGAAAATCACATCTCCTCTCTTTGTAACATCCTCGTGTTTGCACATTTTCTTTGTCTAATTAAATCTGAGTTTAATTTCTTGGTTTATAAGTTTGAGAGAGTAGAAAGAATGTAATTCTTTCTGTTCAATAAAAAATTGATAGGATTTTACAGAAAATAACATTCAGAGCTAATTTTTATAGTGTAATTCATGAGTTTTTGCCAAGTTATTTAATGGGTTCATTTTGTTCCTTCATCAAACTTAATTAAAACTTGATTTCTGTTGGAGGTTGGCATGCTATGGTTGATGGTTCAACAGGTACACGTGTCGCCTCACGCGAGTGTGTTTACCTCGGTCAGGAACCCTCATGTCGAGTCGACCATATTTGGTGGTCGAGCCGACCAAACCTATTACTTGGACTACTTCGACTTAACCTATTTTCCGACAGACTCCGCAACATCACGCCACACTTCACAGCATCTTTAA

mRNA sequence

ATGGTTACAATTATGAAGGCTGATGATGAAATTTATGCACTCTCAACACTCGTTGATTGGGACTCCCTCTTTATACTTCCAAAACATGTGGCCTTCAAGGGAGATAATGGCCAATATTTGAGCTTTTCTAGTCCATACTTGAAGTTTTCGAACTCGGATGTTAAAGACTCATCAGTTGTGCAAGAGATCTTTCCTACAAAAGATGGTAATATTCGTATAAAGAATGACGACTCGGGTAAGTTTTGGTATCGTGATCCTAACTGGATATGCGCCACATCGACCGTCAAGAGCGACAATCCCAACAACTTATTTTGGCCCGTCAAAATCGACAACCAAAACCTGGCTCTTCGCAACTTAGTTGATGTTGTTTGCTTTGTCATTAAAAATAATGGTGTAAAACCAGCTTGTGTTGTGGTACACGTGTCGCCTCACGCGAGTGTGTTTACCTCGGTCAGGAACCCTCATGTCGAGTCGACCATATTTGGTGGTCGAGCCGACCAAACCTATTACTTGGACTACTTCGACTTAACCTATTTTCCGACAGACTCCGCAACATCACGCCACACTTCACAGCATCTTTAA

Coding sequence (CDS)

ATGGTTACAATTATGAAGGCTGATGATGAAATTTATGCACTCTCAACACTCGTTGATTGGGACTCCCTCTTTATACTTCCAAAACATGTGGCCTTCAAGGGAGATAATGGCCAATATTTGAGCTTTTCTAGTCCATACTTGAAGTTTTCGAACTCGGATGTTAAAGACTCATCAGTTGTGCAAGAGATCTTTCCTACAAAAGATGGTAATATTCGTATAAAGAATGACGACTCGGGTAAGTTTTGGTATCGTGATCCTAACTGGATATGCGCCACATCGACCGTCAAGAGCGACAATCCCAACAACTTATTTTGGCCCGTCAAAATCGACAACCAAAACCTGGCTCTTCGCAACTTAGTTGATGTTGTTTGCTTTGTCATTAAAAATAATGGTGTAAAACCAGCTTGTGTTGTGGTACACGTGTCGCCTCACGCGAGTGTGTTTACCTCGGTCAGGAACCCTCATGTCGAGTCGACCATATTTGGTGGTCGAGCCGACCAAACCTATTACTTGGACTACTTCGACTTAACCTATTTTCCGACAGACTCCGCAACATCACGCCACACTTCACAGCATCTTTAA

Protein sequence

MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVVQEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVKSDNPNNLFWPVKIDNQNLALRNLVDVVCFVIKNNGVKPACVVVHVSPHASVFTSVRNPHVESTIFGGRADQTYYLDYFDLTYFPTDSATSRHTSQHL

Homology

[Close]

BLAST of MC07g_new0033 vs. NCBI nr
Match: XP_022157628.1 (uncharacterized protein LOC111024289 [Momordica charantia])

HSP 1 Score: 249 bits (637), Expect = 3.52e-79
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVV 60
           MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVV
Sbjct: 29  MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVV 88

Query: 61  QEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVKSDNPNNLFWPVKIDNQNLALRNL 119
           QEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVKSDNPNNLFWPVKIDNQNLALRNL
Sbjct: 89  QEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVKSDNPNNLFWPVKIDNQNLALRNL 147

[Close]

BLAST of MC07g_new0033 vs. NCBI nr
Match: XP_022157622.1 (uncharacterized protein LOC111024282 [Momordica charantia])

HSP 1 Score: 208 bits (530), Expect = 3.43e-61
Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 6   KADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVVQEIFP 65
           KADD+IYALST+VDWDS+FILPKHVAFKGDNGQYLSFSSPYLKFS+S + DSSVVQEIFP
Sbjct: 188 KADDDIYALSTIVDWDSIFILPKHVAFKGDNGQYLSFSSPYLKFSSSSITDSSVVQEIFP 247

Query: 66  TKDGNIRIKNDDSGKFWYRDPNWICATSTV-KSDNPNNLFWPVKIDNQNLALRNL 119
           TKDGNIRIKND+SG+FWYRDPNWI ATST  KS+NPNNLFWP KID++ LALRNL
Sbjct: 248 TKDGNIRIKNDESGRFWYRDPNWIWATSTNGKSNNPNNLFWPAKIDDETLALRNL 302

[Close]

BLAST of MC07g_new0033 vs. NCBI nr
Match: XP_022157620.1 (uncharacterized protein LOC111024281 isoform X1 [Momordica charantia])

HSP 1 Score: 153 bits (386), Expect = 1.54e-40
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1   MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVV 60
           MVTI KADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFS+SDVK+SSVV
Sbjct: 191 MVTIRKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSSSDVKESSVV 250

Query: 61  QEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVK 96
           QEIFPTKDGNI IKNDDSG       N  C   T++
Sbjct: 251 QEIFPTKDGNIPIKNDDSGN------NHFCQRLTIE 280

[Close]

BLAST of MC07g_new0033 vs. NCBI nr
Match: XP_022155413.1 (uncharacterized protein LOC111022561 [Momordica charantia])

HSP 1 Score: 153 bits (386), Expect = 3.68e-40
Identity = 70/113 (61.95%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 8   DDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVVQEIFPTK 67
           +D   +L  +VDWDS++ILP+HVAFKG+NG+YL F  P L+FS+SD+KDSSV  EIFPTK
Sbjct: 178 NDPKVSLFPIVDWDSIYILPRHVAFKGNNGKYLKFIGPKLQFSSSDIKDSSVAHEIFPTK 237

Query: 68  DGNIRIKNDDSGKFWYRDPNWICATST-VKSDNPNNLFWPVKIDNQNLALRNL 119
           DGNI I++D+SGKFW RDP+WI A S    S++PN LFWPVK+++  +ALRNL
Sbjct: 238 DGNIHIRHDESGKFWIRDPDWIHAQSNDANSNDPNTLFWPVKVEDDVVALRNL 290

[Close]

BLAST of MC07g_new0033 vs. NCBI nr
Match: XP_022157625.1 (uncharacterized protein LOC111024286 [Momordica charantia])

HSP 1 Score: 139 bits (350), Expect = 3.99e-35
Identity = 70/115 (60.87%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 9   DEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSP---YLKFSNSDVKDSSVVQEIFP 68
           DE Y  +T+VDW +LFILPKHVAFKGDNG+YL   S    YL+FS SDV D++V  +IF 
Sbjct: 155 DESYQ-TTVVDWSTLFILPKHVAFKGDNGKYLKVHSSGTRYLEFSGSDVADAAVGNQIFI 214

Query: 69  TKDGNIRIKNDDSGKFWYRDPNWICATSTVKS-DNPNNLFWPVKIDNQN-LALRN 118
           T DG++RIKNDD+GKFW RDPNWI A +T +  D+PN LFWPV++ ++N +ALRN
Sbjct: 215 TSDGHVRIKNDDNGKFWIRDPNWIHAKATERDFDDPNTLFWPVRVGSRNSVALRN 268

[Close]

BLAST of MC07g_new0033 vs. ExPASy TrEMBL
Match: A0A6J1DTV1 (uncharacterized protein LOC111024289 OS=Momordica charantia OX=3673 GN=LOC111024289 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 1.70e-79
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVV 60
           MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVV
Sbjct: 29  MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVV 88

Query: 61  QEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVKSDNPNNLFWPVKIDNQNLALRNL 119
           QEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVKSDNPNNLFWPVKIDNQNLALRNL
Sbjct: 89  QEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVKSDNPNNLFWPVKIDNQNLALRNL 147

[Close]

BLAST of MC07g_new0033 vs. ExPASy TrEMBL
Match: A0A6J1DUY9 (uncharacterized protein LOC111024282 OS=Momordica charantia OX=3673 GN=LOC111024282 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 1.66e-61
Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 6   KADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVVQEIFP 65
           KADD+IYALST+VDWDS+FILPKHVAFKGDNGQYLSFSSPYLKFS+S + DSSVVQEIFP
Sbjct: 188 KADDDIYALSTIVDWDSIFILPKHVAFKGDNGQYLSFSSPYLKFSSSSITDSSVVQEIFP 247

Query: 66  TKDGNIRIKNDDSGKFWYRDPNWICATSTV-KSDNPNNLFWPVKIDNQNLALRNL 119
           TKDGNIRIKND+SG+FWYRDPNWI ATST  KS+NPNNLFWP KID++ LALRNL
Sbjct: 248 TKDGNIRIKNDESGRFWYRDPNWIWATSTNGKSNNPNNLFWPAKIDDETLALRNL 302

[Close]

BLAST of MC07g_new0033 vs. ExPASy TrEMBL
Match: A0A6J1DTL3 (uncharacterized protein LOC111024281 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024281 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 7.47e-41
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1   MVTIMKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVV 60
           MVTI KADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFS+SDVK+SSVV
Sbjct: 191 MVTIRKADDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSSSDVKESSVV 250

Query: 61  QEIFPTKDGNIRIKNDDSGKFWYRDPNWICATSTVK 96
           QEIFPTKDGNI IKNDDSG       N  C   T++
Sbjct: 251 QEIFPTKDGNIPIKNDDSGN------NHFCQRLTIE 280

[Close]

BLAST of MC07g_new0033 vs. ExPASy TrEMBL
Match: A0A6J1DMW2 (uncharacterized protein LOC111022561 OS=Momordica charantia OX=3673 GN=LOC111022561 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 1.78e-40
Identity = 70/113 (61.95%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 8   DDEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSPYLKFSNSDVKDSSVVQEIFPTK 67
           +D   +L  +VDWDS++ILP+HVAFKG+NG+YL F  P L+FS+SD+KDSSV  EIFPTK
Sbjct: 178 NDPKVSLFPIVDWDSIYILPRHVAFKGNNGKYLKFIGPKLQFSSSDIKDSSVAHEIFPTK 237

Query: 68  DGNIRIKNDDSGKFWYRDPNWICATST-VKSDNPNNLFWPVKIDNQNLALRNL 119
           DGNI I++D+SGKFW RDP+WI A S    S++PN LFWPVK+++  +ALRNL
Sbjct: 238 DGNIHIRHDESGKFWIRDPDWIHAQSNDANSNDPNTLFWPVKVEDDVVALRNL 290

[Close]

BLAST of MC07g_new0033 vs. ExPASy TrEMBL
Match: A0A6J1DTL6 (uncharacterized protein LOC111024286 OS=Momordica charantia OX=3673 GN=LOC111024286 PE=3 SV=1)

HSP 1 Score: 139 bits (350), Expect = 1.93e-35
Identity = 70/115 (60.87%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 9   DEIYALSTLVDWDSLFILPKHVAFKGDNGQYLSFSSP---YLKFSNSDVKDSSVVQEIFP 68
           DE Y  +T+VDW +LFILPKHVAFKGDNG+YL   S    YL+FS SDV D++V  +IF 
Sbjct: 155 DESYQ-TTVVDWSTLFILPKHVAFKGDNGKYLKVHSSGTRYLEFSGSDVADAAVGNQIFI 214

Query: 69  TKDGNIRIKNDDSGKFWYRDPNWICATSTVKS-DNPNNLFWPVKIDNQN-LALRN 118
           T DG++RIKNDD+GKFW RDPNWI A +T +  D+PN LFWPV++ ++N +ALRN
Sbjct: 215 TSDGHVRIKNDDNGKFWIRDPNWIHAKATERDFDDPNTLFWPVRVGSRNSVALRN 268

The following BLAST results are available for this feature:

BLAST of MC07g_new0033 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0033 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157628.1	3.52e-79	100.00	uncharacterized protein LOC111024289 [Momordica charantia]	[more]
XP_022157622.1	3.43e-61	85.22	uncharacterized protein LOC111024282 [Momordica charantia]	[more]
XP_022157620.1	1.54e-40	81.25	uncharacterized protein LOC111024281 isoform X1 [Momordica charantia]	[more]
XP_022155413.1	3.68e-40	61.95	uncharacterized protein LOC111022561 [Momordica charantia]	[more]
XP_022157625.1	3.99e-35	60.87	uncharacterized protein LOC111024286 [Momordica charantia]	[more]

BLAST of MC07g_new0033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTV1	1.70e-79	100.00	uncharacterized protein LOC111024289 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DUY9	1.66e-61	85.22	uncharacterized protein LOC111024282 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DTL3	7.47e-41	81.25	uncharacterized protein LOC111024281 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DMW2	1.78e-40	61.95	uncharacterized protein LOC111022561 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DTL6	1.93e-35	60.87	uncharacterized protein LOC111024286 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of MC07g_new0033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008998	Agglutinin domain	SMART	SM00791	agglutinin	coord: 24..158 e-value: 3.9E-8 score: 43.0
IPR008998	Agglutinin domain	PFAM	PF07468	Agglutinin	coord: 28..122 e-value: 3.4E-9 score: 37.1
None	No IPR available	GENE3D	2.80.10.50		coord: 26..147 e-value: 2.0E-27 score: 97.8
None	No IPR available	PANTHER	PTHR39244:SF5	NATTERIN-4	coord: 5..120
None	No IPR available	PANTHER	PTHR39244	NATTERIN-4	coord: 5..120
IPR036242	Agglutinin domain superfamily	SUPERFAMILY	50382	Agglutinin	coord: 20..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g_new0033.1	MC07g_new0033.1	mRNA