MC07g0488 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0488
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	agamous-like MADS-box protein AGL62
Location	MC07: 12902306 .. 12902785 (-)
RNA-Seq Expression	MC07g0488
Synteny	MC07g0488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAACTCAAGGCCGACAGAAGATCGAAATCAAGAAACTGGAGAAGAAGAGCAGCAAGCAAGTGACGTTTTCGAAGCGCCGGACCGGACTTTTCAAGAAGGCCAGCGAGCTCTCTGTTCTGTGCGGGGCGGAGGTGGCGATCATCGTTTTTTCTCCCAACGATAAGGTTTTTTGCTTCGGTCATCCGAATGTGGATTTGCTTTTGGATCGGTTTCTGACGGGGAATTCGGCGCCGCCGAAGCCGGCGGAGAGTTATGTGCCGGTGGCGCAGTTGAATCGCGAATTTGCCGATGCGGTGAGGGAATTGGAGGCGGAAAAGCGGCGGGCGGCGGAGGTGATTAGGGCTGCGGAGGAGTGGAGGAGCGGCGGCGGATTCTGGTGGGAGGAGGAGATTGAAGGGATGAGAGTGGAGGAATTGAAGGAGTTCCGGTCGGCGTTGCAGGATTTGAGAGCAAAAGTGGCGGAGAGAGTGGAGAAA

mRNA sequence

AAGAAAACTCAAGGCCGACAGAAGATCGAAATCAAGAAACTGGAGAAGAAGAGCAGCAAGCAAGTGACGTTTTCGAAGCGCCGGACCGGACTTTTCAAGAAGGCCAGCGAGCTCTCTGTTCTGTGCGGGGCGGAGGTGGCGATCATCGTTTTTTCTCCCAACGATAAGGTTTTTTGCTTCGGTCATCCGAATGTGGATTTGCTTTTGGATCGGTTTCTGACGGGGAATTCGGCGCCGCCGAAGCCGGCGGAGAGTTATGTGCCGGTGGCGCAGTTGAATCGCGAATTTGCCGATGCGGTGAGGGAATTGGAGGCGGAAAAGCGGCGGGCGGCGGAGGTGATTAGGGCTGCGGAGGAGTGGAGGAGCGGCGGCGGATTCTGGTGGGAGGAGGAGATTGAAGGGATGAGAGTGGAGGAATTGAAGGAGTTCCGGTCGGCGTTGCAGGATTTGAGAGCAAAAGTGGCGGAGAGAGTGGAGAAA

Coding sequence (CDS)

AAGAAAACTCAAGGCCGACAGAAGATCGAAATCAAGAAACTGGAGAAGAAGAGCAGCAAGCAAGTGACGTTTTCGAAGCGCCGGACCGGACTTTTCAAGAAGGCCAGCGAGCTCTCTGTTCTGTGCGGGGCGGAGGTGGCGATCATCGTTTTTTCTCCCAACGATAAGGTTTTTTGCTTCGGTCATCCGAATGTGGATTTGCTTTTGGATCGGTTTCTGACGGGGAATTCGGCGCCGCCGAAGCCGGCGGAGAGTTATGTGCCGGTGGCGCAGTTGAATCGCGAATTTGCCGATGCGGTGAGGGAATTGGAGGCGGAAAAGCGGCGGGCGGCGGAGGTGATTAGGGCTGCGGAGGAGTGGAGGAGCGGCGGCGGATTCTGGTGGGAGGAGGAGATTGAAGGGATGAGAGTGGAGGAATTGAAGGAGTTCCGGTCGGCGTTGCAGGATTTGAGAGCAAAAGTGGCGGAGAGAGTGGAGAAA

Protein sequence

KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCFGHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK

Homology

[Close]

BLAST of MC07g0488 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-30
Identity = 74/162 (45.68%), Postives = 106/162 (65.43%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KK++GRQKIE+ K++ +S+ QVTFSKRR+GLFKKASEL  LCGAEVAI+VFSP  KVF F
Sbjct: 3   KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62

Query: 61  GHPNVDLLLDRFLTGNSAPP--------KPAESYVPVAQLNREFADAVRELEAEKRRAAE 120
           GHPNVD ++DRF+  N  PP        +       V  LN      + +LE EK++  E
Sbjct: 63  GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDE 122

Query: 121 VIRAAEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKV 155
           + +  E+ ++ G  WWE+ +E + + +L+ F+  L++L+  V
Sbjct: 123 LKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVV 163

[Close]

BLAST of MC07g0488 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 72/160 (45.00%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           K++ GRQKI + K++K+S +QVTFSKRR GLFKKASEL  LCGAE+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAE----SYVPVAQLNREFADAVRELEAEKRR--AAEVI 120
           GHP+V+ +LDR+++ N+     ++    S     +LN +    + E+E EK++  A E +
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 121 RAAEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKV 155
           R  E  R     WWE+ +E M + +L+E + AL++LR  V
Sbjct: 179 R-KESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of MC07g0488 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.7e-21
Identity = 62/159 (38.99%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 5   GRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCFGHPN 64
           GR+KI+++ ++  +++QVTFSKRRTGLFKKASEL+ LC AE+ I+VFSP  K F +G PN
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 65  VDLLLDRFL----TGNSAPPKPAESYVPVAQLNREFADAV-RELEAEKRRAAEVIRAAEE 124
           +D + +RF+      +S   + + +Y P  +   E  D + +E+EAEK R     ++ E+
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGE---KSQEK 121

Query: 125 WRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERV 159
             S G   ++E IE + ++EL E++  LQ +  ++  +V
Sbjct: 122 LESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQV 157

[Close]

BLAST of MC07g0488 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GR+K+EI K+ K+S+ QVTFSKR+ GLFKKASE   LC A++A+IVFSP  KVF F
Sbjct: 3   KKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSF 62

Query: 61  GHPNVDLLLDRF----LTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRA 120
           GHPNVD+LLD F    +  N+     + + + V  LN+ + +   E+E E++      + 
Sbjct: 63  GHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQN 122

Query: 121 AEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAER 158
             E       WW +    + + +       L+DL+  V E+
Sbjct: 123 ERE-NENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEK 162

[Close]

BLAST of MC07g0488 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-20
Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           +K  GR+KIE+ K+  +S+ QVTFSKRR+GLFKK SEL  LC AE+AIIVFSP+ K + F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 61  GHPNVDLLLD----RFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRA 120
           GHPNV+ LLD    R +  N+     + + + +  LN    + + E E E+     +++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 121 AEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERV 159
             E       WW      + + +    +  L+ L+ +V E+V
Sbjct: 123 ERE-NKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKV 163

[Close]

BLAST of MC07g0488 vs. NCBI nr
Match: XP_022155748.1 (agamous-like MADS-box protein AGL62 [Momordica charantia])

HSP 1 Score: 303 bits (777), Expect = 1.35e-102
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 2   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 61

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW
Sbjct: 62  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 121

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK
Sbjct: 122 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 161

[Close]

BLAST of MC07g0488 vs. NCBI nr
Match: XP_023006252.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 258 bits (658), Expect = 9.96e-85
Identity = 133/160 (83.12%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHPNVD+LLDR+LTGN +PPKPAESYVPVA+ NR+FAD V E EAEK+RA E+I+A+EE 
Sbjct: 74  GHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEES 133

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           R+ GGFWWEE +EGMR+EELKEFRS+L DLRAKVAE+VEK
Sbjct: 134 RNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEK 173

[Close]

BLAST of MC07g0488 vs. NCBI nr
Match: XP_023549141.1 (agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256 bits (653), Expect = 4.11e-84
Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 2   KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 61

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHP+VD+LLDR+LTGN +PPKPAESYVPVA+ NR+FAD V E EAEK+RA E+I+A+EE 
Sbjct: 62  GHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEES 121

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           R+ GGFWWEE +EGMR+EELKEFRS+L DLRAKVAE+VEK
Sbjct: 122 RNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEK 161

[Close]

BLAST of MC07g0488 vs. NCBI nr
Match: KAG6574839.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256 bits (653), Expect = 6.14e-84
Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHP+VD+LLDR+LTGN +PPKPAESYVPVA+ NR+FAD V E EAEK+RA E+I+A+EE 
Sbjct: 74  GHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEES 133

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           R+ GGFWWEE +EGMR+EELKEFRS+L DLRAKVAE+VEK
Sbjct: 134 RNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEK 173

[Close]

BLAST of MC07g0488 vs. NCBI nr
Match: XP_022959356.1 (agamous-like MADS-box protein AGL62 [Cucurbita moschata])

HSP 1 Score: 256 bits (653), Expect = 6.14e-84
Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHP+VD+LLDR+LTGN +PPKPAESYVPVA+ NR+FAD V E EAEK+RA E+I+A+EE 
Sbjct: 74  GHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEES 133

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           R+ GGFWWEE +EGMR+EELKEFRS+L DLRAKVAE+VEK
Sbjct: 134 RNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEK 173

[Close]

BLAST of MC07g0488 vs. ExPASy TrEMBL
Match: A0A6J1DNR9 (agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC111022795 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 6.55e-103
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 2   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 61

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW
Sbjct: 62  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 121

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK
Sbjct: 122 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 161

[Close]

BLAST of MC07g0488 vs. ExPASy TrEMBL
Match: A0A6J1KVC9 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 PE=4 SV=1)

HSP 1 Score: 258 bits (658), Expect = 4.82e-85
Identity = 133/160 (83.12%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHPNVD+LLDR+LTGN +PPKPAESYVPVA+ NR+FAD V E EAEK+RA E+I+A+EE 
Sbjct: 74  GHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEES 133

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           R+ GGFWWEE +EGMR+EELKEFRS+L DLRAKVAE+VEK
Sbjct: 134 RNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEK 173

[Close]

BLAST of MC07g0488 vs. ExPASy TrEMBL
Match: A0A6J1H4M6 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111460353 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 2.97e-84
Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHP+VD+LLDR+LTGN +PPKPAESYVPVA+ NR+FAD V E EAEK+RA E+I+A+EE 
Sbjct: 74  GHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEES 133

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           R+ GGFWWEE +EGMR+EELKEFRS+L DLRAKVAE+VEK
Sbjct: 134 RNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEK 173

[Close]

BLAST of MC07g0488 vs. ExPASy TrEMBL
Match: A0A5D3D807 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001020 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 7.83e-84
Identity = 132/160 (82.50%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCGAEVAIIVFSPNDKVFCF
Sbjct: 2   KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 61

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHP+VD+LLDR+LTGN +PPKPAESY+PVA+ NR+FAD   E EAEK+RAAE+IRAAE+ 
Sbjct: 62  GHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAEDS 121

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           R  GGFWW+E  EGMR+EELK+FRSAL DLRAKVAERVEK
Sbjct: 122 RKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEK 161

[Close]

BLAST of MC07g0488 vs. ExPASy TrEMBL
Match: A0A0A0LE01 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 8.09e-84
Identity = 130/160 (81.25%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCGAEVAIIVFSPNDK+FCF
Sbjct: 10  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCF 69

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 120
           GHP+VD+LLDR+LTGN +PPKPAESY+PVA+ NR+FAD   E EAEK+RAAE+IRAAE+ 
Sbjct: 70  GHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAEDS 129

Query: 121 RSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 160
           R  GGFWW+E +EG+R+EELK+FRSAL DLRAKVAERVEK
Sbjct: 130 RKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEK 169

[Close]

BLAST of MC07g0488 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 133.3 bits (334), Expect = 1.8e-31
Identity = 74/162 (45.68%), Postives = 106/162 (65.43%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KK++GRQKIE+ K++ +S+ QVTFSKRR+GLFKKASEL  LCGAEVAI+VFSP  KVF F
Sbjct: 3   KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62

Query: 61  GHPNVDLLLDRFLTGNSAPP--------KPAESYVPVAQLNREFADAVRELEAEKRRAAE 120
           GHPNVD ++DRF+  N  PP        +       V  LN      + +LE EK++  E
Sbjct: 63  GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDE 122

Query: 121 VIRAAEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKV 155
           + +  E+ ++ G  WWE+ +E + + +L+ F+  L++L+  V
Sbjct: 123 LKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVV 163

[Close]

BLAST of MC07g0488 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26
Identity = 72/160 (45.00%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           K++ GRQKI + K++K+S +QVTFSKRR GLFKKASEL  LCGAE+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 61  GHPNVDLLLDRFLTGNSAPPKPAE----SYVPVAQLNREFADAVRELEAEKRR--AAEVI 120
           GHP+V+ +LDR+++ N+     ++    S     +LN +    + E+E EK++  A E +
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 121 RAAEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKV 155
           R  E  R     WWE+ +E M + +L+E + AL++LR  V
Sbjct: 179 R-KESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of MC07g0488 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23
Identity = 69/171 (40.35%), Postives = 102/171 (59.65%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           + T+GRQKIE+KK+E +S+ QVTFSKRR GLFKKASEL  L GAE+ +IVFSP  KVF F
Sbjct: 3   RSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSF 62

Query: 61  GHPNVDLLLDRFL--TGNSAPPKPAESYVPVAQ---------LNREFADAVRELEAEKRR 120
           GHP+V  L+ RF     NSA      + + + +         LN    + +   E EK++
Sbjct: 63  GHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQK 122

Query: 121 AAEVIRAAEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERVEK 161
              V+   +E R   G W+E++++ + + E  +  SALQD++ K+   + +
Sbjct: 123 RM-VLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQ 172

[Close]

BLAST of MC07g0488 vs. TAIR 10
Match: AT2G34440.1 (AGAMOUS-like 29 )

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-22
Identity = 62/159 (38.99%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 5   GRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCFGHPN 64
           GR+KI+++ ++  +++QVTFSKRRTGLFKKASEL+ LC AE+ I+VFSP  K F +G PN
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 65  VDLLLDRFL----TGNSAPPKPAESYVPVAQLNREFADAV-RELEAEKRRAAEVIRAAEE 124
           +D + +RF+      +S   + + +Y P  +   E  D + +E+EAEK R     ++ E+
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGE---KSQEK 121

Query: 125 WRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAERV 159
             S G   ++E IE + ++EL E++  LQ +  ++  +V
Sbjct: 122 LESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQV 157

[Close]

BLAST of MC07g0488 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 101.3 bits (251), Expect = 7.5e-22
Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 1   KKTQGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 60
           KKT GR+K+EI K+ K+S+ QVTFSKR+ GLFKKASE   LC A++A+IVFSP  KVF F
Sbjct: 3   KKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSF 62

Query: 61  GHPNVDLLLDRF----LTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRA 120
           GHPNVD+LLD F    +  N+     + + + V  LN+ + +   E+E E++      + 
Sbjct: 63  GHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQN 122

Query: 121 AEEWRSGGGFWWEEEIEGMRVEELKEFRSALQDLRAKVAER 158
             E       WW +    + + +       L+DL+  V E+
Sbjct: 123 ERE-NENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEK 162

The following BLAST results are available for this feature:

BLAST of MC07g0488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	2.5e-30	45.68	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	1.8e-25	45.00	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O64703	4.7e-21	38.99	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]
O80807	1.0e-20	39.75	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9LMM8	5.2e-20	37.04	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]

BLAST of MC07g0488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155748.1	1.35e-102	100.00	agamous-like MADS-box protein AGL62 [Momordica charantia]	[more]
XP_023006252.1	9.96e-85	83.13	agamous-like MADS-box protein AGL62 [Cucurbita maxima]	[more]
XP_023549141.1	4.11e-84	82.50	agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]	[more]
KAG6574839.1	6.14e-84	82.50	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022959356.1	6.14e-84	82.50	agamous-like MADS-box protein AGL62 [Cucurbita moschata]	[more]

BLAST of MC07g0488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNR9	6.55e-103	100.00	agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC1110227...	[more]
A0A6J1KVC9	4.82e-85	83.13	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 ...	[more]
A0A6J1H4M6	2.97e-84	82.50	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11146035...	[more]
A0A5D3D807	7.83e-84	82.50	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0LE01	8.09e-84	81.25	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE...	[more]

BLAST of MC07g0488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	1.8e-31	45.68	AGAMOUS-like 62	[more]
AT2G24840.1	1.3e-26	45.00	AGAMOUS-like 61	[more]
AT4G36590.1	2.3e-23	40.35	MADS-box transcription factor family protein	[more]
AT2G34440.1	3.3e-22	38.99	AGAMOUS-like 29	[more]
AT1G65360.1	7.5e-22	39.75	AGAMOUS-like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..160
None	No IPR available	COILS	Coil	Coil	coord: 89..120
None	No IPR available	PANTHER	PTHR11945:SF665	AGAMOUS-LIKE MADS-BOX PROTEIN AGL62	coord: 4..157
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 4..157
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 6..26 score: 51.12 coord: 41..62 score: 44.01 coord: 26..41 score: 77.12
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 4..63 e-value: 3.9E-33 score: 126.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 14..60 e-value: 1.2E-24 score: 85.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 6..60
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 4..64 score: 27.039003
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 16..81 e-value: 5.6E-27 score: 95.4
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 5..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0488.1	MC07g0488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity